Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G37960 Arabidopsis lyrata HOM05D011375 ORTHO05D013410 0.0e+00 1115.1 570 100.0
AT5G61300 Arabidopsis thaliana HOM05D011375 ORTHO05D013410 1.3e-217 760.0 581 74.2
Carub.0008s2198 Capsella rubella HOM05D011375 ORTHO05D013410 1.7e-204 716.5 608 67.6
Thhalv10003964m.g Eutrema salsugineum HOM05D011375 ORTHO05D013410 9.0e-150 534.6 610 55.9
CARHR275060 Cardamine hirsuta HOM05D011375 ORTHO05D013410 8.5e-132 474.9 598 52.8
AL6G18130 Arabidopsis lyrata HOM05D011375 ORTHO05D013410 8.6e-68 262.3 649 36.7
THA.LOC104801405 Tarenaya hassleriana HOM05D011375 ORTHO05D013410 1.6e-66 258.1 629 36.7
Carub.0006s0671 Capsella rubella HOM05D011375 ORTHO05D013410 5.2e-65 253.1 655 37.4
Aa31LG3G18680 Aethionema arabicum HOM05D011375 ORTHO05D013410 3.4e-64 250.4 627 37.0
AT5G07790 Arabidopsis thaliana HOM05D011375 ORTHO05D013410 4.6e-61 240.0 648 35.2
Sp6g35150 Schrenkiella parvula HOM05D011375 ORTHO05D013410 1.0e-60 238.8 638 35.0
CARHR205390 Cardamine hirsuta HOM05D011375 ORTHO05D013410 1.1e-51 208.8 628 35.4
Thhalv10015619m.g Eutrema salsugineum HOM05D011375 ORTHO05D013410 2.5e-51 207.6 521 37.2
BolC3t12926H Brassica oleracea HOM05D011375 ORTHO05D013410 9.0e-41 172.6 592 34.3
C03p03880 Brassica napus HOM05D011375 ORTHO05D013410 9.9e-40 169.1 592 34.3
A03p03460 Brassica napus HOM05D011375 ORTHO05D013410 1.8e-36 158.3 594 33.0
BraA03t09696Z Brassica rapa HOM05D011375 ORTHO05D013410 4.2e-30 137.1 600 30.7
Rhsim08G0149900 Rhododendron simsii HOM05D001536 ORTHO05D001442 3.3e-19 100.9 666 26.1
Manes.06G088300 Manihot esculenta HOM05D001536 ORTHO05D001442 2.4e-17 94.7 733 23.9
vmacro17582 Vaccinium macrocarpon HOM05D001536 ORTHO05D001442 2.6e-16 91.3 629 24.8
Duzib205G0516 Durio zibethinus HOM05D001536 ORTHO05D001442 2.1e-13 81.6 230 30.9
Manes.14G082800 Manihot esculenta HOM05D001536 ORTHO05D001442 2.7e-13 81.3 231 31.2
Gohir.A03G068500 Gossypium hirsutum HOM05D001536 ORTHO05D001442 3.6e-13 80.9 226 31.4
Thecc.03G095800 Theobroma cacao HOM05D001536 ORTHO05D001442 6.1e-13 80.1 234 32.1
QL10p018539 Quercus lobata HOM05D001536 ORTHO05D001442 7.9e-13 79.7 230 32.2
Duzib068G0802 Durio zibethinus HOM05D001536 ORTHO05D001442 2.5e-11 74.7 158 38.6
Gohir.D03G095100 Gossypium hirsutum HOM05D001536 ORTHO05D001442 5.7e-11 73.6 487 24.6
Cpa.g.c38931 Carica papaya HOM05D001536 ORTHO05D001442 7.4e-11 73.2 169 36.1
Ciclev10018667m.g Citrus clementina HOM05D001536 ORTHO05D001442 7.4e-11 73.2 249 30.9
Gorai.003G099300 Gossypium raimondii HOM05D001536 ORTHO05D001442 7.4e-11 73.2 487 24.6
COL.COLO4_38302 Corchorus olitorius HOM05D001536 ORTHO05D001442 9.7e-11 72.8 236 28.8
Atru.chr9.313 Acer truncatum HOM05D001536 ORTHO05D001442 2.2e-10 71.6 206 30.1
Haze_07670 Corylus avellana HOM05D001536 ORTHO05D001442 4.8e-10 70.5 220 31.4
Nn4g23320 Nelumbo nucifera HOM05D001536 ORTHO05D001442 8.2e-10 69.7 158 32.9
BcaC01g01751 Brassica carinata HOM05D001536 ORTHO05D001442 1.4e-09 68.9 176 32.4
C03p72300 Brassica napus HOM05D001536 ORTHO05D001442 1.4e-09 68.9 176 32.4
BolC3t19525H Brassica oleracea HOM05D001536 ORTHO05D001442 1.4e-09 68.9 176 32.4
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 4.1e-09 67.4 224 28.6
Dinv38763 Davidia involucrata HOM05D001536 ORTHO05D001442 4.1e-09 67.4 152 32.9
GSVIVG01007938001 Vitis vinifera HOM05D001536 ORTHO05D001442 5.3e-09 67.0 533 25.9
arahy.Tifrunner.gnm1.ann1.I4K7T0 Arachis hypogaea HOM05D001536 ORTHO05D001442 6.9e-09 66.6 205 30.7
C07p19470 Brassica napus HOM05D001536 ORTHO05D001442 6.9e-09 66.6 166 31.9
BolC7t42466H Brassica oleracea HOM05D001536 ORTHO05D001442 6.9e-09 66.6 166 31.9
Cfa019289 Carpinus fangiana HOM05D001536 ORTHO05D001442 9.1e-09 66.2 230 30.4
PGSC0003DMG401028385 Solanum tuberosum HOM05D001536 ORTHO05D001442 9.1e-09 66.2 209 30.1
arahy.Tifrunner.gnm1.ann1.SK753M Arachis hypogaea HOM05D001536 ORTHO05D001442 1.2e-08 65.9 168 30.4
Hund09843 Selenicereus undatus HOM05D001536 ORTHO05D001442 1.2e-08 65.9 651 24.7
ClCG04G012020 Citrullus lanatus HOM05D001536 ORTHO05D001442 2.0e-08 65.1 603 26.0
CANSAT50G0006 Cannabis sativa HOM05D001536 ORTHO05D001442 2.6e-08 64.7 242 30.6
Dinv34112 Davidia involucrata HOM05D001536 ORTHO05D001442 3.4e-08 64.3 188 31.9
BcaC06g35135 Brassica carinata HOM05D001536 ORTHO05D001442 4.5e-08 63.9 208 28.8
Oeu047264.1 Olea europaea HOM05D001536 ORTHO05D001442 7.7e-08 63.2 203 29.1
Solyc05g012640.3 Solanum lycopersicum HOM05D001536 ORTHO05D001442 7.7e-08 63.2 207 29.0
Lj4g0023409 Lotus japonicus HOM05D001536 ORTHO05D001442 1.0e-07 62.8 227 29.1
Actinidia09237 Actinidia chinensis HOM05D000001 ORTHO05D000003 1.3e-07 62.4 235 26.8
Ah.11g048120 Amaranthus hybridus HOM05D001536 ORTHO05D001442 1.3e-07 62.4 662 24.8
Duzib268G0567 Durio zibethinus HOM05D001536 ORTHO05D001442 1.3e-07 62.4 195 29.2
Cpa.g.sc13.308 Carica papaya HOM05D001536 ORTHO05D001442 1.7e-07 62.0 678 23.6
FvH4_5g14380 Fragaria vesca HOM05D001536 ORTHO05D001442 2.2e-07 61.6 338 26.3
Sopen05g007470 Solanum pennellii HOM05D001536 ORTHO05D001442 2.9e-07 61.2 193 28.5
Actinidia31950 Actinidia chinensis HOM05D001536 ORTHO05D000003 3.8e-07 60.8 193 28.5
CAN.G1340.15 Capsicum annuum HOM05D001536 ORTHO05D001442 3.8e-07 60.8 197 29.9
Actinidia19923 Actinidia chinensis HOM05D001536 ORTHO05D001442 5.0e-07 60.5 198 28.8
Dinv16703 Davidia involucrata HOM05D001536 ORTHO05D001442 5.0e-07 60.5 156 32.7
Ciclev10030574m.g Citrus clementina HOM05D001536 ORTHO05D001442 8.5e-07 59.7 198 29.8
Ca_25949_v3 Cicer arietinum L. HOM05D001536 ORTHO05D001442 1.1e-06 59.3 170 31.2
Duzib264G1081 Durio zibethinus HOM05D001536 ORTHO05D001442 1.1e-06 59.3 212 32.5
FAN08G1032 Fragaria x ananassa HOM05D001536 ORTHO05D001442 1.1e-06 59.3 192 32.3
Sp1g22180 Schrenkiella parvula HOM05D001536 ORTHO05D001442 1.1e-06 59.3 155 31.0
Aqoxy3G03549 Aquilegia oxysepala HOM05D001536 ORTHO05D001442 1.4e-06 58.9 348 23.3
CSS0003937 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.4e-06 58.9 194 30.9
CSS0012767 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 1.4e-06 58.9 194 30.9
Dinv10677 Davidia involucrata HOM05D001536 ORTHO05D001442 1.4e-06 58.9 218 30.3
Prupe.5G199800 Prunus persica HOM05D001536 ORTHO05D001442 1.4e-06 58.9 195 29.7
Rhsim12G0077000 Rhododendron simsii HOM05D001536 ORTHO05D001442 1.4e-06 58.9 197 28.9
TAR374G1508 Trochodendron aralioides HOM05D001536 ORTHO05D001442 1.4e-06 58.9 225 27.6
Lalb_Chr17g0340961 Lupinus albus HOM05D001536 ORTHO05D001442 1.9e-06 58.5 233 26.6
A07p13020 Brassica napus HOM05D001536 ORTHO05D001442 2.5e-06 58.2 172 27.3
Migut.E00063 Erythranthe guttata HOM05D001536 ORTHO05D001442 2.5e-06 58.2 214 27.6
Peaxi162Scf00097g00712 Petunia axillaris HOM05D001536 ORTHO05D001442 2.5e-06 58.2 193 28.0
Actinidia04855 Actinidia chinensis HOM05D001536 ORTHO05D001442 4.2e-06 57.4 114 36.8
TWI31G0752 Tripterygium wilfordii HOM05D001536 ORTHO05D001442 4.2e-06 57.4 205 27.8
TAR629G1896 Trochodendron aralioides HOM05D001536 ORTHO05D001442 4.2e-06 57.4 255 27.8
Migut.L01226 Erythranthe guttata HOM05D001536 ORTHO05D001442 5.5e-06 57.0 230 27.4
Hma1.2p1_0060F.1_g033420 Hydrangea macrophylla HOM05D001536 ORTHO05D001442 5.5e-06 57.0 184 32.6
MD14G1206400 Malus domestica HOM05D001536 ORTHO05D001442 5.5e-06 57.0 192 29.7
Medtr4g082510 Medicago truncatula HOM05D001536 ORTHO05D001442 7.2e-06 56.6 397 25.7
Peaxi162Scf00364g00128 Petunia axillaris HOM05D001536 ORTHO05D001442 7.2e-06 56.6 209 28.2
CDE07G1318 Ceratophyllum demersum HOM05D001536 ORTHO05D001442 9.4e-06 56.2 99 41.4
MD06G1199000 Malus domestica HOM05D001536 ORTHO05D001442 9.4e-06 56.2 192 30.7


User provided reference genes

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