Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT5G09310 Arabidopsis thaliana HOM05D006465 ORTHO05D008207 1.8e-73 279.3 147 100.0
AL6G19700 Arabidopsis lyrata HOM05D006465 ORTHO05D008207 2.5e-72 275.4 147 96.6
Carub.0006s0786 Capsella rubella HOM05D006465 ORTHO05D008207 9.6e-72 273.5 147 95.2
Thhalv10014951m.g Eutrema salsugineum HOM05D006465 ORTHO05D008207 6.0e-66 254.2 147 86.4
CARHR204090 Cardamine hirsuta HOM05D006465 ORTHO05D008207 1.1e-64 250.0 147 85.0
BcaB08g37219 Brassica carinata HOM05D006465 ORTHO05D008207 1.5e-64 249.6 147 83.7
BolC3t12987H Brassica oleracea HOM05D006465 ORTHO05D008207 2.8e-63 245.4 146 83.6
A10p27930 Brassica napus HOM05D006465 ORTHO05D008207 6.3e-63 244.2 147 82.3
C03p04560 Brassica napus HOM05D006465 ORTHO05D008207 6.3e-63 244.2 146 82.2
A03p04100 Brassica napus HOM05D006465 ORTHO05D008207 8.2e-63 243.8 146 82.9
BraA03t09753Z Brassica rapa HOM05D006465 ORTHO05D008207 8.2e-63 243.8 146 82.9
BraA10t44842Z Brassica rapa HOM05D006465 ORTHO05D008207 8.2e-63 243.8 147 81.0
Sp6g34010 Schrenkiella parvula HOM05D006465 ORTHO05D008207 8.2e-63 243.8 147 81.6
Aa31LG3G17710 Aethionema arabicum HOM05D003132 ORTHO05D003736 9.4e-59 230.3 140 79.3
THA.LOC104800074 Tarenaya hassleriana HOM05D006465 ORTHO05D008207 7.9e-58 227.3 147 76.9
Potri.005G063100 Populus trichocarpa HOM05D006465 ORTHO05D008207 5.5e-51 204.5 141 68.8
Manes.03G123050 Manihot esculenta HOM05D006465 ORTHO05D008207 1.6e-50 203.0 116 78.4
Thecc.01G132600 Theobroma cacao HOM05D006465 ORTHO05D008207 2.7e-50 202.2 116 76.7
Hund23271 Selenicereus undatus HOM05D006465 ORTHO05D008207 4.7e-50 201.4 144 67.4
MD07G1057500 Malus domestica HOM05D006465 ORTHO05D008207 7.9e-50 200.7 148 66.9
CiPaw.04G082200 Carya illinoinensis HOM05D006465 ORTHO05D008207 2.3e-49 199.1 116 74.1
Sabra05G0052300 Salix brachista HOM05D006465 ORTHO05D008207 3.9e-49 198.4 116 75.9
TWI79G1280 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 5.1e-49 198.0 116 75.0
Duzib187G1992 Durio zibethinus HOM05D006465 ORTHO05D008207 1.5e-48 196.4 116 74.1
TWI75G0808 Tripterygium wilfordii HOM05D006465 ORTHO05D008207 2.0e-48 196.1 116 75.0
Psat5g062320 Pisum sativum HOM05D006465 ORTHO05D008207 2.6e-48 195.7 141 66.7
Glyma.06G153700 Glycine max HOM05D006465 ORTHO05D008207 9.7e-48 193.7 116 75.9
Dinv07122 Davidia involucrata HOM05D006465 ORTHO05D008207 1.3e-47 193.4 139 66.9
Gohir.A05G384500 Gossypium hirsutum HOM05D005188 ORTHO05D006153 1.3e-47 193.4 117 74.4
CANSAT01G2296 Cannabis sativa HOM05D006465 ORTHO05D008207 2.2e-47 192.6 115 76.5
Haze_25235 Corylus avellana HOM05D006465 ORTHO05D008207 2.2e-47 192.6 134 66.4
Gohir.D04G031000 Gossypium hirsutum HOM05D006465 ORTHO05D008207 2.8e-47 192.2 117 73.5
Gorai.012G035200 Gossypium raimondii HOM05D005188 ORTHO05D006153 2.8e-47 192.2 117 73.5
FvH4_2g08820 Fragaria vesca HOM05D006465 ORTHO05D008207 4.8e-47 191.4 144 65.3
FAN10G0435 Fragaria x ananassa HOM05D006465 ORTHO05D008207 4.8e-47 191.4 144 65.3
FAN15G0521 Fragaria x ananassa HOM05D006465 ORTHO05D008207 4.8e-47 191.4 144 65.3
Prupe.4G271100 Prunus persica HOM05D006465 ORTHO05D008207 6.3e-47 191.0 148 62.8
Hma1.2p1_0476F.1_g160840 Hydrangea macrophylla HOM05D006465 ORTHO05D008207 1.1e-46 190.3 111 77.5
Ciclev10002814m.g Citrus clementina HOM05D006465 ORTHO05D008207 1.8e-46 189.5 146 62.3
RcHm_v2.0_Chr6g0264391 Rosa chinensis HOM05D006465 ORTHO05D008207 2.4e-46 189.1 112 75.0
Ca_16948_v3 Cicer arietinum L. HOM05D002517 ORTHO05D003040 3.1e-46 188.7 114 75.4
Ca_16968_v3 Cicer arietinum L. HOM05D006465 ORTHO05D008207 3.1e-46 188.7 114 75.4
PGR119G2011 Punica granatum HOM05D006465 ORTHO05D008207 3.1e-46 188.7 144 67.4
TPR.G28231 Trifolium pratense HOM05D006465 ORTHO05D008207 3.1e-46 188.7 146 62.3
Medtr3g096320 Medicago truncatula HOM05D006465 ORTHO05D008207 4.1e-46 188.3 111 76.6
Glyma.04G212600 Glycine max HOM05D006465 ORTHO05D008207 9.1e-46 187.2 116 73.3
Sc07g0001830 Simmondsia chinensis HOM05D006465 ORTHO05D008207 1.2e-45 186.8 107 78.5
Lalb_Chr08g0238351 Lupinus albus HOM05D006465 ORTHO05D008207 1.5e-45 186.4 111 78.4
Ah.02g121490 Amaranthus hybridus HOM05D006465 ORTHO05D008207 2.0e-45 186.0 142 64.1
Atru.chr4.901 Acer truncatum HOM05D006465 ORTHO05D008207 3.4e-45 185.3 135 63.7
EL10Ac6g15303 Beta vulgaris HOM05D006465 ORTHO05D008207 4.5e-45 184.9 114 73.7
AUR62017880 Chenopodium quinoa HOM05D006465 ORTHO05D008207 4.5e-45 184.9 107 78.5
AUR62003565 Chenopodium quinoa HOM05D006465 ORTHO05D008207 7.7e-45 184.1 107 76.6
vmacro12798 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 1.3e-44 183.3 119 72.3
Sed0005537 Sechium edule HOM05D006465 ORTHO05D008207 1.7e-44 183.0 110 74.5
arahy.Tifrunner.gnm1.ann1.X6LXMM Arachis hypogaea HOM05D006465 ORTHO05D008207 2.2e-44 182.6 124 69.4
Phvul.009G150900 Phaseolus vulgaris HOM05D006465 ORTHO05D008207 2.2e-44 182.6 115 72.2
TAR381G0246 Trochodendron aralioides HOM05D006465 ORTHO05D008207 2.2e-44 182.6 108 76.9
CsaV3_2G018330 Cucumis sativus L. HOM05D006465 ORTHO05D008207 2.9e-44 182.2 117 74.4
Dinv24364 Davidia involucrata HOM05D006465 ORTHO05D008207 2.9e-44 182.2 110 74.5
Lj1g0025116 Lotus japonicus HOM05D006465 ORTHO05D008207 6.5e-44 181.0 146 61.6
ClCG02G000500 Citrullus lanatus HOM05D006465 ORTHO05D008207 8.5e-44 180.6 110 76.4
Nn5g28548 Nelumbo nucifera HOM05D006465 ORTHO05D008207 8.5e-44 180.6 109 75.2
Aqoxy5G02229 Aquilegia oxysepala HOM05D006465 ORTHO05D000054 1.4e-43 179.9 108 73.1
CSS0043698 Camellia sinensis var. sinensis HOM05D006465 ORTHO05D008207 1.9e-43 179.5 107 73.8
Actinidia06618 Actinidia chinensis HOM05D006465 ORTHO05D008207 2.5e-43 179.1 112 71.4
arahy.Tifrunner.gnm1.ann1.Q2CXKS Arachis hypogaea HOM05D006465 ORTHO05D008207 2.5e-43 179.1 143 61.5
TAR625G1289 Trochodendron aralioides HOM05D006465 ORTHO05D008207 3.2e-43 178.7 108 75.0
VMungo1309G0274 Vigna mungo HOM05D006465 ORTHO05D008207 4.2e-43 178.3 136 61.0
GSVIVG01026483001 Vitis vinifera HOM05D006465 ORTHO05D008207 1.2e-42 176.8 107 73.8
PSO017G4081 Papaver somniferum HOM05D006465 ORTHO05D008207 2.1e-42 176.0 108 73.1
Lsat_1_v5_gn_9_25981 Lactuca sativa HOM05D006465 ORTHO05D008207 4.7e-42 174.9 117 68.4
Lj4A839G53 Lonicera japonica HOM05D006465 ORTHO05D008207 6.1e-42 174.5 107 71.0
Nitab4.5_0000181g0060 Nicotiana tabacum HOM05D006465 ORTHO05D008207 8.0e-42 174.1 109 73.4
Peaxi162Scf00270g01115 Petunia axillaris HOM05D006465 ORTHO05D008207 1.0e-41 173.7 109 72.5
HanXRQChr15g0491331 Helianthus annuus HOM05D006465 ORTHO05D008207 1.8e-41 172.9 108 72.2
Sopen06g005870 Solanum pennellii HOM05D006465 ORTHO05D008207 2.3e-41 172.6 109 69.7
PGSC0003DMG400030138 Solanum tuberosum HOM05D006465 ORTHO05D008207 2.3e-41 172.6 109 69.7
CDE04G1235 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 3.0e-41 172.2 107 70.1
PSO170G5905 Papaver somniferum HOM05D006465 ORTHO05D008207 3.0e-41 172.2 108 70.4
CAN.G934.1 Capsicum annuum HOM05D006465 ORTHO05D008207 5.2e-41 171.4 109 70.6
FAN24G0187 Fragaria x ananassa HOM05D006465 ORTHO05D008207 2.0e-40 169.5 133 63.2
Hund04414 Selenicereus undatus HOM05D006465 ORTHO05D008207 4.4e-40 168.3 197 47.2
Cc07_g18520 Coffea canephora HOM05D006465 ORTHO05D008207 7.4e-40 167.5 109 70.6
ECA247G0944 Erigeron canadensis HOM05D006465 ORTHO05D008207 3.7e-39 165.2 116 69.8
QL10p043584 Quercus lobata HOM05D006465 ORTHO05D008207 3.7e-39 165.2 183 47.0
Oeu004242.1 Olea europaea HOM05D006465 ORTHO05D008207 8.2e-39 164.1 111 68.5
HPP92_019397 Vanilla planifolia HOM05D006465 ORTHO05D008207 2.4e-38 162.5 111 66.7
DCAR_014336 Daucus carota HOM05D006465 ORTHO05D008207 5.3e-38 161.4 109 67.0
MELO3C023238.2 Cucumis melo HOM05D006465 ORTHO05D008207 9.1e-38 160.6 136 60.3
FvH4_3g04510 Fragaria vesca HOM05D006465 ORTHO05D008207 1.6e-37 159.8 97 74.2
FAN11G3155 Fragaria x ananassa HOM05D006465 ORTHO05D008207 1.6e-37 159.8 97 75.3
Migut.L00880 Erythranthe guttata HOM05D006465 ORTHO05D008207 2.6e-37 159.1 110 63.6
MSTRG.3605 Avicennia marina HOM05D006465 ORTHO05D008207 3.5e-37 158.7 109 66.1
Migut.L00965 Erythranthe guttata HOM05D006465 ORTHO05D008207 7.7e-37 157.5 110 64.5
unitig_88.g27767 Utricularia gibba HOM05D006465 ORTHO05D008207 5.0e-36 154.8 114 60.5
Oeu050125.1 Olea europaea HOM05D006465 ORTHO05D008207 6.5e-36 154.5 117 62.4
ATR0138G005 Amborella trichopoda HOM05D006465 ORTHO05D008207 3.2e-35 152.1 112 61.6
AagrBONN_evm.TU.Sc2ySwM_117.2181 Anthoceros agrestis HOM05D006465 ORTHO05D008207 3.2e-35 152.1 116 57.8
SGA_v2.0_scaffold19G08773 Striga asiatica HOM05D006465 ORTHO05D008207 2.7e-34 149.1 110 62.7
SalBow7G2903 Salvia bowleyana HOM05D006465 ORTHO05D008207 8.0e-34 147.5 133 55.6
Os01g0960000 Oryza sativa ssp. japonica HOM05D006465 ORTHO05D008207 1.4e-33 146.7 114 61.4
Zm00001eb362550 Zea mays HOM05D006465 ORTHO05D008207 1.8e-33 146.4 112 60.7
Pp3c15_3010 Physcomitrium patens HOM05D006465 ORTHO05D008207 4.5e-29 131.7 124 50.0
Mapoly0113s0017 Marchantia polymorpha HOM05D006465 ORTHO05D008207 1.1e-27 127.1 105 50.5
MD02G1262600 Malus domestica HOM05D006465 ORTHO05D008207 1.4e-25 120.2 96 61.5
SMO367G0154 Selaginella moellendorffii HOM05D006465 ORTHO05D008207 2.0e-24 116.3 107 52.3
Potri.007G106200 Populus trichocarpa HOM05D006465 ORTHO05D008207 1.4e-22 110.2 88 63.6
SEGI_17702 Sequoiadendron giganteum HOM05D006465 ORTHO05D008207 4.5e-21 105.1 96 54.2
BolC9t59563H Brassica oleracea HOM05D006465 ORTHO05D008207 1.0e-17 94.0 48 95.8
Solyc06g016760.3 Solanum lycopersicum HOM05D006465 ORTHO05D008207 1.0e-17 94.0 57 68.4
CDE12G0205 Ceratophyllum demersum HOM05D006465 ORTHO05D008207 7.5e-16 87.8 58 60.3
CBR_g29852 Chara braunii HOM05D006465 ORTHO05D008207 7.5e-16 87.8 107 40.2
Lalb_Chr11g0068481 Lupinus albus HOM05D006465 ORTHO05D008207 1.4e-14 83.6 49 77.6
vmacro20733 Vaccinium macrocarpon HOM05D006465 ORTHO05D008207 5.4e-14 81.6 73 57.5
Rhsim10G0133300 Rhododendron simsii HOM05D006465 ORTHO05D008207 5.9e-13 78.2 50 72.0
Lj4A838T21 Lonicera japonica HOM05D006465 ORTHO05D008207 6.6e-12 74.7 50 68.0
Lalb_Chr11g0068471 Lupinus albus HOM05D006465 ORTHO05D008207 6.6e-12 74.7 48 70.8
Eucgr.I00202 Eucalyptus grandis HOM05D006465 ORTHO05D008207 2.5e-11 72.8 47 70.2
Cc00_g19040 Coffea canephora HOM05D006465 ORTHO05D008207 2.8e-10 69.3 48 66.7
Cc00_g31500 Coffea canephora HOM05D006465 ORTHO05D008207 8.0e-10 67.8 47 66.0
Cre07.g323050 Chlamydomonas reinhardtii HOM05D006465 ORTHO05D008207 7.5e-08 61.2 91 35.2
PRCOL_00001485 Prasinoderma coloniale HOM05D006465 ORTHO05D008207 1.7e-07 60.1 87 41.4


User provided reference genes

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