Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL7G25850 Arabidopsis lyrata HOM05D006843 ORTHO05D008517 1.3e-188 662.9 343 100.0
AT4G26980 Arabidopsis thaliana HOM05D006843 ORTHO05D008517 1.9e-171 605.9 345 92.8
Carub.0007s1386 Capsella rubella HOM05D006843 ORTHO05D008517 2.3e-164 582.4 344 87.8
Thhalv10025611m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 4.9e-159 564.7 345 85.8
CARHR234590 Cardamine hirsuta HOM05D006843 ORTHO05D008517 1.3e-156 556.6 342 85.1
A03p56990 Brassica napus HOM05D006843 ORTHO05D008517 2.4e-150 535.8 347 81.3
C07p55080 Brassica napus HOM05D006843 ORTHO05D008517 1.7e-148 529.6 347 80.1
BcaC06g32719 Brassica carinata HOM05D006843 ORTHO05D008517 2.4e-145 519.2 348 79.3
Aa31LG5G10440 Aethionema arabicum HOM05D006843 ORTHO05D008517 6.2e-138 494.6 344 75.9
THA.LOC104809268 Tarenaya hassleriana HOM05D006843 ORTHO05D008517 1.1e-131 473.8 346 72.3
Gohir.D01G067100 Gossypium hirsutum HOM05D006843 ORTHO05D008517 8.7e-124 447.6 335 70.4
Gohir.A01G079900 Gossypium hirsutum HOM05D006843 ORTHO05D008517 2.5e-123 446.0 335 69.9
Thecc.07G035800 Theobroma cacao HOM05D006843 ORTHO05D008517 3.3e-123 445.7 335 69.3
Gorai.002G089000 Gossypium raimondii HOM05D006843 ORTHO05D008517 5.6e-123 444.9 335 69.9
Duzib268G1400 Durio zibethinus HOM05D006843 ORTHO05D008517 4.5e-120 435.3 335 68.7
BraA03t14769Z Brassica rapa HOM05D006843 ORTHO05D008517 1.1e-118 430.6 271 81.9
BolC7t46005H Brassica oleracea HOM05D006843 ORTHO05D008517 7.1e-118 427.9 267 81.6
Cpa.g.sc12.302 Carica papaya HOM05D006843 ORTHO05D008517 3.0e-116 422.5 339 66.1
Actinidia05093 Actinidia chinensis HOM05D006843 ORTHO05D008517 1.5e-115 420.2 339 64.0
CSS0043197 Camellia sinensis var. sinensis HOM05D006843 ORTHO05D008517 2.5e-115 419.5 338 64.2
Manes.03G129700 Manihot esculenta HOM05D006843 ORTHO05D008517 1.1e-113 414.1 343 63.8
GSVIVG01037656001 Vitis vinifera HOM05D006843 ORTHO05D008517 3.4e-112 409.1 342 62.6
Rhsim06G0217400 Rhododendron simsii HOM05D006843 ORTHO05D008517 2.9e-111 406.0 340 62.6
Prupe.4G214500 Prunus persica HOM05D006843 ORTHO05D008517 6.5e-111 404.8 338 62.4
Cfa020337 Carpinus fangiana HOM05D006843 ORTHO05D008517 1.4e-110 403.7 336 62.5
Hma1.2p1_0673F.1_g201400 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 1.2e-109 400.6 303 66.0
Ciclev10008752m.g Citrus clementina HOM05D006843 ORTHO05D008517 3.5e-109 399.1 344 61.9
Haze_09681 Corylus avellana HOM05D006843 ORTHO05D008517 3.5e-109 399.1 336 61.9
TAR624G1415 Trochodendron aralioides HOM05D006843 ORTHO05D008517 7.9e-109 397.9 340 62.6
MELO3C013160.2 Cucumis melo HOM05D006843 ORTHO05D008517 1.0e-108 397.5 301 66.4
CiPaw.11G190100 Carya illinoinensis HOM05D006843 ORTHO05D008517 1.3e-108 397.1 338 61.8
TWI39G1240 Tripterygium wilfordii HOM05D006843 ORTHO05D008517 1.8e-108 396.7 337 62.0
CsaV3_7G021850 Cucumis sativus L. HOM05D006843 ORTHO05D008517 2.3e-108 396.4 301 66.4
Dinv22258 Davidia involucrata HOM05D006843 ORTHO05D008517 1.5e-107 393.7 327 63.3
Potri.011G090700 Populus trichocarpa HOM05D006843 ORTHO05D008517 2.5e-107 392.9 352 59.1
QL08p010009 Quercus lobata HOM05D006843 ORTHO05D008517 4.3e-107 392.1 334 62.3
Cc05_g13830 Coffea canephora HOM05D006843 ORTHO05D008517 9.7e-107 391.0 332 59.0
ClCG09G010830 Citrullus lanatus HOM05D006843 ORTHO05D008517 1.3e-106 390.6 330 62.1
PGR083G2310 Punica granatum HOM05D006843 ORTHO05D008517 1.3e-106 390.6 318 63.2
Sc03g0008560 Simmondsia chinensis HOM05D006843 ORTHO05D008517 2.2e-106 389.8 331 61.9
HanXRQChr11g0337271 Helianthus annuus HOM05D006843 ORTHO05D008517 1.8e-105 386.7 342 60.8
MSTRG.6924 Avicennia marina HOM05D006843 ORTHO05D008517 6.9e-105 384.8 342 58.2
CiPaw.12G130200 Carya illinoinensis HOM05D006843 ORTHO05D008517 6.9e-105 384.8 336 61.0
arahy.Tifrunner.gnm1.ann1.Q92UKX Arachis hypogaea HOM05D006843 ORTHO05D008517 2.0e-104 383.3 340 59.4
Glyma.14G022900 Glycine max HOM05D006843 ORTHO05D008517 2.0e-104 383.3 338 58.9
Nn1g03519 Nelumbo nucifera HOM05D006843 ORTHO05D008517 4.5e-104 382.1 340 59.7
MD11G1217200 Malus domestica HOM05D006843 ORTHO05D008517 5.9e-104 381.7 338 58.9
arahy.Tifrunner.gnm1.ann1.J1CT6Y Arachis hypogaea HOM05D006843 ORTHO05D008517 7.7e-104 381.3 340 59.4
CANSAT11G0475 Cannabis sativa HOM05D006843 ORTHO05D008517 7.7e-104 381.3 303 66.0
Glyma.02G291800 Glycine max HOM05D006843 ORTHO05D008517 6.5e-103 378.3 338 58.9
arahy.Tifrunner.gnm1.ann1.0IA02T Arachis hypogaea HOM05D006843 ORTHO05D008517 8.5e-103 377.9 340 59.1
arahy.Tifrunner.gnm1.ann1.57CCTN Arachis hypogaea HOM05D006843 ORTHO05D008517 8.5e-103 377.9 340 59.1
arahy.Tifrunner.gnm1.ann1.BV1YAY Arachis hypogaea HOM05D006843 ORTHO05D008517 8.5e-103 377.9 340 59.1
arahy.Tifrunner.gnm1.ann1.H57FKH Arachis hypogaea HOM05D006843 ORTHO05D008517 8.5e-103 377.9 340 59.1
PGSC0003DMG402022316 Solanum tuberosum HOM05D006843 ORTHO05D008517 1.4e-102 377.1 319 58.9
LjContig00272g0007634 Lotus japonicus HOM05D006843 ORTHO05D008517 4.2e-102 375.6 342 59.4
Lsat_1_v5_gn_7_109981 Lactuca sativa HOM05D006843 ORTHO05D008517 7.2e-102 374.8 317 61.5
Nitab4.5_0003495g0070 Nicotiana tabacum HOM05D006843 ORTHO05D008517 7.2e-102 374.8 308 61.4
Nitab4.5_0007360g0010 Nicotiana tabacum HOM05D006843 ORTHO05D008517 3.6e-101 372.5 297 63.0
Sabra11G0086300 Salix brachista HOM05D006843 ORTHO05D008517 3.6e-101 372.5 341 58.7
Medtr5g092970 Medicago truncatula HOM05D006843 ORTHO05D008517 4.6e-101 372.1 302 61.3
Peaxi162Scf00235g00218 Petunia axillaris HOM05D006843 ORTHO05D008517 4.6e-101 372.1 303 62.4
Ah.04g165900 Amaranthus hybridus HOM05D006843 ORTHO05D008517 6.1e-101 371.7 338 58.3
AUR62015782 Chenopodium quinoa HOM05D006843 ORTHO05D008517 7.9e-101 371.3 338 59.8
Ca_06326_v3 Cicer arietinum L. HOM05D006843 ORTHO05D008517 7.9e-101 371.3 343 57.4
Solyc07g064630.4 Solanum lycopersicum HOM05D006843 ORTHO05D008517 5.1e-100 368.6 304 61.2
Migut.M01756 Erythranthe guttata HOM05D006843 ORTHO05D008517 8.8e-100 367.9 338 56.8
TPR.G1211 Trifolium pratense HOM05D006843 ORTHO05D008517 1.5e-99 367.1 343 55.7
MBI18_g14135_MAGBIO Magnolia biondii HOM05D006843 ORTHO05D008517 2.5e-99 366.3 341 55.7
Phvul.008G268300 Phaseolus vulgaris HOM05D006843 ORTHO05D008517 2.5e-99 366.3 339 58.1
Aqoxy4G01855 Aquilegia oxysepala HOM05D006843 ORTHO05D008517 4.3e-99 365.5 343 55.7
ECA236G1023 Erigeron canadensis HOM05D006843 ORTHO05D008517 4.3e-99 365.5 305 62.6
Eucgr.F00758 Eucalyptus grandis HOM05D006843 ORTHO05D008517 9.7e-99 364.4 304 61.5
Lalb_Chr04g0248381 Lupinus albus HOM05D006843 ORTHO05D008517 9.7e-99 364.4 340 57.6
Sed0013659 Sechium edule HOM05D006843 ORTHO05D008517 1.3e-98 364.0 335 59.7
FAN16G2069 Fragaria x ananassa HOM05D006843 ORTHO05D008517 8.2e-98 361.3 337 57.9
FvH4_3g22820 Fragaria vesca HOM05D006843 ORTHO05D008517 1.1e-97 360.9 337 57.6
FAN25G2076 Fragaria x ananassa HOM05D006843 ORTHO05D008517 3.1e-97 359.4 301 61.8
Sopen07g032830 Solanum pennellii HOM05D006843 ORTHO05D008517 3.1e-97 359.4 311 59.5
VMungo0647G1675 Vigna mungo HOM05D006843 ORTHO05D008517 5.3e-97 358.6 341 59.5
RcHm_v2.0_Chr5g0040061 Rosa chinensis HOM05D006843 ORTHO05D008517 9.1e-97 357.8 337 57.0
Psat2g011720 Pisum sativum HOM05D006843 ORTHO05D008517 1.2e-96 357.5 335 56.4
SGA_v2.0_scaffold165G38275 Striga asiatica HOM05D006843 ORTHO05D008517 1.4e-94 350.5 355 53.0
Hma1.2p1_0673F.1_g201390 Hydrangea macrophylla HOM05D006843 ORTHO05D008517 9.4e-94 347.8 303 59.7
EL10Ac4g07802 Beta vulgaris HOM05D006843 ORTHO05D008517 5.1e-92 342.0 388 51.0
DCAR_012722 Daucus carota HOM05D006843 ORTHO05D008517 3.7e-90 335.9 335 56.1
CAN.G337.136 Capsicum annuum HOM05D006843 ORTHO05D008517 1.2e-88 330.9 265 61.1
Thhalv10026846m.g Eutrema salsugineum HOM05D006843 ORTHO05D008517 2.9e-87 326.2 269 68.8
Lj8A169G88 Lonicera japonica HOM05D006843 ORTHO05D008517 1.4e-86 323.9 298 58.1
unitig_8.g4621 Utricularia gibba HOM05D006843 ORTHO05D008517 1.0e-84 317.8 367 49.9
PSO063G3629 Papaver somniferum HOM05D006843 ORTHO05D008517 1.5e-83 313.9 345 52.2
Zm00001eb224560 Zea mays HOM05D006843 ORTHO05D008517 2.6e-83 313.2 270 58.5
PSO170G2271 Papaver somniferum HOM05D006843 ORTHO05D008517 6.3e-82 308.5 345 51.3
HPP92_013325 Vanilla planifolia HOM05D006843 ORTHO05D008517 2.4e-81 306.6 322 49.1
Zm00001eb273720 Zea mays HOM05D006843 ORTHO05D008517 3.2e-78 296.2 275 57.1
AUR62020435 Chenopodium quinoa HOM05D006843 ORTHO05D008517 2.7e-77 293.1 372 48.4
Pp3c9_17980 Physcomitrium patens HOM05D006843 ORTHO05D008517 8.8e-76 288.1 305 52.1
Mapoly0001s0246 Marchantia polymorpha HOM05D006843 ORTHO05D008517 2.7e-72 276.6 300 50.0
SMO234G0011 Selaginella moellendorffii HOM05D006843 ORTHO05D008517 1.3e-55 221.1 259 47.9
CBR_g34195 Chara braunii HOM05D006843 ORTHO05D008517 2.9e-55 219.9 362 37.6
Hund02000 Selenicereus undatus HOM05D006843 ORTHO05D008517 1.0e-47 194.9 202 55.9
Atru.chr2.3418 Acer truncatum HOM05D006843 ORTHO05D008517 4.3e-46 189.5 133 67.7
ATR0490G005 Amborella trichopoda HOM05D006843 ORTHO05D008517 4.0e-44 183.0 182 53.3
Psat4g156200 Pisum sativum HOM05D006843 ORTHO05D008517 3.9e-39 166.4 128 60.9
Psat5g064560 Pisum sativum HOM05D006843 ORTHO05D008517 8.6e-39 165.2 128 60.2
Psat7g029280 Pisum sativum HOM05D006843 ORTHO05D008517 7.3e-38 162.2 128 58.6
vmacro11722 Vaccinium macrocarpon HOM05D006843 ORTHO05D008517 2.1e-37 160.6 185 50.3
Haze_01866 Corylus avellana HOM05D006843 ORTHO05D008517 1.3e-34 151.4 194 45.4
Dinv20052 Davidia involucrata HOM05D002890 ORTHO05D005855 1.3e-34 151.4 122 64.8
Os06g0679700 Oryza sativa ssp. japonica HOM05D006843 ORTHO05D008517 4.1e-33 146.4 157 47.1
Psat3g185160 Pisum sativum HOM05D006843 ORTHO05D008517 3.3e-22 110.2 106 54.7
CDE02G2447 Ceratophyllum demersum HOM05D006843 ORTHO05D008517 1.3e-21 108.2 241 34.0
Psat3g153160 Pisum sativum HOM05D006816 ORTHO05D008517 2.8e-21 107.1 89 58.4
MCO05G180 Micromonas commoda HOM05D006843 ORTHO05D008517 6.9e-20 102.4 244 28.7
Dinv20053 Davidia involucrata HOM05D006843 ORTHO05D008517 4.0e-12 76.6 119 42.0
Psat7g126680 Pisum sativum HOM05D006843 ORTHO05D008517 3.8e-10 70.1 62 54.8
ATR0926G001 Amborella trichopoda HOM05D006843 ORTHO05D008517 9.3e-09 65.5 56 57.1


User provided reference genes

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