Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 0.0e+00 1646.7 902 100.0
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 0.0e+00 1488.0 889 92.7
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 0.0e+00 1412.9 910 86.8
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 0.0e+00 1353.2 908 83.0
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 0.0e+00 1310.8 909 80.4
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 0.0e+00 1266.9 903 77.9
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 0.0e+00 1224.5 904 76.9
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 0.0e+00 1218.4 909 76.0
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 0.0e+00 1188.7 907 75.0
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 0.0e+00 1181.0 913 74.4
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 0.0e+00 1162.1 911 71.8
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 0.0e+00 1083.6 949 67.1
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 2.9e-296 1021.9 902 67.3
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 1.3e-272 943.3 954 59.7
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 7.3e-263 911.0 945 57.2
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 9.9e-260 900.6 951 56.2
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 9.6e-255 884.0 942 55.4
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 6.2e-254 881.3 938 56.1
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 1.1e-253 880.6 942 56.1
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 1.2e-252 877.1 912 57.6
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 3.2e-250 869.0 1002 54.7
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 6.6e-248 861.3 951 56.3
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 1.3e-246 857.1 941 56.2
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 8.1e-246 854.4 948 55.7
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 1.4e-245 853.6 947 55.2
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 1.2e-244 850.5 943 56.2
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 4.4e-244 848.6 943 55.6
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 6.4e-243 844.7 929 54.9
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 1.7e-240 836.6 923 55.4
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 1.5e-239 833.6 901 56.2
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 4.3e-239 832.0 936 54.8
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 7.4e-239 831.2 956 54.5
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 8.1e-238 827.8 939 56.3
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 9.9e-236 820.8 948 55.3
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 1.3e-235 820.5 941 54.8
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 9.3e-234 814.3 946 55.3
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 1.1e-231 807.4 943 54.3
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 3.3e-231 805.8 932 53.9
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 2.6e-228 796.2 932 53.2
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 1.1e-226 790.8 1073 48.5
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 1.9e-226 790.0 914 53.8
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 1.9e-226 790.0 947 51.4
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 2.5e-226 789.6 931 53.9
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 3.2e-226 789.3 887 54.8
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 4.2e-226 788.9 922 53.8
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 5.5e-226 788.5 887 54.7
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 5.5e-226 788.5 888 53.2
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 7.1e-226 788.1 918 52.0
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 1.2e-225 787.3 847 57.1
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 4.6e-225 785.4 936 51.7
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 4.6e-225 785.4 931 53.9
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 6.0e-225 785.0 959 49.8
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 6.0e-225 785.0 912 53.7
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 7.9e-225 784.6 933 52.7
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 1.8e-224 783.5 966 54.1
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.5e-223 780.4 953 51.0
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 4.3e-223 778.9 927 52.1
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 5.7e-223 778.5 943 53.2
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 3.7e-222 775.8 848 54.8
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 3.1e-221 772.7 938 51.6
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 1.5e-220 770.4 944 52.4
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 2.6e-220 769.6 953 50.3
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 4.5e-220 768.8 937 52.1
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 1.7e-219 766.9 952 51.7
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 2.5e-218 763.1 962 52.1
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 3.2e-218 762.7 935 51.7
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 2.7e-217 759.6 939 52.2
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 3.6e-217 759.2 954 51.2
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 7.9e-217 758.1 967 50.7
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 7.9e-217 758.1 944 52.1
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 1.0e-216 757.7 887 53.3
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.0e-216 757.7 944 51.7
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 8.7e-216 754.6 922 52.5
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 1.5e-215 753.8 941 52.5
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 2.5e-215 753.1 941 51.4
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 2.8e-214 749.6 945 51.2
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 1.8e-213 746.9 954 50.2
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 4.1e-213 745.7 940 49.8
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 2.6e-212 743.0 938 50.9
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 7.7e-212 741.5 955 52.1
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 8.5e-211 738.0 935 50.2
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 7.2e-210 734.9 943 50.8
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 4.6e-209 732.3 938 50.4
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 2.3e-208 729.9 936 48.1
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 1.5e-207 727.2 944 50.3
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 2.0e-204 716.8 922 49.9
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 2.5e-202 709.9 1023 47.6
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 7.2e-202 708.4 849 52.5
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 4.4e-199 699.1 891 51.0
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 1.1e-197 694.5 956 48.8
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 1.8e-197 693.7 925 49.1
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 7.7e-196 688.3 938 48.4
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 7.5e-191 671.8 870 49.2
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 6.3e-182 642.1 793 52.1
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 2.3e-155 553.9 945 40.5
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 4.0e-152 543.1 442 62.0
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 5.6e-146 522.7 968 38.6
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 5.2e-144 516.2 943 39.4
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 9.9e-143 511.9 393 65.9
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 9.3e-133 478.8 694 48.8
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 2.7e-116 424.1 603 45.6
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 6.0e-116 422.9 583 49.4
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 4.0e-112 410.2 911 37.2
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 3.0e-107 394.0 626 48.7
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 1.0e-102 379.0 516 51.9
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 8.2e-89 332.8 478 45.8
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 1.8e-83 315.1 618 39.3
TAR623G1540 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.6e-76 292.0 263 58.2
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 5.7e-58 230.3 192 62.5
HPP92_012262 Vanilla planifolia HOM05D004844 ORTHO05D008684 1.7e-57 228.8 261 48.7
SEGI_13774 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.8e-57 228.0 261 47.1
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 2.8e-57 228.0 317 51.1
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.8e-52 211.5 395 40.3
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 1.4e-51 209.1 942 27.6
Haze_11873 Corylus avellana HOM05D004844 ORTHO05D006036 5.2e-51 207.2 273 51.3
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 4.9e-49 200.7 316 45.9
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.4e-48 199.1 321 44.5
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 3.3e-45 188.0 1140 25.9
HPP92_012261 Vanilla planifolia HOM05D004844 ORTHO05D006036 6.2e-44 183.7 365 40.5
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 1.7e-30 139.0 233 43.3
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 1.2e-28 132.9 99 64.6
BolC2t08646H Brassica oleracea HOM05D004844 ORTHO05D006036 2.1e-28 132.1 90 76.7
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 8.1e-28 130.2 325 39.1
C02p25770 Brassica napus HOM05D004844 ORTHO05D006036 1.1e-27 129.8 90 75.6
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 3.8e-25 121.3 114 56.1
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 3.2e-24 118.2 656 23.8
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 6.0e-23 114.0 108 55.6
SEGI_26642 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 5.6e-21 107.5 135 45.9
Actinidia04686 Actinidia chinensis HOM05D004844 ORTHO05D006036 7.3e-21 107.1 96 61.5
Actinidia04727 Actinidia chinensis HOM05D004844 ORTHO05D006036 9.6e-21 106.7 107 57.0
SEGI_11983 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.2e-20 106.3 132 43.9
Cfa022757 Carpinus fangiana HOM05D004844 ORTHO05D126324 3.6e-20 104.8 773 23.2
Actinidia04685 Actinidia chinensis HOM05D004844 ORTHO05D006036 4.7e-20 104.4 84 67.9
Oeu048129.1 Olea europaea HOM05D004844 ORTHO05D006036 6.2e-20 104.0 334 37.1
SEGI_15727 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 8.4e-17 93.6 113 49.6
MD13G1058800 Malus domestica HOM05D004844 ORTHO05D006036 7.8e-15 87.0 72 65.3
Rhsim04G0143200 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.0e-14 86.7 69 68.1
Rhsim04G0142900 Rhododendron simsii HOM05D004844 ORTHO05D006036 1.1e-13 83.2 56 75.0
unitig_62.g23698 Utricularia gibba HOM05D004844 ORTHO05D006036 3.1e-11 75.1 243 32.9
CAN.G1021.25 Capsicum annuum HOM05D004844 ORTHO05D006036 9.9e-10 70.1 81 46.9
Rhsim10G0117900 Rhododendron simsii HOM05D004844 ORTHO05D006036 8.4e-09 67.0 82 56.1
Actinidia31976 Actinidia chinensis HOM05D004844 ORTHO05D006036 5.4e-08 64.3 51 66.7
RcHm_v2.0_Chr1g0340811 Rosa chinensis HOM05D004844 ORTHO05D006036 2.7e-07 62.0 58 51.7
Actinidia27764 Actinidia chinensis HOM05D004844 ORTHO05D006036 3.9e-06 58.2 58 56.9
TAR629G1217 Trochodendron aralioides HOM05D004844 ORTHO05D006036 6.7e-06 57.4 123 42.3


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