Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G18040 Arabidopsis thaliana HOM05D008365 ORTHO05D081110 5.1e-107 391.0 181 100.0
AL6G29250 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 2.2e-54 216.1 198 58.1
AL6G29230 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 8.5e-54 214.2 198 56.1
CARHR215270 Cardamine hirsuta HOM05D008365 ORTHO05D011149 2.4e-40 169.5 196 46.9
AT4G29760 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 4.1e-40 168.7 199 45.2
Carub.0004s1486 Capsella rubella HOM05D008365 ORTHO05D011149 7.0e-40 167.9 196 46.9
AL7G22500 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 9.2e-40 167.5 198 44.9
AL7G22480 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 1.0e-38 164.1 194 46.4
AL7G22490 Arabidopsis lyrata HOM05D008365 ORTHO05D011149 3.3e-37 159.1 187 45.5
AT4G29770 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 2.1e-36 156.4 196 42.3
Carub.0008s0192 Capsella rubella HOM05D008365 ORTHO05D011149 4.7e-36 155.2 193 43.5
Sp7g27580 Schrenkiella parvula HOM05D008365 ORTHO05D011149 3.7e-33 145.6 88 71.6
Carub.0004s1487 Capsella rubella HOM05D008365 ORTHO05D011149 2.7e-31 139.4 149 48.3
A08p19110 Brassica napus HOM05D008365 ORTHO05D011149 4.6e-31 138.7 86 68.6
BraA08t33873Z Brassica rapa HOM05D008365 ORTHO05D011149 6.0e-31 138.3 86 68.6
BcaB03g12656 Brassica carinata HOM05D008365 ORTHO05D011149 1.7e-30 136.7 86 66.3
C03p88570 Brassica napus HOM05D008365 ORTHO05D011149 1.5e-29 133.7 85 65.9
C03p88560 Brassica napus HOM05D008365 ORTHO05D011149 4.3e-29 132.1 176 37.5
Thhalv10027444m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 4.3e-29 132.1 188 36.7
CARHR251110 Cardamine hirsuta HOM05D008365 ORTHO05D011149 8.9e-27 124.4 194 40.2
A07p02810 Brassica napus HOM05D008365 ORTHO05D011149 1.7e-25 120.2 165 38.8
BraA07t28079Z Brassica rapa HOM05D008365 ORTHO05D011149 1.7e-25 120.2 165 38.8
A08p19120 Brassica napus HOM05D008365 ORTHO05D011149 2.2e-25 119.8 72 70.8
BcaB03g12655 Brassica carinata HOM05D008365 ORTHO05D011149 5.4e-24 115.2 85 54.1
BcaC01g01143 Brassica carinata HOM05D008365 ORTHO05D011149 7.0e-24 114.8 73 68.5
Thhalv10026005m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 7.0e-24 114.8 179 35.2
BcaC09g51862 Brassica carinata HOM05D008365 ORTHO05D011149 3.0e-22 109.4 177 36.2
BolC1t00807H Brassica oleracea HOM05D008365 ORTHO05D011149 1.1e-21 107.5 83 57.8
BraA08t33874Z Brassica rapa HOM05D008365 ORTHO05D011149 5.6e-21 105.1 194 30.9
A01p07560 Brassica napus HOM05D008365 ORTHO05D011149 2.0e-18 96.7 183 32.2
C01p08200 Brassica napus HOM05D008365 ORTHO05D011149 1.3e-17 94.0 62 64.5
BraA01t00699Z Brassica rapa HOM05D008365 ORTHO05D011149 2.2e-17 93.2 60 68.3
A08p19130 Brassica napus HOM05D008365 ORTHO05D011149 8.3e-17 91.3 194 28.9
BcaNung02965 Brassica carinata HOM05D008365 ORTHO05D011149 1.4e-16 90.5 100 46.0
C03p88590 Brassica napus HOM05D008365 ORTHO05D011149 1.9e-16 90.1 194 28.4
Carub.0001s4054 Capsella rubella HOM05D008365 ORTHO05D014862 1.0e-14 84.3 81 49.4
CARHR237670 Cardamine hirsuta HOM05D008365 ORTHO05D011149 1.0e-14 84.3 149 32.9
CARHR163030 Cardamine hirsuta HOM05D008365 ORTHO05D014862 1.3e-14 84.0 76 52.6
AL1G54760 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 3.0e-14 82.8 81 50.6
AT5G18065 Arabidopsis thaliana HOM05D008365 ORTHO05D011149 3.9e-14 82.4 130 40.8
Carub.0001s4053 Capsella rubella HOM05D008365 ORTHO05D014862 5.6e-13 78.6 76 48.7
AL1G61110 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 7.3e-13 78.2 77 50.6
Thhalv10011766m.g Eutrema salsugineum HOM05D008365 ORTHO05D011149 9.6e-13 77.8 148 33.8
AL1G59580 Arabidopsis lyrata HOM05D008365 ORTHO05D014862 2.8e-12 76.3 84 50.0
AT1G48180 Arabidopsis thaliana HOM05D008365 ORTHO05D014862 2.8e-12 76.3 77 46.8
Carub.0001s4052 Capsella rubella HOM05D008365 ORTHO05D014862 2.8e-12 76.3 76 48.7
AT1G51670 Arabidopsis thaliana HOM05D008365 ORTHO05D014862 1.1e-11 74.3 82 50.0
CARHR263650 Cardamine hirsuta HOM05D008365 ORTHO05D014862 1.1e-11 74.3 76 44.7
CARHR063260 Cardamine hirsuta HOM05D008365 ORTHO05D014862 3.1e-11 72.8 76 44.7
CARHR063690 Cardamine hirsuta HOM05D008365 ORTHO05D014862 3.4e-10 69.3 76 42.1
CARHR063700 Cardamine hirsuta HOM05D008365 ORTHO05D014862 1.3e-09 67.4 84 39.3
BcaC09g51771 Brassica carinata HOM05D016251 ORTHO05D017520 2.9e-09 66.2 81 40.7
BcaC09g52200 Brassica carinata HOM05D016251 ORTHO05D017520 1.4e-08 63.9 81 40.7
A01p08230 Brassica napus HOM05D016251 ORTHO05D017520 1.4e-08 63.9 81 40.7
C01p09200 Brassica napus HOM05D016251 ORTHO05D017520 1.4e-08 63.9 81 40.7
BraA01t00768Z Brassica rapa HOM05D016251 ORTHO05D017520 1.4e-08 63.9 81 40.7


User provided reference genes

Program Settings