Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 2.5e-184 648.7 340 100.0
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 7.2e-179 630.6 340 97.1
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 3.1e-174 615.1 340 94.4
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 9.1e-174 613.6 340 94.4
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 6.1e-170 600.9 340 92.4
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 5.2e-169 597.8 341 92.7
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 5.7e-168 594.3 341 91.5
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 5.7e-168 594.3 341 91.5
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 3.7e-167 591.7 341 91.2
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 3.4e-160 568.5 341 87.7
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 5.7e-160 567.8 322 91.6
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 2.7e-154 548.9 340 82.9
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 4.9e-143 511.5 329 79.0
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 7.0e-142 507.7 341 81.5
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 1.7e-140 503.1 336 77.4
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 4.7e-138 495.0 336 76.5
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 7.5e-136 487.6 336 75.3
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 9.8e-136 487.3 336 75.6
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 9.8e-136 487.3 336 76.2
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 9.8e-136 487.3 331 72.8
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 1.3e-135 486.9 330 76.1
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 1.7e-135 486.5 336 75.0
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 1.4e-134 483.4 331 76.1
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 1.9e-134 483.0 336 72.3
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 3.2e-134 482.3 335 73.1
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 5.4e-134 481.5 336 74.1
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 7.0e-134 481.1 336 75.0
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 1.6e-133 479.9 326 75.5
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 2.0e-133 479.6 332 74.4
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 6.0e-133 478.0 336 75.0
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 7.8e-133 477.6 331 74.0
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 1.0e-132 477.2 312 77.2
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 2.3e-132 476.1 336 72.9
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 3.0e-132 475.7 323 76.8
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 5.0e-132 474.9 331 74.3
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 5.0e-132 474.9 326 73.3
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 5.0e-132 474.9 333 73.9
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 6.6e-132 474.6 336 72.6
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 6.6e-132 474.6 322 75.8
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 1.9e-131 473.0 337 72.1
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 2.5e-131 472.6 333 74.8
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 3.3e-131 472.2 331 71.9
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 7.3e-131 471.1 338 71.6
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 7.3e-131 471.1 336 72.6
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 1.2e-130 470.3 336 72.6
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 2.8e-130 469.2 326 72.1
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 2.8e-130 469.2 323 75.2
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 3.6e-130 468.8 336 72.3
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 1.8e-129 466.5 333 71.8
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 5.2e-129 464.9 333 73.6
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 5.2e-129 464.9 321 73.5
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 5.2e-129 464.9 373 68.4
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 5.2e-129 464.9 333 71.2
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 6.8e-129 464.5 336 71.7
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 7.5e-128 461.1 334 71.6
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 7.5e-128 461.1 330 73.3
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 1.7e-127 459.9 330 70.3
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 1.7e-127 459.9 333 72.4
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 2.9e-127 459.1 333 71.5
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 2.9e-127 459.1 334 71.6
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 3.7e-127 458.8 330 70.3
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 3.7e-127 458.8 334 72.5
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 3.7e-127 458.8 353 69.4
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 6.4e-127 458.0 325 73.8
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 1.1e-126 457.2 334 71.3
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 1.1e-126 457.2 334 70.7
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 1.4e-126 456.8 336 71.7
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 4.1e-126 455.3 323 70.9
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 2.1e-125 453.0 321 71.7
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 7.8e-125 451.1 344 67.4
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 1.1e-123 447.2 336 67.3
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 4.7e-122 441.8 336 69.9
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 1.8e-121 439.9 326 70.2
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 5.2e-121 438.3 331 68.0
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 3.4e-120 435.6 340 65.6
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 6.0e-117 424.9 394 60.9
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 5.1e-116 421.8 355 64.5
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 7.3e-115 417.9 331 66.2
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 1.8e-113 413.3 321 66.4
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 2.4e-113 412.9 298 72.1
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 6.8e-113 411.4 336 67.3
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 2.6e-112 409.5 331 65.0
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 8.4e-111 404.4 282 73.4
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 2.9e-103 379.4 336 62.2
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 1.4e-102 377.1 331 61.0
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 4.6e-101 372.1 345 58.8
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 6.0e-101 371.7 340 59.7
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 7.6e-96 354.8 249 72.7
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 1.4e-94 350.5 333 55.3
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 3.2e-94 349.4 331 54.1
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 1.0e-87 327.8 321 53.3
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 1.4e-86 323.9 242 67.4
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 9.6e-83 311.2 197 77.7
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 2.4e-81 306.6 206 75.7
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 5.3e-81 305.4 326 49.7
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 6.7e-76 288.5 326 46.9
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 6.9e-73 278.5 201 72.6
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 6.5e-71 271.9 181 75.1
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 1.8e-68 263.8 315 46.7
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 2.8e-66 256.5 370 45.7
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 1.4e-65 254.2 359 41.5
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 2.4e-65 253.4 241 59.3
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.0e-63 248.1 326 42.6
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 2.4e-57 226.9 175 65.7
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 5.0e-47 192.6 174 50.0
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 5.0e-47 192.6 149 67.8
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 7.2e-38 162.2 283 39.9
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 9.4e-38 161.8 305 39.0
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 8.0e-37 158.7 330 31.8
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 5.7e-35 152.5 126 66.7
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 4.1e-33 146.4 124 62.9
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 2.1e-29 134.0 86 76.7
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 1.0e-23 115.2 332 29.8
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 1.0e-20 105.1 74 63.5
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 3.1e-12 77.0 78 60.3
Ca_23751_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 9.8e-11 72.0 134 41.0
Ca_27492_v3 Cicer arietinum L. HOM05D005416 ORTHO05D007956 9.8e-11 72.0 134 41.0


User provided reference genes

Program Settings