Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 3.3e-303 1044.3 539 100.0
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 8.8e-264 913.3 499 94.0
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 7.2e-250 867.1 498 88.4
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 6.8e-248 860.5 498 87.3
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 2.9e-243 845.1 533 81.8
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 2.7e-228 795.4 503 79.9
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 1.6e-225 786.2 499 80.8
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 2.9e-222 775.4 498 79.9
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 2.9e-222 775.4 498 79.9
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 3.7e-222 775.0 498 79.9
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 3.9e-211 738.4 504 74.0
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 5.1e-203 711.4 500 75.0
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 4.0e-184 648.7 365 91.2
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 6.9e-160 568.2 511 60.1
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 4.7e-156 555.4 496 58.7
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 2.8e-153 546.2 496 57.3
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 7.7e-151 538.1 494 57.9
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 1.7e-150 537.0 513 56.7
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 4.2e-149 532.3 514 58.0
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 5.5e-149 531.9 505 58.2
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 5.5e-149 531.9 501 60.1
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 1.4e-147 527.3 508 57.5
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 1.4e-147 527.3 508 59.3
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 1.8e-147 526.9 488 57.0
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 3.9e-147 525.8 522 58.0
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 8.8e-147 524.6 519 56.3
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 8.2e-145 518.1 538 54.5
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 3.8e-142 509.2 518 54.1
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 2.1e-140 503.4 501 55.7
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 3.6e-140 502.7 525 54.3
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 3.6e-140 502.7 501 55.5
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 6.1e-140 501.9 511 55.4
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 4.0e-139 499.2 514 54.5
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 4.0e-139 499.2 458 58.7
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 5.7e-138 495.4 506 55.7
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 9.7e-138 494.6 501 54.5
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.7e-137 493.8 528 53.0
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.7e-137 493.8 519 54.1
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 3.7e-137 492.7 548 53.5
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 8.3e-137 491.5 513 55.4
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 4.1e-136 489.2 507 53.5
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 7.7e-135 485.0 501 53.3
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 5.0e-134 482.3 501 53.1
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.1e-132 476.9 527 52.6
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 8.0e-132 474.9 513 52.6
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 1.0e-131 474.6 489 55.2
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 2.6e-130 469.9 508 54.3
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 1.7e-129 467.2 483 55.9
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 3.1e-128 463.0 511 51.5
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 2.0e-127 460.3 514 51.2
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 4.5e-127 459.1 513 52.0
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 5.9e-127 458.8 508 51.0
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 5.9e-127 458.8 510 52.2
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 5.9e-127 458.8 518 51.7
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 7.7e-127 458.4 511 52.3
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 3.3e-125 453.0 508 50.0
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 7.2e-125 451.8 500 51.0
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 1.6e-124 450.7 514 50.2
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 3.6e-124 449.5 523 49.7
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 4.7e-124 449.1 514 49.8
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 8.0e-124 448.4 503 52.3
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 8.0e-124 448.4 496 50.6
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 8.0e-124 448.4 496 50.6
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 5.2e-123 445.7 496 49.8
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 1.2e-122 444.5 543 49.4
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 2.6e-122 443.4 511 49.1
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 7.5e-122 441.8 502 49.8
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.3e-113 414.5 511 48.9
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 1.1e-112 411.4 467 48.2
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 2.3e-107 393.7 559 43.3
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 1.1e-104 384.8 417 52.3
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 7.8e-103 378.6 511 46.2
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 9.5e-101 371.7 517 42.4
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 2.6e-98 363.6 367 54.5
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 3.5e-87 326.6 504 40.1
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 4.6e-87 326.2 505 40.2
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 1.1e-85 321.6 299 61.9
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 1.5e-85 321.2 366 52.5
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 1.6e-84 317.8 507 41.8
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 2.8e-84 317.0 340 56.5
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 2.2e-81 307.4 502 39.4
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 5.4e-80 302.8 342 51.5
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 7.4e-69 265.8 340 51.2
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 1.3e-65 255.0 591 31.1
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 1.3e-60 238.4 136 83.8
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 7.7e-42 176.0 187 55.1
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 6.1e-31 139.8 132 56.1
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 3.3e-29 134.0 123 61.0
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 1.0e-22 112.5 123 54.5
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 5.9e-18 96.7 120 43.3
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 5.6e-08 63.5 166 30.1


User provided reference genes

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