Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL8G28480 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.9e-80 302.4 146 100.0
Carub.0008s1385 Capsella rubella HOM05D000051 ORTHO05D000015 7.4e-24 114.4 83 63.9
AL8G28340 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.8e-22 109.8 98 61.2
Thhalv10000471m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.4e-19 100.1 105 52.4
Thhalv10013520m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 8.8e-17 90.9 92 55.4
AL6G37800 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.7e-15 85.5 73 56.2
AL8G28500 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.7e-15 85.5 76 57.9
C09p43510 Brassica napus HOM05D000051 ORTHO05D000015 2.4e-14 82.8 78 52.6
BolC9t57236H Brassica oleracea HOM05D000051 ORTHO05D000015 2.4e-14 82.8 78 52.6
AT5G53635 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.3e-14 81.6 126 42.1
Thhalv10015873m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.3e-14 81.6 116 45.7
Thhalv10001850m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.2e-13 80.5 110 41.8
Thhalv10015300m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.2e-13 80.5 90 52.2
AL8G28490 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.5e-13 79.0 76 52.6
AT3G23955 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.0e-12 77.4 81 49.4
AT5G25850 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 1.3e-12 77.0 85 48.2
AL8G28350 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.8e-12 75.5 111 39.6
Thhalv10001812m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 6.5e-12 74.7 63 57.1
Carub.0004s0141 Capsella rubella HOM05D000051 ORTHO05D000015 8.5e-12 74.3 115 42.6
Carub.0008s0328 Capsella rubella HOM05D000051 ORTHO05D000015 8.5e-12 74.3 84 50.0
AL8G28370 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.1e-11 73.9 69 56.5
Carub.0008s1378 Capsella rubella HOM05D000051 ORTHO05D000015 1.5e-11 73.6 77 51.9
Thhalv10002518m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.5e-11 71.6 140 40.7
Carub.0008s1381 Capsella rubella HOM05D000051 ORTHO05D000015 9.4e-11 70.9 86 47.7
Sp5g16420 Schrenkiella parvula HOM05D000051 ORTHO05D000015 9.4e-11 70.9 145 37.2
CARHR284830 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.2e-10 70.5 88 48.9
Carub.0008s1388 Capsella rubella HOM05D000051 ORTHO05D000015 2.7e-10 69.3 67 53.7
CARHR266760 Cardamine hirsuta HOM05D000051 ORTHO05D000015 2.7e-10 69.3 78 48.7
C05p41970 Brassica napus HOM05D000051 ORTHO05D000015 3.6e-10 68.9 94 45.7
BolC5t32931H Brassica oleracea HOM05D000051 ORTHO05D000015 3.6e-10 68.9 94 45.7
BcaB05g22062 Brassica carinata HOM05D000051 ORTHO05D000015 8.0e-10 67.8 57 54.4
C02p18020 Brassica napus HOM05D000051 ORTHO05D032210 2.3e-09 66.2 57 54.4
Thhalv10013489m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.3e-09 66.2 65 52.3
AL8G28360 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 3.0e-09 65.9 70 50.0
C02p20260 Brassica napus HOM05D000051 ORTHO05D000015 4.0e-09 65.5 63 55.6
Carub.0008s1384 Capsella rubella HOM05D000051 ORTHO05D000015 4.0e-09 65.5 78 46.2
Carub.0008s1393 Capsella rubella HOM05D000051 ORTHO05D000015 5.2e-09 65.1 89 37.1
AL8G14500 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.7e-09 64.7 62 48.4
Carub.0005s1103 Capsella rubella HOM05D000051 ORTHO05D000015 6.7e-09 64.7 73 47.9
BcaC03g14400 Brassica carinata HOM05D000051 ORTHO05D000015 8.8e-09 64.3 57 52.6
A02p10940 Brassica napus HOM05D000051 ORTHO05D000015 8.8e-09 64.3 57 52.6
C02p18150 Brassica napus HOM05D000051 ORTHO05D000015 8.8e-09 64.3 57 52.6
BolC2t07945H Brassica oleracea HOM05D000051 ORTHO05D000015 8.8e-09 64.3 57 52.6
BraA02t06159Z Brassica rapa HOM05D000051 ORTHO05D000015 8.8e-09 64.3 57 52.6
AL8G14510 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.5e-08 63.5 62 46.8
BcaC03g14391 Brassica carinata HOM05D000051 ORTHO05D032210 1.5e-08 63.5 64 46.9
A10p11070 Brassica napus HOM05D000051 ORTHO05D000015 2.0e-08 63.2 57 50.9
BraA10t43199Z Brassica rapa HOM05D000051 ORTHO05D000015 2.0e-08 63.2 57 50.9
AL8G28380 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.6e-08 62.8 52 59.6
BolC2t07933H Brassica oleracea HOM05D000051 ORTHO05D032210 2.6e-08 62.8 51 54.9
AL6G33710 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 4.4e-08 62.0 92 38.0
A05p27190 Brassica napus HOM05D000051 ORTHO05D000015 4.4e-08 62.0 94 42.6
BraA05t21608Z Brassica rapa HOM05D000051 ORTHO05D000015 4.4e-08 62.0 94 42.6
CARHR190910 Cardamine hirsuta HOM05D000051 ORTHO05D000015 4.4e-08 62.0 65 49.2
AT5G53637 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.7e-08 61.6 66 48.5
A06p09830 Brassica napus HOM05D000051 ORTHO05D000015 5.7e-08 61.6 105 38.1
Thhalv10013474m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 5.7e-08 61.6 70 44.3
BcaC05g28161 Brassica carinata HOM05D000051 ORTHO05D000015 7.5e-08 61.2 53 52.8
Carub.0008s1387 Capsella rubella HOM05D000051 ORTHO05D000015 9.7e-08 60.8 81 44.4
BolC9t55607H Brassica oleracea HOM05D000051 ORTHO05D000015 1.3e-07 60.5 66 43.9
AL8G14470 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 1.7e-07 60.1 103 35.0
BraA09t37748Z Brassica rapa HOM05D000051 ORTHO05D033031 1.7e-07 60.1 63 47.6
Carub.0004s0585 Capsella rubella HOM05D000051 ORTHO05D000015 1.7e-07 60.1 64 50.0
Thhalv10001182m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.7e-07 60.1 64 45.3
BcaB08g34328 Brassica carinata HOM05D000537 ORTHO05D000415 2.2e-07 59.7 75 44.0
AT5G44970 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 2.8e-07 59.3 103 35.0
BcaC06g34496 Brassica carinata HOM05D000051 ORTHO05D000015 3.7e-07 58.9 103 35.9
BolC7t43318H Brassica oleracea HOM05D000051 ORTHO05D000015 3.7e-07 58.9 103 35.9
CARHR178130 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.7e-07 58.9 85 38.8
CARHR190920 Cardamine hirsuta HOM05D000051 ORTHO05D000015 3.7e-07 58.9 77 42.9
AL8G14530 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.3e-07 58.2 64 43.8
AL8G28580 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.3e-07 58.2 66 48.5
AL8G28590 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 6.3e-07 58.2 100 43.0
BcaB08g37454 Brassica carinata HOM05D000537 ORTHO05D000415 8.2e-07 57.8 75 41.3
A06p46820 Brassica napus HOM05D000051 ORTHO05D000015 8.2e-07 57.8 103 35.0
BraA06t24173Z Brassica rapa HOM05D000051 ORTHO05D000015 8.2e-07 57.8 105 37.1
Sp1g15070 Schrenkiella parvula HOM05D000051 ORTHO05D000015 8.2e-07 57.8 59 49.2
CARHR188550 Cardamine hirsuta HOM05D000051 ORTHO05D000015 1.1e-06 57.4 62 46.8
Thhalv10015662m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 1.1e-06 57.4 62 48.4
C07p27880 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-06 57.0 103 35.0
C08p46860 Brassica napus HOM05D000051 ORTHO05D000015 1.4e-06 57.0 77 40.3
BcaB08g37456 Brassica carinata HOM05D000051 ORTHO05D000015 1.8e-06 56.6 76 43.4
BcaC07g41622 Brassica carinata HOM05D000537 ORTHO05D000415 1.8e-06 56.6 77 44.2
A09p21480 Brassica napus HOM05D000051 ORTHO05D000015 1.8e-06 56.6 58 44.8
AL1G29120 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 2.4e-06 56.2 81 40.7
C03p12470 Brassica napus HOM05D000051 ORTHO05D000015 2.4e-06 56.2 89 42.7
Thhalv10000888m.g Eutrema salsugineum HOM05D000051 ORTHO05D000015 2.4e-06 56.2 80 38.8
BcaC06g31579 Brassica carinata HOM05D000051 ORTHO05D000015 3.1e-06 55.8 64 42.2
C09p43550 Brassica napus HOM05D000051 ORTHO05D000015 3.1e-06 55.8 51 49.0
BolC5t30229H Brassica oleracea HOM05D000051 ORTHO05D000015 3.1e-06 55.8 70 44.3
BraA03t10393Z Brassica rapa HOM05D000051 ORTHO05D000015 3.1e-06 55.8 103 40.8
Carub.0006s2038 Capsella rubella HOM05D000051 ORTHO05D000015 3.1e-06 55.8 62 46.8
AT1G51370 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.1e-06 55.5 95 35.8
AT5G22670 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 4.1e-06 55.5 83 39.8
BolC3t13716H Brassica oleracea HOM05D000051 ORTHO05D000015 4.1e-06 55.5 89 42.7
Carub.0001s1667 Capsella rubella HOM05D000051 ORTHO05D000015 4.1e-06 55.5 81 37.0
AT1G16930 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 5.3e-06 55.1 81 39.5
BolC8t52177H Brassica oleracea HOM05D000051 ORTHO05D000015 5.3e-06 55.1 80 42.5
CARHR014170 Cardamine hirsuta HOM05D000051 ORTHO05D000015 5.3e-06 55.1 91 40.7
AL1G25580 Arabidopsis lyrata HOM05D000051 ORTHO05D000015 7.0e-06 54.7 73 43.8
AT5G27750 Arabidopsis thaliana HOM05D000051 ORTHO05D000015 7.0e-06 54.7 106 33.0
A09p62770 Brassica napus HOM05D000051 ORTHO05D000015 7.0e-06 54.7 76 42.1
BolC8t52221H Brassica oleracea HOM05D000051 ORTHO05D000015 7.0e-06 54.7 75 41.3
BraA06t24444Z Brassica rapa HOM05D000051 ORTHO05D000015 7.0e-06 54.7 59 45.8
BraA09t41641Z Brassica rapa HOM05D000051 ORTHO05D000015 7.0e-06 54.7 76 42.1
A06p09880 Brassica napus HOM05D000051 ORTHO05D000015 9.1e-06 54.3 84 38.1
C05p11630 Brassica napus HOM05D000051 ORTHO05D000015 9.1e-06 54.3 107 32.7
BraA06t24176Z Brassica rapa HOM05D000051 ORTHO05D000015 9.1e-06 54.3 84 38.1


User provided reference genes

Program Settings