Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G03600 Arabidopsis thaliana HOM05D006115 ORTHO05D007528 6.7e-88 327.4 175 100.0
AL1G13100 Arabidopsis lyrata HOM05D006115 ORTHO05D007528 1.3e-83 313.2 175 96.6
CARHR002940 Cardamine hirsuta HOM05D006115 ORTHO05D007528 1.8e-80 302.8 175 92.0
BcaC05g24519 Brassica carinata HOM05D006115 ORTHO05D007528 8.5e-75 283.9 177 88.1
C05p02030 Brassica napus HOM05D006115 ORTHO05D007528 8.5e-75 283.9 177 88.1
BolC5t28981H Brassica oleracea HOM05D006115 ORTHO05D007528 1.2e-73 280.0 177 86.4
Carub.0001s0272 Capsella rubella HOM05D006115 ORTHO05D007528 2.1e-73 279.3 175 88.0
A10p02120 Brassica napus HOM05D006115 ORTHO05D007528 1.4e-72 276.6 176 85.8
Sp1g02510 Schrenkiella parvula HOM05D006115 ORTHO05D007528 4.8e-70 268.1 175 84.0
BcaB02g06915 Brassica carinata HOM05D006115 ORTHO05D007528 6.3e-70 267.7 178 84.3
BolC8t46868H Brassica oleracea HOM05D006115 ORTHO05D007528 1.4e-69 266.5 177 83.1
Thhalv10008901m.g Eutrema salsugineum HOM05D006115 ORTHO05D007528 1.4e-69 266.5 176 84.1
A08p37300 Brassica napus HOM05D006115 ORTHO05D007528 5.3e-69 264.6 178 84.3
BcaC07g36953 Brassica carinata HOM05D006115 ORTHO05D007528 9.1e-69 263.8 179 83.2
C08p00700 Brassica napus HOM05D006115 ORTHO05D007528 9.1e-69 263.8 179 83.2
BraA08t35627Z Brassica rapa HOM05D006115 ORTHO05D007528 1.2e-68 263.5 179 82.1
BraA10t42481Z Brassica rapa HOM05D006115 ORTHO05D007528 2.3e-64 249.2 177 80.2
Aa31LG1G20930 Aethionema arabicum HOM05D006115 ORTHO05D007528 2.9e-59 232.3 175 76.0
Gohir.A01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 6.5e-51 204.5 172 66.3
Potri.005G206200 Populus trichocarpa HOM05D006115 ORTHO05D007528 6.5e-51 204.5 178 66.3
Duzib132G1267 Durio zibethinus HOM05D006115 ORTHO05D007528 4.2e-50 201.8 167 70.1
COL.COLO4_35403 Corchorus olitorius HOM05D006115 ORTHO05D007528 1.2e-49 200.3 166 68.1
Sabra05G0156800 Salix brachista HOM05D006115 ORTHO05D007528 1.6e-49 199.9 178 64.6
ClCG02G001140 Citrullus lanatus HOM05D006115 ORTHO05D007528 5.2e-48 194.9 135 75.6
Rhsim06G0148500 Rhododendron simsii HOM05D006115 ORTHO05D007528 1.2e-47 193.7 166 68.1
THA.LOC104827374 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.2e-47 193.7 137 75.9
Gohir.D01G015900 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.0e-47 193.0 174 63.2
Potri.002G056300 Populus trichocarpa HOM05D006115 ORTHO05D007528 2.0e-47 193.0 174 65.5
Gorai.002G017600 Gossypium raimondii HOM05D006115 ORTHO05D007528 2.6e-47 192.6 174 63.2
Sabra02G0045600 Salix brachista HOM05D006115 ORTHO05D007528 2.6e-47 192.6 171 66.1
Sed0024793 Sechium edule HOM05D006115 ORTHO05D007528 5.7e-47 191.4 174 63.2
Sed0009578 Sechium edule HOM05D006115 ORTHO05D007528 1.3e-46 190.3 176 63.6
Ciclev10016927m.g Citrus clementina HOM05D006115 ORTHO05D007528 1.7e-46 189.9 175 61.1
Lalb_Chr24g0399841 Lupinus albus HOM05D006115 ORTHO05D007528 2.8e-46 189.1 178 60.1
Lj1P733T48 Lonicera japonica HOM05D006115 ORTHO05D007528 4.9e-46 188.3 132 75.0
MELO3C018748.2 Cucumis melo HOM05D006115 ORTHO05D007528 8.3e-46 187.6 175 61.1
Peaxi162Scf00610g00313 Petunia axillaris HOM05D006115 ORTHO05D007528 8.3e-46 187.6 179 64.8
Eucgr.K00947 Eucalyptus grandis HOM05D006115 ORTHO05D007528 1.1e-45 187.2 168 63.7
MD09G1090500 Malus domestica HOM05D006115 ORTHO05D007528 1.1e-45 187.2 175 60.0
MD17G1079700 Malus domestica HOM05D006115 ORTHO05D007528 1.1e-45 187.2 175 61.1
PGR142G3842 Punica granatum HOM05D006115 ORTHO05D007528 1.1e-45 187.2 178 60.7
Atru.chr6.3034 Acer truncatum HOM05D006115 ORTHO05D007528 1.8e-45 186.4 184 60.9
Prupe.3G235100 Prunus persica HOM05D006115 ORTHO05D007528 1.8e-45 186.4 177 62.1
Cfa014568 Carpinus fangiana HOM05D006115 ORTHO05D007528 2.4e-45 186.0 179 61.5
Peaxi162Scf00132g00062 Petunia axillaris HOM05D006115 ORTHO05D007528 2.4e-45 186.0 176 63.6
HPP92_017628 Vanilla planifolia HOM05D006115 ORTHO05D007528 3.1e-45 185.7 131 72.5
Nitab4.5_0001090g0130 Nicotiana tabacum HOM05D006115 ORTHO05D007528 5.4e-45 184.9 172 64.0
Psat7g036720 Pisum sativum HOM05D006115 ORTHO05D007528 5.4e-45 184.9 177 61.6
PGSC0003DMG400018360 Solanum tuberosum HOM05D006115 ORTHO05D007528 5.4e-45 184.9 169 65.1
MBI02_g19258_MAGBIO Magnolia biondii HOM05D006115 ORTHO05D007528 7.0e-45 184.5 112 83.0
TWI75G0783 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 7.0e-45 184.5 158 65.2
CSS0015532 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 9.1e-45 184.1 136 72.1
CSS0031699 Camellia sinensis var. sinensis HOM05D006115 ORTHO05D007528 9.1e-45 184.1 136 72.1
CsaV3_7G004300 Cucumis sativus L. HOM05D006115 ORTHO05D007528 9.1e-45 184.1 175 60.0
Hma1.2p1_0875F.1_g231400 Hydrangea macrophylla HOM05D006115 ORTHO05D007528 9.1e-45 184.1 184 59.2
Lj3g0001000 Lotus japonicus HOM05D006115 ORTHO05D007528 9.1e-45 184.1 178 59.6
Solyc07g054290.1 Solanum lycopersicum HOM05D006115 ORTHO05D007528 1.2e-44 183.7 184 61.4
Sopen07g028230 Solanum pennellii HOM05D006115 ORTHO05D007528 1.2e-44 183.7 172 63.4
Manes.08G098700 Manihot esculenta HOM05D006115 ORTHO05D007528 1.6e-44 183.3 177 61.6
Migut.H01055 Erythranthe guttata HOM05D006115 ORTHO05D007528 2.7e-44 182.6 135 71.9
Gohir.A12G137300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 2.7e-44 182.6 176 61.4
Lalb_Chr14g0366761 Lupinus albus HOM05D006115 ORTHO05D007528 2.7e-44 182.6 179 60.3
QL08p037826 Quercus lobata HOM05D006115 ORTHO05D007528 2.7e-44 182.6 134 70.9
Medtr2g090200 Medicago truncatula HOM05D006115 ORTHO05D007528 4.5e-44 181.8 178 61.8
CANSAT64G2665 Cannabis sativa HOM05D006115 ORTHO05D007528 5.9e-44 181.4 135 71.1
Gohir.D12G141300 Gossypium hirsutum HOM05D006115 ORTHO05D007528 5.9e-44 181.4 108 82.4
Gorai.008G152600 Gossypium raimondii HOM05D006115 ORTHO05D007528 5.9e-44 181.4 108 82.4
CiPaw.04G123900 Carya illinoinensis HOM05D006115 ORTHO05D007528 1.0e-43 180.6 173 61.3
Lj8P115T48 Lonicera japonica HOM05D006115 ORTHO05D007528 1.3e-43 180.3 115 78.3
Nitab4.5_0005380g0050 Nicotiana tabacum HOM05D006115 ORTHO05D007528 1.3e-43 180.3 183 60.1
Phvul.005G105900 Phaseolus vulgaris HOM05D006115 ORTHO05D007528 1.3e-43 180.3 177 59.3
VMungo1080G1219 Vigna mungo HOM05D006115 ORTHO05D007528 1.3e-43 180.3 134 71.6
unitig_26.g9943 Utricularia gibba HOM05D006115 ORTHO05D007528 1.7e-43 179.9 137 70.1
Actinidia09875 Actinidia chinensis HOM05D006115 ORTHO05D007528 2.9e-43 179.1 132 71.2
Cc05_g06750 Coffea canephora HOM05D006115 ORTHO05D007528 2.9e-43 179.1 173 59.5
DCAR_019192 Daucus carota HOM05D006115 ORTHO05D007528 2.9e-43 179.1 169 60.4
TWI18G1016 Tripterygium wilfordii HOM05D006115 ORTHO05D007528 2.9e-43 179.1 136 69.1
Glyma.12G202500 Glycine max HOM05D006115 ORTHO05D007528 3.8e-43 178.7 138 68.1
MSTRG.14200 Avicennia marina HOM05D006115 ORTHO05D007528 5.0e-43 178.3 173 59.0
Haze_13113 Corylus avellana HOM05D006115 ORTHO05D007528 5.0e-43 178.3 178 59.6
MSTRG.12305 Avicennia marina HOM05D006115 ORTHO05D007528 6.6e-43 177.9 168 60.1
Duzib248G0317 Durio zibethinus HOM05D006115 ORTHO05D007528 8.6e-43 177.6 111 80.2
GSVIVG01030552001 Vitis vinifera HOM05D006115 ORTHO05D007528 1.1e-42 177.2 179 57.5
SGA_v2.0_scaffold356G49787 Striga asiatica HOM05D006115 ORTHO05D007528 1.5e-42 176.8 172 58.7
THA.LOC104801178 Tarenaya hassleriana HOM05D006115 ORTHO05D007528 1.5e-42 176.8 115 80.0
Aqoxy4G01223 Aquilegia oxysepala HOM05D006115 ORTHO05D007528 2.5e-42 176.0 140 67.9
Glyma.13G299200 Glycine max HOM05D006115 ORTHO05D007528 2.5e-42 176.0 112 78.6
HanXRQChr17g0542591 Helianthus annuus HOM05D006115 ORTHO05D007528 3.3e-42 175.6 172 59.3
Thecc.02G175700 Theobroma cacao HOM05D006115 ORTHO05D007528 3.3e-42 175.6 173 61.3
FAN02G4183 Fragaria x ananassa HOM05D006115 ORTHO05D007528 4.2e-42 175.3 165 61.2
RcHm_v2.0_Chr2g0162381 Rosa chinensis HOM05D006115 ORTHO05D007528 4.2e-42 175.3 180 60.6
Ah.08g220260 Amaranthus hybridus HOM05D006115 ORTHO05D007528 5.6e-42 174.9 156 62.2
FAN09G2594 Fragaria x ananassa HOM05D006115 ORTHO05D007528 5.6e-42 174.9 176 60.2
Nn1g03988 Nelumbo nucifera HOM05D006115 ORTHO05D007528 5.6e-42 174.9 180 58.3
FvH4_6g45050 Fragaria vesca HOM05D006115 ORTHO05D007528 7.2e-42 174.5 175 59.4
FAN14G2522 Fragaria x ananassa HOM05D006115 ORTHO05D007528 7.2e-42 174.5 175 59.4
TPR.G35547 Trifolium pratense HOM05D006115 ORTHO05D007528 7.2e-42 174.5 176 58.0
FAN05G1351 Fragaria x ananassa HOM05D006115 ORTHO05D007528 9.5e-42 174.1 132 70.5
CDE05G3372 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 1.6e-41 173.3 135 69.6
Oeu040003.1 Olea europaea HOM05D006115 ORTHO05D007528 3.6e-41 172.2 170 56.5
AUR62041946 Chenopodium quinoa HOM05D006115 ORTHO05D007528 4.7e-41 171.8 167 59.9
PSO832G3416 Papaver somniferum HOM05D006115 ORTHO05D007528 8.0e-41 171.0 179 55.3
PSO210G0967 Papaver somniferum HOM05D006115 ORTHO05D007528 1.0e-40 170.6 179 55.3
AUR62028441 Chenopodium quinoa HOM05D006115 ORTHO05D007528 1.8e-40 169.9 182 56.6
Lsat_1_v5_gn_3_39480 Lactuca sativa HOM05D006115 ORTHO05D007528 3.0e-40 169.1 172 58.7
Zm00001eb395230 Zea mays HOM05D006115 ORTHO05D007528 3.0e-40 169.1 135 68.1
Os03g0333400 Oryza sativa ssp. japonica HOM05D006115 ORTHO05D007528 4.0e-40 168.7 146 62.3
unitig_749.g13954 Utricularia gibba HOM05D006115 ORTHO05D007528 4.0e-40 168.7 172 57.6
Oeu029929.1 Olea europaea HOM05D006115 ORTHO05D007528 5.2e-40 168.3 135 65.9
Zm00001eb015950 Zea mays HOM05D006115 ORTHO05D007528 5.2e-40 168.3 161 60.9
Sc12g0002830 Simmondsia chinensis HOM05D006115 ORTHO05D007528 1.2e-39 167.2 103 80.6
ECA246G1074 Erigeron canadensis HOM05D006115 ORTHO05D007528 3.4e-39 165.6 107 76.6
Dinv03833 Davidia involucrata HOM05D006115 ORTHO05D007528 1.7e-38 163.3 166 56.0
Duzib052G1052 Durio zibethinus HOM05D006115 ORTHO05D007528 3.2e-37 159.1 163 59.5
SEGI_04908 Sequoiadendron giganteum HOM05D006115 ORTHO05D007528 1.9e-34 149.8 108 68.5
Ca_01513_v3 Cicer arietinum L. HOM05D006115 ORTHO05D007528 1.8e-32 143.3 85 82.4
SMO364G0930 Selaginella moellendorffii HOM05D006115 ORTHO05D007528 3.1e-32 142.5 129 56.6
Pp3c9_26020 Physcomitrium patens HOM05D006115 ORTHO05D007528 1.7e-30 136.7 105 64.8
Mapoly0049s0056 Marchantia polymorpha HOM05D006115 ORTHO05D007528 1.4e-29 133.7 123 56.1
AagrBONN_evm.TU.Sc2ySwM_228.954 Anthoceros agrestis HOM05D006115 ORTHO05D007528 7.0e-29 131.3 129 53.5
Actinidia11067 Actinidia chinensis HOM05D006115 ORTHO05D007528 4.6e-28 128.6 139 56.8
CBR_g50764 Chara braunii HOM05D006115 ORTHO05D007528 3.3e-26 122.5 181 45.9
CDE05G0569 Ceratophyllum demersum HOM05D006115 ORTHO05D007528 2.3e-24 116.3 124 50.8
MCO14G469 Micromonas commoda HOM05D006115 ORTHO05D007528 1.9e-21 106.7 140 41.4
Cre05.g243800 Chlamydomonas reinhardtii HOM05D006115 ORTHO05D007528 2.7e-20 102.8 176 39.2
ATR0693G305 Amborella trichopoda HOM05D006115 ORTHO05D007528 2.8e-17 92.8 146 46.6
TAR627G0228 Trochodendron aralioides HOM05D006115 ORTHO05D007528 2.8e-17 92.8 88 58.0
Dinv23684 Davidia involucrata HOM05D006115 ORTHO05D007528 3.4e-15 85.9 95 53.7


User provided reference genes

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