Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G60985 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 4.2e-52 207.6 96 100.0
AT1G60986 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 2.9e-32 141.7 98 69.4
AL2G15500 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 4.9e-32 141.0 98 68.4
Carub.0002s0426 Capsella rubella HOM05D009053 ORTHO05D010698 1.2e-30 136.3 96 66.7
AT1G60987 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 1.4e-26 122.9 98 59.2
AL2G15490 Arabidopsis lyrata HOM05D009053 ORTHO05D010698 2.3e-26 122.1 98 60.2
CARHR052060 Cardamine hirsuta HOM05D009053 ORTHO05D010698 2.7e-22 108.6 94 56.4
Thhalv10023986m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 2.7e-22 108.6 97 54.6
Thhalv10023883m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 3.5e-22 108.2 98 56.1
Sp2g03540 Schrenkiella parvula HOM05D009053 ORTHO05D010698 3.0e-21 105.1 97 54.6
Aa31LG2G9610 Aethionema arabicum HOM05D009053 ORTHO05D010698 1.1e-20 103.2 94 53.2
C01p37590 Brassica napus HOM05D009053 ORTHO05D010698 1.9e-20 102.4 95 52.6
BolC1t03725H Brassica oleracea HOM05D009053 ORTHO05D010698 1.9e-20 102.4 95 52.6
BcaB04g20305 Brassica carinata HOM05D009053 ORTHO05D010698 4.3e-20 101.3 95 51.6
BcaC09g49348 Brassica carinata HOM05D009053 ORTHO05D010698 4.3e-20 101.3 95 52.6
A01p29760 Brassica napus HOM05D009053 ORTHO05D010698 4.3e-20 101.3 95 51.6
BraA01t03103Z Brassica rapa HOM05D009053 ORTHO05D010698 4.3e-20 101.3 95 51.6
A01p30500 Brassica napus HOM05D009053 ORTHO05D010698 5.6e-20 100.9 95 51.6
BraA01t03182Z Brassica rapa HOM05D009053 ORTHO05D010698 5.6e-20 100.9 95 51.6
Thhalv10024049m.g Eutrema salsugineum HOM05D009053 ORTHO05D010698 9.5e-20 100.1 132 43.2
BcaB04g20300 Brassica carinata HOM05D009053 ORTHO05D010698 2.8e-19 98.6 95 50.5
Carub.0002s0423 Capsella rubella HOM05D009053 ORTHO05D010698 3.4e-17 91.7 94 50.0
AT1G60989 Arabidopsis thaliana HOM05D009053 ORTHO05D010698 4.4e-17 91.3 94 50.0
CARHR052040 Cardamine hirsuta HOM05D009053 ORTHO05D014846 1.5e-12 76.3 95 44.2
AL2G15510 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 7.3e-12 73.9 95 43.2
AL2G15522 Arabidopsis lyrata HOM05D009053 ORTHO05D014846 7.3e-12 73.9 95 43.2
AT1G60983 Arabidopsis thaliana HOM05D009053 ORTHO05D014846 3.6e-11 71.6 95 42.1
Carub.0002s0427 Capsella rubella HOM05D009053 ORTHO05D014846 1.8e-10 69.3 95 38.9
Thhalv10023863m.g Eutrema salsugineum HOM05D009053 ORTHO05D014846 8.9e-10 67.0 95 40.0
Sp2g03580 Schrenkiella parvula HOM05D009053 ORTHO05D014846 3.8e-08 61.6 98 38.8
Aa31LG10G6400 Aethionema arabicum HOM05D010807 ORTHO05D010698 6.4e-08 60.8 89 41.6
BcaC02g10447 Brassica carinata HOM05D009053 ORTHO05D014846 1.1e-07 60.1 95 37.9
C04p28810 Brassica napus HOM05D009053 ORTHO05D014846 1.1e-07 60.1 95 37.9
BolC4t24415H Brassica oleracea HOM05D009053 ORTHO05D014846 1.1e-07 60.1 95 37.9
AL7G39650 Arabidopsis lyrata HOM05D010807 ORTHO05D010698 4.2e-07 58.2 101 36.6
CARHR290170 Cardamine hirsuta HOM05D010807 ORTHO05D010698 4.2e-07 58.2 88 36.4
Thhalv10024151m.g Eutrema salsugineum HOM05D009053 ORTHO05D014846 4.2e-07 58.2 98 38.8
A03p68010 Brassica napus HOM05D009053 ORTHO05D014846 7.1e-07 57.4 91 37.4
BraA01t02672Z Brassica rapa HOM05D009053 ORTHO05D014846 7.1e-07 57.4 91 37.4
THA.LOC104820250 Tarenaya hassleriana HOM05D010807 ORTHO05D010698 1.2e-06 56.6 92 38.0
AT4G15735 Arabidopsis thaliana HOM05D010807 ORTHO05D010698 4.6e-06 54.7 101 34.7


User provided reference genes

Program Settings