Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G38430 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 1.1e-53 213.0 100 100.0
AL8G38470 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 1.1e-53 213.0 100 100.0
Carub.0008s2240 Capsella rubella HOM05D009469 ORTHO05D011620 3.1e-37 158.3 102 74.5
A01p27840 Brassica napus HOM05D009469 ORTHO05D011620 5.6e-23 110.9 102 50.0
BraA01t02921Z Brassica rapa HOM05D009469 ORTHO05D011620 5.6e-23 110.9 102 50.0
BraA01t02924Z Brassica rapa HOM05D009469 ORTHO05D011620 5.6e-23 110.9 102 50.0
BraA01t02925Z Brassica rapa HOM05D009469 ORTHO05D011620 5.6e-23 110.9 102 50.0
C01p35370 Brassica napus HOM05D009469 ORTHO05D011620 7.6e-20 100.5 102 47.1
BolC1t03493H Brassica oleracea HOM05D009469 ORTHO05D011620 7.6e-20 100.5 102 47.1
AL2G22570 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 1.9e-10 69.3 95 33.7
Carub.0008s1729 Capsella rubella HOM05D009469 ORTHO05D011620 4.2e-10 68.2 63 42.9
THA.LOC109117075 Tarenaya hassleriana HOM05D002657 ORTHO05D012605 5.5e-10 67.8 60 41.7
AL3G13300 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 1.2e-09 66.6 56 48.2
THA.LOC104824563 Tarenaya hassleriana HOM05D002657 ORTHO05D003059 3.5e-09 65.1 86 34.9
Duzib150G0010 Durio zibethinus HOM05D010340 ORTHO05D012605 4.6e-09 64.7 84 41.7
AL6G25800 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 1.0e-08 63.5 95 34.7
Carub.0004s0132 Capsella rubella HOM05D010340 ORTHO05D012605 1.3e-08 63.2 65 38.5
A06p26430 Brassica napus HOM05D009469 ORTHO05D011620 1.8e-08 62.8 63 36.5
BNapus_Darmor_BZH_scaffold_78p00180 Brassica napus HOM05D009469 ORTHO05D011620 1.8e-08 62.8 63 36.5
Sp6g29040 Schrenkiella parvula HOM05D009469 ORTHO05D011620 1.8e-08 62.8 61 42.6
BcaC09g47751 Brassica carinata HOM05D009469 ORTHO05D011620 2.3e-08 62.4 63 36.5
BNapus_Darmor_BZH_scaffold_162p00200 Brassica napus HOM05D009469 ORTHO05D011620 2.3e-08 62.4 63 36.5
BolC1t05826H Brassica oleracea HOM05D009469 ORTHO05D011620 2.3e-08 62.4 63 36.5
AT2G22155 Arabidopsis thaliana HOM05D010340 ORTHO05D012605 3.0e-08 62.0 61 39.3
BraA01t04575Z Brassica rapa HOM05D009469 ORTHO05D011620 3.9e-08 61.6 61 36.1
AT5G15000 Arabidopsis thaliana HOM05D009469 ORTHO05D011620 1.1e-07 60.1 94 29.8
A04p18180 Brassica napus HOM05D010340 ORTHO05D012605 1.1e-07 60.1 89 33.7
AT5G14995 Arabidopsis thaliana HOM05D009469 ORTHO05D011620 1.5e-07 59.7 95 32.6
AL449U10010 Arabidopsis lyrata HOM05D010340 ORTHO05D012605 1.9e-07 59.3 61 37.7
AL4G11610 Arabidopsis lyrata HOM05D010340 ORTHO05D012605 1.9e-07 59.3 61 37.7
Gorai.001G138900 Gossypium raimondii HOM05D001603 ORTHO05D001393 1.9e-07 59.3 88 36.4
Gohir.D07G128600 Gossypium hirsutum HOM05D001603 ORTHO05D001393 3.3e-07 58.5 88 36.4
AL4G11500 Arabidopsis lyrata HOM05D010340 ORTHO05D012605 5.7e-07 57.8 61 36.1
AL6G25820 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 5.7e-07 57.8 93 33.3
C04p53210 Brassica napus HOM05D010340 ORTHO05D012605 5.7e-07 57.8 89 32.6
C04p53300 Brassica napus HOM05D010340 ORTHO05D012605 5.7e-07 57.8 89 32.6
BolC4t26885H Brassica oleracea HOM05D010340 ORTHO05D012605 5.7e-07 57.8 89 32.6
Gohir.A07G124401 Gossypium hirsutum HOM05D010340 ORTHO05D012605 7.4e-07 57.4 85 37.6
Gohir.D07G128701 Gossypium hirsutum HOM05D010340 ORTHO05D001393 7.4e-07 57.4 85 37.6
Gorai.001G139000 Gossypium raimondii HOM05D010340 ORTHO05D001393 7.4e-07 57.4 85 37.6
A04p18200 Brassica napus HOM05D010340 ORTHO05D012605 1.6e-06 56.2 89 32.6
Thhalv10015392m.g Eutrema salsugineum HOM05D009469 ORTHO05D011620 1.6e-06 56.2 60 38.3
A04p18190 Brassica napus HOM05D010340 ORTHO05D012605 2.1e-06 55.8 92 32.6
A07p07500 Brassica napus HOM05D010340 ORTHO05D012605 2.8e-06 55.5 89 32.6
BraA07t28541Z Brassica rapa HOM05D010340 ORTHO05D012605 2.8e-06 55.5 89 32.6
C04p53370 Brassica napus HOM05D010340 ORTHO05D012605 3.7e-06 55.1 89 31.5
BolC4t26891H Brassica oleracea HOM05D010340 ORTHO05D012605 3.7e-06 55.1 89 31.5


User provided reference genes

Program Settings