Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G60000 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 3.8e-84 314.7 150 100.0
AL8G36590 Arabidopsis lyrata HOM05D008865 ORTHO05D011106 1.2e-72 276.6 141 90.8
Carub.0008s2070 Capsella rubella HOM05D008865 ORTHO05D011106 8.9e-65 250.4 150 82.7
AL6G34100 Arabidopsis lyrata HOM05D008865 ORTHO05D011106 7.4e-35 151.0 139 54.7
AT5G22970 Arabidopsis thaliana HOM05D008865 ORTHO05D011106 6.2e-34 147.9 148 52.0
Carub.0006s2074 Capsella rubella HOM05D008865 ORTHO05D011106 5.3e-33 144.8 140 54.3
Thhalv10015539m.g Eutrema salsugineum HOM05D008865 ORTHO05D011106 6.9e-33 144.4 149 55.0
CARHR190570 Cardamine hirsuta HOM05D008865 ORTHO05D011106 5.8e-32 141.4 140 52.9
Aa31LG7G12520 Aethionema arabicum HOM05D008865 ORTHO05D011106 1.7e-31 139.8 150 48.0
BraA06t24016Z Brassica rapa HOM05D008865 ORTHO05D011106 2.2e-31 139.4 152 48.7
A03p10990 Brassica napus HOM05D008865 ORTHO05D011106 4.9e-31 138.3 158 50.6
BraA03t10412Z Brassica rapa HOM05D008865 ORTHO05D011106 4.9e-31 138.3 158 50.6
BraA03t10413Z Brassica rapa HOM05D008865 ORTHO05D011106 4.9e-31 138.3 158 50.6
BcaC04g19616 Brassica carinata HOM05D008865 ORTHO05D011106 6.4e-31 137.9 154 48.7
C09p53610 Brassica napus HOM05D008865 ORTHO05D011106 6.4e-31 137.9 154 48.7
BolC9t58237H Brassica oleracea HOM05D008865 ORTHO05D011106 6.4e-31 137.9 154 48.7
BcaB01g04678 Brassica carinata HOM05D008865 ORTHO05D011106 2.4e-30 136.0 158 51.3
A03p11010 Brassica napus HOM05D008865 ORTHO05D011106 4.2e-30 135.2 158 50.0
BcaB01g04681 Brassica carinata HOM05D008865 ORTHO05D011106 9.3e-30 134.0 147 53.1
A10p18060 Brassica napus HOM05D008865 ORTHO05D011106 9.3e-30 134.0 154 48.1
Sp6g22410 Schrenkiella parvula HOM05D008865 ORTHO05D011106 3.5e-29 132.1 145 49.0
BcaB08g36386 Brassica carinata HOM05D008865 ORTHO05D011106 4.6e-29 131.7 153 46.4
BcaB08g36388 Brassica carinata HOM05D008865 ORTHO05D011106 4.6e-29 131.7 153 46.4
BcaB08g36389 Brassica carinata HOM05D008865 ORTHO05D011106 4.6e-29 131.7 153 46.4
BraA10t43880Z Brassica rapa HOM05D008865 ORTHO05D011106 6.0e-29 131.3 154 47.4
THA.LOC104811283 Tarenaya hassleriana HOM05D008865 ORTHO05D011106 1.8e-28 129.8 111 53.2
BraA03t10408Z Brassica rapa HOM05D008865 ORTHO05D011106 6.2e-26 121.3 149 47.0
BcaC01g06558 Brassica carinata HOM05D008865 ORTHO05D011106 9.0e-25 117.5 158 46.2
C03p12650 Brassica napus HOM05D008865 ORTHO05D011106 9.0e-25 117.5 158 46.2
C03p12670 Brassica napus HOM05D008865 ORTHO05D011106 9.0e-25 117.5 158 46.2
BolC3t13733H Brassica oleracea HOM05D008865 ORTHO05D011106 9.0e-25 117.5 158 46.2
BraA03t10415Z Brassica rapa HOM05D008865 ORTHO05D011106 2.0e-16 89.7 76 61.8
BcaC01g06556 Brassica carinata HOM05D008865 ORTHO05D011106 3.8e-15 85.5 118 44.9
A03p10980 Brassica napus HOM05D008865 ORTHO05D011106 2.5e-14 82.8 70 62.9
BraA03t10409Z Brassica rapa HOM05D008865 ORTHO05D011106 2.5e-14 82.8 70 62.9
Thecc.09G331500 Theobroma cacao HOM05D008865 ORTHO05D011106 2.5e-14 82.8 143 35.0
BolC3t13736H Brassica oleracea HOM05D008865 ORTHO05D011106 6.1e-13 78.2 76 53.9
C03p12700 Brassica napus HOM05D008865 ORTHO05D011106 1.8e-12 76.6 76 53.9
Aa31sc23G400 Aethionema arabicum HOM05D008865 ORTHO05D011106 1.1e-06 57.4 66 53.0


User provided reference genes

Program Settings