Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 0.0e+00 1471.8 787 100.0
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 0.0e+00 1330.1 788 88.8
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 0.0e+00 1215.3 790 82.5
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 0.0e+00 1200.7 792 82.1
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 0.0e+00 1172.5 790 79.6
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 0.0e+00 1144.4 787 77.6
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 0.0e+00 1135.2 791 77.9
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 0.0e+00 1131.7 783 77.7
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 0.0e+00 1126.3 784 77.4
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 0.0e+00 1096.6 787 76.6
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 2.8e-295 1018.5 783 73.7
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 7.0e-294 1013.8 779 71.9
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 3.6e-266 921.8 812 64.3
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 1.6e-261 906.4 785 66.5
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 1.1e-233 813.9 822 57.7
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 1.5e-224 783.5 565 75.4
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 2.1e-221 773.1 551 75.9
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 2.7e-221 772.7 726 61.7
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 4.6e-213 745.3 855 51.5
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 1.8e-212 743.4 847 51.6
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 6.7e-212 741.5 853 51.6
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 7.4e-211 738.0 855 51.1
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 2.8e-210 736.1 850 52.4
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 4.8e-210 735.3 854 50.8
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.8e-209 733.4 852 51.2
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 8.5e-207 724.5 854 51.8
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.5e-206 721.8 854 50.1
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 2.1e-205 719.9 857 49.6
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 2.3e-204 716.5 827 50.4
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.5e-203 713.8 854 49.4
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 5.7e-203 711.8 828 50.2
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 5.7e-203 711.8 856 49.5
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 2.4e-201 706.4 863 48.7
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 2.4e-201 706.4 836 50.2
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 5.9e-200 701.8 852 48.5
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 2.2e-199 699.9 826 51.3
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 1.1e-198 697.6 858 48.4
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 4.7e-197 692.2 860 47.9
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 6.1e-197 691.8 835 49.8
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 6.1e-197 691.8 867 49.0
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 7.9e-197 691.4 860 48.0
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 3.9e-196 689.1 861 48.3
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 3.3e-195 686.0 895 46.5
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 3.3e-195 686.0 859 47.6
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 4.4e-195 685.6 854 47.9
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 4.8e-194 682.2 860 47.4
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 6.3e-194 681.8 842 48.2
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 8.2e-194 681.4 854 48.0
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.1e-193 681.0 862 48.7
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 1.4e-193 680.6 854 48.0
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.8e-193 680.2 847 47.7
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 6.9e-193 678.3 860 48.1
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 6.9e-193 678.3 855 47.6
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.2e-192 677.6 860 47.6
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.7e-191 673.7 863 47.5
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 9.4e-190 667.9 830 48.1
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 4.7e-189 665.6 860 47.6
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 8.0e-189 664.8 833 48.3
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 3.0e-188 662.9 813 47.8
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 8.8e-188 661.4 848 47.9
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 1.1e-187 661.0 853 47.2
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 3.3e-187 659.4 858 46.7
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 3.1e-185 652.9 829 47.6
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 3.1e-185 652.9 831 47.5
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 9.1e-185 651.4 846 46.2
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 1.2e-184 651.0 829 47.0
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.2e-184 651.0 828 47.0
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.6e-184 650.6 829 46.9
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 2.0e-184 650.2 822 47.0
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 1.0e-183 647.9 715 52.6
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.1e-182 644.4 852 46.0
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 4.7e-181 639.0 821 46.7
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 4.7e-181 639.0 1012 42.3
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 8.0e-181 638.3 830 47.0
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 5.2e-180 635.6 860 45.6
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 4.4e-179 632.5 887 45.3
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 3.7e-178 629.4 796 47.5
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 1.0e-175 621.3 840 47.0
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 3.8e-175 619.4 847 44.5
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 2.5e-174 616.7 978 41.6
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 4.2e-174 615.9 850 45.6
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 5.5e-174 615.5 847 45.1
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 7.2e-174 615.1 848 45.6
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 4.7e-173 612.5 847 44.2
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 4.0e-172 609.4 858 45.2
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 2.6e-171 606.7 841 44.5
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 5.7e-171 605.5 861 45.1
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 5.7e-171 605.5 858 45.5
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 1.8e-169 600.5 847 44.2
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 3.1e-169 599.7 858 44.8
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 1.6e-168 597.4 846 44.0
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 1.6e-168 597.4 852 43.7
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 1.0e-167 594.7 843 43.5
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 3.8e-167 592.8 790 46.2
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 4.2e-166 589.3 655 53.1
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 3.6e-165 586.3 851 43.2
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 6.1e-165 585.5 815 44.0
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 5.2e-164 582.4 815 43.8
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.7e-162 577.4 824 43.1
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 1.6e-160 570.9 697 48.4
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 4.5e-160 569.3 990 39.2
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 1.9e-158 563.9 836 42.3
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 2.5e-158 563.5 829 41.6
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.4e-156 557.8 887 41.3
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 7.5e-155 552.0 856 41.9
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 2.2e-154 550.4 800 42.0
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 4.1e-153 546.2 802 42.9
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 4.1e-153 546.2 834 42.4
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 1.2e-152 544.7 855 42.6
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 2.0e-152 543.9 884 42.2
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 2.7e-152 543.5 794 43.1
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 4.6e-152 542.7 855 41.6
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 4.6e-152 542.7 807 42.1
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 1.3e-151 541.2 852 43.1
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.6e-151 538.9 857 41.2
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 8.6e-151 538.5 847 42.7
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 6.2e-149 532.3 794 42.3
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 8.0e-149 531.9 843 41.9
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 5.8e-147 525.8 853 41.6
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 7.5e-147 525.4 810 41.0
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 2.2e-146 523.9 785 42.0
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 4.1e-145 519.6 685 44.7
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.4e-140 504.6 693 46.0
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 1.4e-140 504.6 741 42.9
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 1.5e-139 501.1 906 38.9
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.0e-139 500.7 639 46.9
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 2.0e-139 500.7 635 46.9
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 4.4e-139 499.6 822 40.6
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 9.2e-137 491.9 676 47.8
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 4.0e-132 476.5 586 47.3
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 1.2e-128 464.9 806 37.6
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 3.9e-127 459.9 640 43.8
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 6.6e-127 459.1 809 36.7
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.4e-124 451.4 879 37.4
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 9.9e-123 445.3 828 38.4
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 9.9e-123 445.3 813 35.3
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 2.1e-117 427.6 628 42.5
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 2.0e-115 421.0 611 43.9
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 7.1e-113 412.5 898 34.4
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 6.0e-112 409.5 855 36.6
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 1.9e-105 387.9 301 69.8
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 3.3e-102 377.1 781 33.5
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 1.3e-101 375.2 803 32.9
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 6.2e-101 372.9 573 41.9
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 3.1e-100 370.5 829 33.3
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 7.9e-96 355.9 660 39.2
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 5.3e-92 343.2 752 36.7
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 6.1e-88 329.7 257 70.0
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 4.1e-84 317.0 257 72.4
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 2.8e-77 294.3 446 42.2
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.1e-73 282.3 417 42.2
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 9.4e-65 252.7 194 69.6
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 4.8e-53 213.8 725 29.2
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 7.0e-52 209.9 668 28.0
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 5.0e-50 203.8 448 35.7
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 4.3e-41 174.1 331 38.1
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 8.3e-37 159.8 190 45.3
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 2.5e-33 148.3 125 55.2
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 8.9e-31 139.8 215 40.5
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.7e-29 135.6 191 39.3
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 3.7e-29 134.4 294 32.7
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.5e-27 127.9 182 45.1
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 3.0e-26 124.8 155 51.0
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 3.6e-24 117.9 167 46.7
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 4.4e-22 110.9 233 33.9
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 3.3e-17 94.7 115 47.0
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 1.1e-15 89.7 118 46.6
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 4.0e-15 87.8 109 52.3
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 3.8e-13 81.3 103 47.6
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.4e-12 78.6 85 50.6
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 3.2e-12 78.2 103 46.6
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 7.8e-11 73.6 111 40.5
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 6.6e-10 70.5 100 43.0
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 9.6e-09 66.6 94 39.4
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.3e-08 66.2 115 36.5
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 1.6e-08 65.9 53 49.1
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.6e-08 64.7 102 39.2


User provided reference genes

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