Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 9.2e-100 367.1 211 100.0
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 5.1e-82 308.1 211 87.7
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.6e-75 286.6 212 80.7
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 3.5e-75 285.4 213 78.4
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 7.8e-75 284.3 216 79.2
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 2.8e-72 275.8 215 80.5
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 2.4e-68 262.7 215 73.0
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 2.1e-67 259.6 214 72.0
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 2.1e-67 259.6 214 72.0
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 9.9e-62 240.7 214 68.2
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 8.4e-61 237.7 229 68.6
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 5.1e-58 228.4 211 65.9
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 8.7e-58 227.6 195 65.6
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 6.2e-56 221.5 215 61.4
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 1.8e-55 219.9 225 59.1
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 3.1e-55 219.2 215 60.0
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 9.0e-55 217.6 211 58.8
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 3.4e-54 215.7 213 60.1
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 3.4e-54 215.7 213 60.1
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 4.5e-54 215.3 220 57.7
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 4.5e-54 215.3 152 71.7
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 5.8e-54 214.9 217 59.4
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.8e-54 214.9 154 73.4
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.3e-53 213.8 157 68.8
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 1.7e-53 213.4 201 60.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.7e-53 213.4 221 59.3
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 2.2e-53 213.0 211 59.7
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 2.9e-53 212.6 212 59.0
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 3.8e-53 212.2 188 63.8
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 6.5e-53 211.5 218 58.3
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 1.1e-52 210.7 219 58.9
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 1.4e-52 210.3 215 58.6
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.9e-52 209.9 215 57.2
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 2.5e-52 209.5 232 56.0
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.5e-52 209.5 164 65.2
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 2.5e-52 209.5 154 68.2
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 3.2e-52 209.1 171 64.3
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 3.2e-52 209.1 221 57.0
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 4.2e-52 208.8 216 57.9
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 4.2e-52 208.8 226 57.5
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 4.2e-52 208.8 154 70.8
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 5.5e-52 208.4 179 63.1
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 5.5e-52 208.4 211 56.9
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 5.5e-52 208.4 161 66.5
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 7.1e-52 208.0 213 57.7
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 7.1e-52 208.0 215 56.7
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 9.3e-52 207.6 216 57.4
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 9.3e-52 207.6 155 68.4
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 1.2e-51 207.2 204 58.8
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 1.6e-51 206.8 221 58.8
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 2.1e-51 206.5 215 55.8
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 2.1e-51 206.5 153 68.6
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 3.5e-51 205.7 215 60.0
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 3.5e-51 205.7 215 60.9
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.5e-51 205.7 214 57.9
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 4.6e-51 205.3 211 58.8
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 4.6e-51 205.3 221 57.0
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 4.6e-51 205.3 211 57.3
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 6.0e-51 204.9 218 59.2
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 6.0e-51 204.9 154 68.2
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 7.9e-51 204.5 176 63.6
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 1.0e-50 204.1 217 58.5
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.0e-50 204.1 189 62.4
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 1.3e-50 203.8 190 60.5
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 1.3e-50 203.8 155 67.7
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 3.0e-50 202.6 175 61.1
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 3.0e-50 202.6 211 56.4
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 3.9e-50 202.2 217 57.6
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 6.7e-50 201.4 215 57.2
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 8.7e-50 201.1 218 57.8
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 8.7e-50 201.1 169 62.7
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.1e-49 200.7 136 72.8
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.1e-49 200.7 217 56.2
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.5e-49 200.3 217 56.7
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 1.5e-49 200.3 130 77.7
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 1.9e-49 199.9 191 59.7
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 3.3e-49 199.1 165 60.6
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 3.3e-49 199.1 221 56.6
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 3.3e-49 199.1 213 56.3
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 7.4e-49 198.0 154 66.2
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 9.6e-49 197.6 191 57.6
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 1.3e-48 197.2 221 53.8
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.6e-48 196.8 219 54.8
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.6e-48 196.8 221 54.3
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 2.8e-48 196.1 152 69.1
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 6.2e-48 194.9 137 71.5
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 8.2e-48 194.5 217 54.4
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.4e-47 193.7 199 57.8
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 5.3e-47 191.8 128 73.4
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 7.6e-46 188.0 189 58.2
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.0e-45 187.6 178 57.3
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.1e-43 179.9 191 57.1
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 2.1e-43 179.9 191 55.5
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.6e-43 178.7 214 54.2
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 3.0e-42 176.0 180 50.0
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 5.7e-41 171.8 217 53.9
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 2.8e-40 169.5 130 63.1
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 4.8e-40 168.7 206 50.0
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.1e-39 167.5 215 53.0
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 1.4e-39 167.2 109 77.1
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 8.5e-37 157.9 108 73.1
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 2.7e-35 152.9 110 70.9
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 5.9e-30 135.2 167 52.7
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 7.9e-27 124.8 72 83.3
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 1.0e-26 124.4 130 55.4
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 4.4e-25 119.0 68 89.7
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 4.4e-25 119.0 68 89.7
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 4.5e-22 109.0 161 47.2
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 5.9e-22 108.6 126 41.3
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 1.7e-21 107.1 160 48.1
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 2.9e-21 106.3 147 49.0
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 6.5e-21 105.1 152 47.4
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 5.2e-18 95.5 153 45.1
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 7.7e-14 81.6 58 63.8
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 8.3e-08 61.6 52 57.7
BcaB05g21912 Brassica carinata HOM05D006610 ORTHO05D008447 2.0e-06 57.0 64 53.1


User provided reference genes

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