Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 7.5e-164 580.5 301 100.0
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 1.3e-160 569.7 302 98.0
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 7.3e-159 563.9 302 97.4
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 1.1e-154 550.1 301 94.0
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 1.2e-153 546.6 303 94.7
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 4.3e-151 538.1 301 92.0
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 8.1e-150 533.9 303 91.4
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 8.1e-150 533.9 303 91.4
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 8.1e-150 533.9 303 92.1
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 6.9e-149 530.8 303 91.1
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 6.9e-149 530.8 302 92.4
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 6.6e-144 514.2 309 87.7
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 5.6e-143 511.1 302 88.1
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 9.6e-143 510.4 302 88.1
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 2.1e-142 509.2 302 88.1
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 6.9e-141 504.2 302 87.7
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 1.1e-130 470.3 309 80.6
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 1.1e-119 433.7 312 73.7
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 7.4e-111 404.4 222 94.6
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 8.5e-99 364.4 221 88.7
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 8.8e-96 354.4 313 62.3
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 8.8e-96 354.4 297 64.3
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 5.3e-93 345.1 293 65.5
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 7.0e-93 344.7 308 62.0
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 7.0e-93 344.7 295 63.7
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 2.0e-92 343.2 215 78.1
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 4.5e-92 342.0 217 77.0
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 1.0e-91 340.9 247 70.9
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 1.3e-91 340.5 215 76.7
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 2.2e-91 339.7 268 65.3
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 5.0e-91 338.6 311 59.2
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 8.5e-91 337.8 294 62.6
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 8.5e-91 337.8 293 64.5
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 2.5e-90 336.3 303 61.1
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.2e-89 334.0 215 76.7
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 1.2e-89 334.0 237 71.7
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 1.2e-89 334.0 299 60.9
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 1.6e-89 333.6 204 78.9
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 1.6e-89 333.6 298 59.7
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.6e-89 333.6 297 62.3
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 2.1e-89 333.2 254 67.7
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 2.1e-89 333.2 254 68.1
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 2.1e-89 333.2 308 62.3
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 2.7e-89 332.8 290 63.1
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.0e-88 330.9 241 68.5
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 1.0e-88 330.9 290 62.8
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 1.4e-88 330.5 226 72.6
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 3.0e-88 329.3 235 70.6
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 6.7e-88 328.2 241 69.3
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 2.0e-87 326.6 215 75.3
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 3.3e-87 325.9 259 66.0
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 3.3e-87 325.9 233 70.0
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 3.3e-87 325.9 218 73.4
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 7.5e-87 324.7 287 62.4
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 9.7e-87 324.3 311 59.2
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 9.7e-87 324.3 218 72.9
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 1.7e-86 323.6 262 64.1
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 2.8e-86 322.8 241 68.5
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 2.8e-86 322.8 233 70.4
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 3.7e-86 322.4 257 64.6
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 4.8e-86 322.0 277 61.0
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 8.2e-86 321.2 280 62.5
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 4.1e-85 318.9 248 66.1
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 4.1e-85 318.9 199 76.4
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 2.7e-84 316.2 220 71.8
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 7.7e-84 314.7 289 59.9
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 1.3e-83 313.9 292 61.6
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 2.9e-83 312.8 294 58.8
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 8.5e-83 311.2 285 59.6
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.5e-82 310.5 253 62.8
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 1.9e-82 310.1 294 59.2
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 1.0e-80 304.3 284 59.9
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 1.4e-80 303.9 288 58.7
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 1.8e-80 303.5 255 63.1
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 3.0e-80 302.8 208 72.1
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 4.0e-80 302.4 285 57.2
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 4.0e-80 302.4 288 59.0
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 4.0e-80 302.4 282 58.9
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 9.8e-79 297.7 299 56.2
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 1.1e-77 294.3 223 65.5
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 7.0e-77 291.6 204 68.6
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 9.1e-77 291.2 282 57.8
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 1.2e-76 290.8 297 54.9
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 1.7e-75 287.0 220 65.0
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 5.5e-74 282.0 215 65.6
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 2.0e-71 273.5 183 72.7
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 1.7e-70 270.4 278 52.9
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 8.3e-70 268.1 205 63.9
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.4e-69 267.3 201 65.7
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 2.7e-68 263.1 257 56.8
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 5.6e-66 255.4 177 69.5
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 2.1e-65 253.4 278 54.0
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 2.8e-65 253.1 172 72.1
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 6.1e-65 251.9 245 55.1
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 7.8e-60 235.0 255 51.4
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 3.9e-59 232.6 218 58.3
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.6e-55 219.9 233 53.2
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.0e-51 208.0 155 68.4
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 5.2e-48 195.7 211 51.2
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 5.6e-42 175.6 149 59.7
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 1.8e-40 170.6 199 44.2
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 1.6e-36 157.5 213 39.9
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 4.3e-34 149.4 103 68.0
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 4.7e-33 146.0 110 69.1
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 5.3e-32 142.5 91 74.7
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 6.9e-32 142.1 109 62.4
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 2.0e-31 140.6 81 77.8
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 9.3e-29 131.7 203 36.9
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 5.1e-27 125.9 91 67.0
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 5.3e-24 115.9 77 71.4
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 2.6e-23 113.6 91 59.3
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 7.1e-21 105.5 112 54.5
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 2.5e-18 97.1 68 66.2
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 4.8e-17 92.8 72 63.9
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 1.8e-16 90.9 71 67.6
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 6.9e-16 89.0 58 74.1
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.2e-15 88.2 69 60.9
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 1.5e-15 87.8 60 66.7
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 3.7e-09 66.6 57 57.9
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 2.6e-07 60.5 99 33.3


User provided reference genes

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