Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT2G21820 Arabidopsis thaliana HOM05D007547 ORTHO05D009590 1.3e-35 152.5 79 100.0
AL4G11130 Arabidopsis lyrata HOM05D007547 ORTHO05D009590 1.9e-34 148.7 79 97.5
Carub.0004s0086 Capsella rubella HOM05D007547 ORTHO05D009590 3.3e-34 147.9 79 96.2
CARHR072880 Cardamine hirsuta HOM05D007547 ORTHO05D009590 3.3e-34 147.9 79 96.2
Sp5g34290 Schrenkiella parvula HOM05D007547 ORTHO05D009590 5.6e-34 147.1 78 96.2
Thhalv10019600m.g Eutrema salsugineum HOM05D007547 ORTHO05D009590 9.5e-34 146.4 79 94.9
A07p27220 Brassica napus HOM05D007547 ORTHO05D009590 8.1e-33 143.3 79 93.7
BraA07t30366Z Brassica rapa HOM05D007547 ORTHO05D009590 8.1e-33 143.3 79 93.7
BcaC08g45367 Brassica carinata HOM05D007547 ORTHO05D009590 4.0e-32 141.0 79 92.4
BolC6t38159H Brassica oleracea HOM05D007547 ORTHO05D009590 8.9e-32 139.8 79 91.1
BraA07t31944Z Brassica rapa HOM05D007547 ORTHO05D009590 2.6e-31 138.3 79 88.6
Aa31LG4G1780 Aethionema arabicum HOM05D007547 ORTHO05D009590 5.8e-31 137.1 79 88.6
BcaC08g47491 Brassica carinata HOM05D007547 ORTHO05D009590 7.6e-31 136.7 79 87.3
C06p53150 Brassica napus HOM05D007547 ORTHO05D009590 7.6e-31 136.7 79 87.3
BolC6t40331H Brassica oleracea HOM05D007547 ORTHO05D009590 7.6e-31 136.7 79 87.3
THA.LOC104808152 Tarenaya hassleriana HOM05D007547 ORTHO05D009590 3.5e-28 127.9 79 84.8
Migut.M01490 Erythranthe guttata HOM05D007547 ORTHO05D009590 7.8e-28 126.7 79 81.0
MELO3C026033.2 Cucumis melo HOM05D007547 ORTHO05D009590 3.9e-27 124.4 79 79.7
ClCG04G006620 Citrullus lanatus HOM05D007547 ORTHO05D009590 5.1e-27 124.0 79 79.7
Phvul.005G044200 Phaseolus vulgaris HOM05D007547 ORTHO05D009590 5.1e-27 124.0 79 77.2
Lj3g0009805 Lotus japonicus HOM05D007547 ORTHO05D009590 6.6e-27 123.6 79 78.5
Psat1g131000 Pisum sativum HOM05D007547 ORTHO05D009590 8.7e-27 123.2 79 75.9
Ca_03316_v3 Cicer arietinum L. HOM05D007547 ORTHO05D009590 1.1e-26 122.9 79 75.9
QL04p096363 Quercus lobata HOM05D007547 ORTHO05D009590 1.1e-26 122.9 77 76.6
Sed0025991 Sechium edule HOM05D007547 ORTHO05D009590 1.5e-26 122.5 79 77.2
C06p29990 Brassica napus HOM05D007547 ORTHO05D009590 1.9e-26 122.1 68 91.2
Medtr2g062800 Medicago truncatula HOM05D007547 ORTHO05D009590 2.5e-26 121.7 78 75.6
SalBow8G1259 Salvia bowleyana HOM05D007547 ORTHO05D009590 2.5e-26 121.7 84 77.4
CANSAT56G0291 Cannabis sativa HOM05D007547 ORTHO05D009590 3.3e-26 121.3 77 74.0
Nn1g09847 Nelumbo nucifera HOM05D007547 ORTHO05D009590 3.3e-26 121.3 78 78.2
QL04p096330 Quercus lobata HOM05D007547 ORTHO05D009590 3.3e-26 121.3 77 76.6
MD05G1241500 Malus domestica HOM05D007547 ORTHO05D009590 4.3e-26 120.9 79 74.7
TPR.G3626 Trifolium pratense HOM05D007547 ORTHO05D009590 4.3e-26 120.9 79 74.7
CSS0011642 Camellia sinensis var. sinensis HOM05D007547 ORTHO05D009590 7.3e-26 120.2 79 77.2
TAR624G0069 Trochodendron aralioides HOM05D007547 ORTHO05D009590 9.6e-26 119.8 77 79.2
DCAR_013700 Daucus carota HOM05D007547 ORTHO05D009590 1.2e-25 119.4 79 74.7
MBI07_g10939_MAGBIO Magnolia biondii HOM05D005219 ORTHO05D006451 1.6e-25 119.0 77 77.9
Glyma.08G160800 Glycine max HOM05D007547 ORTHO05D009590 2.1e-25 118.6 79 74.7
Aqoxy1G00763 Aquilegia oxysepala HOM05D007547 ORTHO05D009590 2.8e-25 118.2 79 77.2
Lalb_Chr25g0284091 Lupinus albus HOM05D007547 ORTHO05D009590 4.7e-25 117.5 79 74.7
Potri.010G176200 Populus trichocarpa HOM05D007547 ORTHO05D009590 6.2e-25 117.1 78 75.6
CsaV3_4G026690 Cucumis sativus L. HOM05D007547 ORTHO05D009590 8.1e-25 116.7 74 78.4
QL04p096133 Quercus lobata HOM05D007547 ORTHO05D009590 1.8e-24 115.5 77 74.0
TWI59G1298 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 2.4e-24 115.2 79 77.2
Cpa.g.sc118.6 Carica papaya HOM05D007547 ORTHO05D009590 3.1e-24 114.8 80 75.0
Nitab4.5_0003384g0040 Nicotiana tabacum HOM05D007547 ORTHO05D009590 3.1e-24 114.8 79 75.9
RcHm_v2.0_Chr5g0022881 Rosa chinensis HOM05D007547 ORTHO05D009590 5.2e-24 114.0 78 71.8
FAN16G2958 Fragaria x ananassa HOM05D007547 ORTHO05D009590 1.2e-23 112.8 79 69.6
Manes.11G079000 Manihot esculenta HOM05D007547 ORTHO05D009590 1.2e-23 112.8 78 71.8
CDE06G1569 Ceratophyllum demersum HOM05D000146 ORTHO05D000178 2.0e-23 112.1 77 72.7
FAN11G3189 Fragaria x ananassa HOM05D007547 ORTHO05D009590 7.6e-23 110.2 77 68.8
Peaxi162Scf00479g00092 Petunia axillaris HOM05D007547 ORTHO05D009590 7.6e-23 110.2 80 71.2
PSO541G4573 Papaver somniferum HOM05D007547 ORTHO05D009590 9.9e-23 109.8 88 72.7
HPP92_021471 Vanilla planifolia HOM05D007547 ORTHO05D009590 9.9e-23 109.8 81 71.6
Eucgr.F04485 Eucalyptus grandis HOM05D007547 ORTHO05D009590 1.3e-22 109.4 90 65.6
PGSC0003DMG400018766 Solanum tuberosum HOM05D007547 ORTHO05D009590 1.3e-22 109.4 79 70.9
unitig_26.g10053 Utricularia gibba HOM05D007547 ORTHO05D009590 1.7e-22 109.0 78 73.1
Nitab4.5_0009717g0010 Nicotiana tabacum HOM05D007547 ORTHO05D009590 2.9e-22 108.2 80 72.5
Ah.11g039500 Amaranthus hybridus HOM05D007547 ORTHO05D009590 8.4e-22 106.7 81 71.6
Haze_18453 Corylus avellana HOM05D007547 ORTHO05D009147 8.4e-22 106.7 75 73.3
Solyc03g046380.1 Solanum lycopersicum HOM05D007547 ORTHO05D009590 1.9e-21 105.5 79 69.6
Thecc.10G021200 Theobroma cacao HOM05D007547 ORTHO05D009590 3.2e-21 104.8 82 64.6
Nitab4.5_0001982g0020 Nicotiana tabacum HOM05D007547 ORTHO05D009590 4.2e-21 104.4 80 68.8
Sopen03g010530 Solanum pennellii HOM05D007547 ORTHO05D009590 4.2e-21 104.4 79 68.4
Gohir.D05G303200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 5.4e-21 104.0 81 66.7
Gorai.009G322400 Gossypium raimondii HOM05D007547 ORTHO05D009590 5.4e-21 104.0 81 66.7
CAN.G497.31 Capsicum annuum HOM05D007547 ORTHO05D009590 1.2e-20 102.8 80 68.8
PGR031G1160 Punica granatum HOM05D007547 ORTHO05D009590 1.2e-20 102.8 80 67.5
EL10Ac1g02249 Beta vulgaris HOM05D007547 ORTHO05D009590 1.6e-20 102.4 83 68.7
BcaB02g07207 Brassica carinata HOM05D007547 ORTHO05D009590 2.1e-20 102.1 79 70.9
COL.COLO4_25679 Corchorus olitorius HOM05D007547 ORTHO05D009590 2.7e-20 101.7 80 62.5
Gohir.A06G138100 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.5e-20 101.3 81 63.0
Gohir.A07G180700 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.6e-20 100.9 81 63.0
Gohir.D03G067200 Gossypium hirsutum HOM05D007547 ORTHO05D009590 4.6e-20 100.9 81 63.0
Sc15g0005120 Simmondsia chinensis HOM05D007547 ORTHO05D009590 4.6e-20 100.9 82 70.7
Gorai.008G081200 Gossypium raimondii HOM05D007547 ORTHO05D009590 6.0e-20 100.5 81 64.2
Atru.chr1.6 Acer truncatum HOM05D007547 ORTHO05D009590 7.8e-20 100.1 81 67.9
Gohir.A02G145400 Gossypium hirsutum HOM05D007547 ORTHO05D009590 1.0e-19 99.8 81 61.7
Lalb_Chr25g0284071 Lupinus albus HOM05D007547 ORTHO05D009590 1.3e-19 99.4 77 67.5
Gohir.A05G237600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.3e-19 98.6 81 61.7
Gohir.D03G007300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.3e-19 98.6 81 61.7
Gohir.D11G227600 Gossypium hirsutum HOM05D007547 ORTHO05D009590 2.3e-19 98.6 81 61.7
Gohir.A11G192300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.9e-19 97.8 81 61.7
TWI38G1141 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 3.9e-19 97.8 82 65.9
TWI38G2170 Tripterygium wilfordii HOM05D007547 ORTHO05D009590 3.9e-19 97.8 82 65.9
GSVIVG01036687001 Vitis vinifera HOM05D007547 ORTHO05D009590 5.1e-19 97.4 63 77.8
CDE02G1937 Ceratophyllum demersum HOM05D007547 ORTHO05D009590 8.7e-19 96.7 77 68.8
AUR62035430 Chenopodium quinoa HOM05D007547 ORTHO05D009590 8.7e-19 96.7 83 67.5
AUR62035713 Chenopodium quinoa HOM05D007547 ORTHO05D009590 1.5e-18 95.9 83 66.3
ECA234G4113 Erigeron canadensis HOM05D007547 ORTHO05D009590 1.3e-17 92.8 90 58.9
Lsat_1_v5_gn_5_102841 Lactuca sativa HOM05D007547 ORTHO05D009590 1.6e-17 92.4 90 58.9
Ciclev10007105m.g Citrus clementina HOM05D007547 ORTHO05D009590 8.1e-17 90.1 90 61.1
Peaxi162Scf00020g01922 Petunia axillaris HOM05D007547 ORTHO05D009590 1.8e-16 89.0 65 72.3
Gohir.A05G304300 Gossypium hirsutum HOM05D007547 ORTHO05D009590 3.1e-16 88.2 73 61.6
Rhsim04G0026600 Rhododendron simsii HOM05D007547 ORTHO05D009590 6.9e-16 87.0 81 64.2
Os08g0385000 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 7.6e-15 83.6 89 53.9
AL2G39720 Arabidopsis lyrata HOM05D000005 ORTHO05D000012 1.9e-13 79.0 47 87.2
Zm00001eb055260 Zea mays HOM05D007547 ORTHO05D009590 2.4e-13 78.6 96 50.0
Os01g0654400 Oryza sativa ssp. japonica HOM05D007547 ORTHO05D009590 2.7e-12 75.1 82 52.4
Mapoly0106s0030 Marchantia polymorpha HOM05D007547 ORTHO05D009590 1.4e-08 62.8 85 48.2
SMO145G0072 Selaginella moellendorffii HOM05D007547 ORTHO05D009590 6.9e-08 60.5 81 51.9
Duzib114G0968 Durio zibethinus HOM05D000021 ORTHO05D000010 7.6e-07 57.0 49 61.2


User provided reference genes

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