Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G41660 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 3.0e-193 678.3 343 100.0
AT4G08900 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 9.7e-192 673.3 343 98.8
Carub.0006s2738 Capsella rubella HOM05D004324 ORTHO05D004840 1.5e-187 659.4 343 97.1
CARHR259850 Cardamine hirsuta HOM05D004324 ORTHO05D004840 2.3e-185 652.1 343 95.9
Sp6g08900 Schrenkiella parvula HOM05D004324 ORTHO05D004840 2.6e-184 648.7 339 95.6
A03p28290 Brassica napus HOM05D004324 ORTHO05D004840 4.1e-182 641.3 339 94.1
BcaB01g02843 Brassica carinata HOM05D004324 ORTHO05D004840 5.4e-182 641.0 343 94.5
BraA03t12035Z Brassica rapa HOM05D004324 ORTHO05D004840 7.0e-182 640.6 339 94.1
C03p34220 Brassica napus HOM05D004324 ORTHO05D004840 1.6e-181 639.4 339 93.8
BcaC01g04748 Brassica carinata HOM05D004324 ORTHO05D004840 3.5e-181 638.3 339 93.8
BolC3t15731H Brassica oleracea HOM05D004324 ORTHO05D004840 3.5e-181 638.3 339 93.5
Aa31LG9G14610 Aethionema arabicum HOM05D004324 ORTHO05D004840 1.5e-179 632.9 343 93.9
THA.LOC104826515 Tarenaya hassleriana HOM05D004324 ORTHO05D004840 8.3e-175 617.1 340 91.2
Lsat_1_v5_gn_4_43080 Lactuca sativa HOM05D004324 ORTHO05D004840 1.1e-174 616.7 339 90.6
Thhalv10028793m.g Eutrema salsugineum HOM05D004324 ORTHO05D004840 3.1e-174 615.1 343 92.1
Aqoxy7G00682 Aquilegia oxysepala HOM05D004324 ORTHO05D004840 4.5e-173 611.3 338 89.6
Ciclev10021006m.g Citrus clementina HOM05D004324 ORTHO05D004840 4.5e-173 611.3 343 89.2
Potri.002G146200 Populus trichocarpa HOM05D004324 ORTHO05D004840 1.3e-172 609.8 340 90.0
HanXRQChr16g0519961 Helianthus annuus HOM05D004324 ORTHO05D004840 6.6e-172 607.4 343 88.6
RcHm_v2.0_Chr1g0349771 Rosa chinensis HOM05D004324 ORTHO05D004840 6.6e-172 607.4 340 90.3
ECA234G2725 Erigeron canadensis HOM05D004324 ORTHO05D004840 1.9e-171 605.9 339 89.4
MD07G1119200 Malus domestica HOM05D004324 ORTHO05D004840 4.3e-171 604.7 340 90.0
FAN03G2758 Fragaria x ananassa HOM05D004324 ORTHO05D004840 5.6e-171 604.4 340 89.7
FAN06G1729 Fragaria x ananassa HOM05D004324 ORTHO05D004840 5.6e-171 604.4 340 89.7
FAN06G4220 Fragaria x ananassa HOM05D004324 ORTHO05D004840 5.6e-171 604.4 340 89.7
Hma1.2p1_0442F.1_g153860 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 7.3e-171 604.0 337 89.0
FAN01G0081 Fragaria x ananassa HOM05D004324 ORTHO05D004840 9.5e-171 603.6 340 89.7
Manes.01G267300 Manihot esculenta HOM05D004324 ORTHO05D004840 1.6e-170 602.8 340 88.5
Eucgr.E01445 Eucalyptus grandis HOM05D004324 ORTHO05D004840 2.8e-170 602.1 339 88.8
Prupe.2G142300 Prunus persica HOM05D004324 ORTHO05D004840 2.8e-170 602.1 340 88.5
Peaxi162Scf00013g03018 Petunia axillaris HOM05D004324 ORTHO05D004840 3.6e-170 601.7 341 88.3
Gorai.009G265900 Gossypium raimondii HOM05D004324 ORTHO05D004840 6.1e-170 600.9 337 89.6
Manes.05G047100 Manihot esculenta HOM05D004324 ORTHO05D004840 8.0e-170 600.5 340 88.8
Potri.014G067700 Populus trichocarpa HOM05D004324 ORTHO05D004840 8.0e-170 600.5 336 89.6
Cpa.g.sc145.18 Carica papaya HOM05D004324 ORTHO05D004840 1.0e-169 600.1 339 88.8
Atru.chr5.282 Acer truncatum HOM05D004324 ORTHO05D004840 1.4e-169 599.7 343 87.8
Gohir.D05G254400 Gossypium hirsutum HOM05D004324 ORTHO05D004840 1.4e-169 599.7 337 89.3
PGR042G0702 Punica granatum HOM05D004324 ORTHO05D004840 1.8e-169 599.4 340 87.9
EL10Ac1g00868 Beta vulgaris HOM05D004324 ORTHO05D004840 4.0e-169 598.2 339 88.5
Nitab4.5_0000457g0100 Nicotiana tabacum HOM05D004324 ORTHO05D004840 4.0e-169 598.2 341 87.4
Nn1g01122 Nelumbo nucifera HOM05D004324 ORTHO05D004840 6.8e-169 597.4 338 87.9
CiPaw.01G263900 Carya illinoinensis HOM05D004324 ORTHO05D004840 8.9e-169 597.0 339 88.8
Actinidia12245 Actinidia chinensis HOM05D004324 ORTHO05D004840 1.5e-168 596.3 338 88.8
QL08p052832 Quercus lobata HOM05D004324 ORTHO05D004840 1.5e-168 596.3 338 89.1
Sopen01g036910 Solanum pennellii HOM05D004324 ORTHO05D004840 1.5e-168 596.3 341 87.4
Solyc01g091160.4 Solanum lycopersicum HOM05D004324 ORTHO05D004840 2.6e-168 595.5 338 87.9
TWI59G0845 Tripterygium wilfordii HOM05D004324 ORTHO05D004840 2.6e-168 595.5 340 87.6
COL.COLO4_24610 Corchorus olitorius HOM05D004324 ORTHO05D004840 3.4e-168 595.1 340 87.6
Sc26g0001240 Simmondsia chinensis HOM05D004324 ORTHO05D004840 3.4e-168 595.1 337 88.4
Thecc.08G173500 Theobroma cacao HOM05D004324 ORTHO05D004840 3.4e-168 595.1 343 87.5
vmacro13417 Vaccinium macrocarpon HOM05D004324 ORTHO05D004840 4.4e-168 594.7 341 86.2
CANSAT56G0022 Cannabis sativa HOM05D004324 ORTHO05D004840 5.8e-168 594.3 339 88.2
Nitab4.5_0010616g0050 Nicotiana tabacum HOM05D004324 ORTHO05D004840 7.5e-168 594.0 341 86.8
Dinv32365 Davidia involucrata HOM05D004324 ORTHO05D004840 1.7e-167 592.8 338 87.9
Duzib177G0253 Durio zibethinus HOM05D004324 ORTHO05D004840 2.2e-167 592.4 339 87.0
GSVIVG01027662001 Vitis vinifera HOM05D004324 ORTHO05D004840 2.2e-167 592.4 338 87.9
CAN.G388.33 Capsicum annuum HOM05D004324 ORTHO05D004840 3.7e-167 591.7 340 86.5
Duzib268G1605 Durio zibethinus HOM05D004324 ORTHO05D004840 6.4e-167 590.9 339 87.3
SalBow5G2819 Salvia bowleyana HOM05D004324 ORTHO05D004840 8.3e-167 590.5 341 86.5
MSTRG.17174 Avicennia marina HOM05D004324 ORTHO05D004840 1.1e-166 590.1 343 85.1
Cc02_g24110 Coffea canephora HOM05D004324 ORTHO05D004840 1.1e-166 590.1 341 86.5
Os04g0106300 Oryza sativa ssp. japonica HOM05D004324 ORTHO05D004840 1.9e-166 589.3 335 87.5
AT4G08870 Arabidopsis thaliana HOM05D004324 ORTHO05D004840 4.1e-166 588.2 342 86.3
HPP92_007375 Vanilla planifolia HOM05D004324 ORTHO05D004840 4.1e-166 588.2 338 86.1
Thecc.08G173700 Theobroma cacao HOM05D004324 ORTHO05D004840 7.0e-166 587.4 343 85.4
RcHm_v2.0_Chr1g0349751 Rosa chinensis HOM05D004324 ORTHO05D004840 9.2e-166 587.0 339 87.6
Migut.B01616 Erythranthe guttata HOM05D004324 ORTHO05D004840 1.2e-165 586.6 339 86.1
DCAR_008551 Daucus carota HOM05D004324 ORTHO05D004840 1.6e-165 586.3 328 89.0
PSO782G5694 Papaver somniferum HOM05D004324 ORTHO05D004840 1.6e-165 586.3 339 86.4
TAR375G0703 Trochodendron aralioides HOM05D004324 ORTHO05D004840 2.7e-165 585.5 339 86.7
CSS0015452 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 6.0e-165 584.3 339 85.8
CSS0042374 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 6.0e-165 584.3 339 85.8
Rhsim07G0029000 Rhododendron simsii HOM05D004324 ORTHO05D004840 6.0e-165 584.3 362 81.8
Hund27368 Selenicereus undatus HOM05D004324 ORTHO05D004840 6.0e-165 584.3 328 88.1
Sc26g0001250 Simmondsia chinensis HOM05D004324 ORTHO05D004840 6.0e-165 584.3 331 88.8
Lalb_Chr12g0208141 Lupinus albus HOM05D004324 ORTHO05D004840 7.8e-165 583.9 339 86.4
SGA_v2.0_scaffold153G36989 Striga asiatica HOM05D004324 ORTHO05D004840 1.7e-164 582.8 338 85.8
Lj3g0015076 Lotus japonicus HOM05D004324 ORTHO05D004840 3.0e-164 582.0 340 85.0
TPR.G7599 Trifolium pratense HOM05D004324 ORTHO05D004840 3.9e-164 581.6 339 85.8
Psat0s3070g0160 Pisum sativum HOM05D004324 ORTHO05D004840 5.0e-164 581.3 339 85.3
Carub.0006s2736 Capsella rubella HOM05D004324 ORTHO05D004840 6.6e-164 580.9 342 84.5
Glyma.17G131300 Glycine max HOM05D004324 ORTHO05D004840 6.6e-164 580.9 340 86.2
PSO478G0881 Papaver somniferum HOM05D004324 ORTHO05D004840 6.6e-164 580.9 339 85.8
Ca_19938_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 8.6e-164 580.5 339 85.8
ClCG06G000480 Citrullus lanatus HOM05D004324 ORTHO05D004840 1.1e-163 580.1 340 85.3
AUR62013655 Chenopodium quinoa HOM05D004324 ORTHO05D004840 1.5e-163 579.7 339 84.4
Glyma.01G140200 Glycine max HOM05D004324 ORTHO05D004840 5.6e-163 577.8 340 85.6
CSS0002473 Camellia sinensis var. sinensis HOM05D004324 ORTHO05D004840 7.3e-163 577.4 315 91.1
SHI13535 Sapria himalayana HOM05D004324 ORTHO05D004840 7.3e-163 577.4 338 86.1
ATR0665G432 Amborella trichopoda HOM05D004324 ORTHO05D004840 2.1e-162 575.9 332 85.8
CDE04G0300 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 2.8e-162 575.5 330 86.1
Sopen01g036920 Solanum pennellii HOM05D004324 ORTHO05D004840 2.8e-162 575.5 341 84.8
CsaV3_6G006290 Cucumis sativus L. HOM05D004324 ORTHO05D004840 3.6e-162 575.1 340 84.7
Phvul.010G081600 Phaseolus vulgaris HOM05D004324 ORTHO05D004840 3.6e-162 575.1 340 85.6
Solyc01g091170.3 Solanum lycopersicum HOM05D004324 ORTHO05D004840 6.2e-162 574.3 341 84.5
Oeu055504.4 Olea europaea HOM05D004324 ORTHO05D004840 8.0e-162 573.9 378 78.6
Sed0016777 Sechium edule HOM05D004324 ORTHO05D004840 1.4e-161 573.2 340 84.4
AUR62004190 Chenopodium quinoa HOM05D004324 ORTHO05D004840 6.8e-161 570.9 339 82.9
unitig_899.g15094 Utricularia gibba HOM05D004324 ORTHO05D004840 2.0e-160 569.3 327 85.9
arahy.Tifrunner.gnm1.ann1.2VF8XD Arachis hypogaea HOM05D004324 ORTHO05D004840 1.2e-157 560.1 370 78.6
Haze_16793 Corylus avellana HOM05D004324 ORTHO05D004840 1.6e-157 559.7 360 80.0
CiPaw.02G169300 Carya illinoinensis HOM05D004324 ORTHO05D004840 5.6e-155 551.2 328 83.8
SEGI_09298 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 1.2e-154 550.1 339 80.8
arahy.Tifrunner.gnm1.ann1.J6F3FE Arachis hypogaea HOM05D004324 ORTHO05D004840 6.2e-154 547.7 394 73.9
Mapoly0082s0038 Marchantia polymorpha HOM05D004324 ORTHO05D004840 1.4e-153 546.6 322 82.3
Lj3g0002034 Lotus japonicus HOM05D004324 ORTHO05D004840 5.2e-153 544.7 339 78.8
Ah.05g174550 Amaranthus hybridus HOM05D004324 ORTHO05D004840 1.7e-148 529.6 343 77.0
Lj3g0008609 Lotus japonicus HOM05D004324 ORTHO05D004840 3.9e-148 528.5 340 77.1
Medtr4g024960 Medicago truncatula HOM05D004324 ORTHO05D004840 5.1e-148 528.1 339 77.6
SMO367G0287 Selaginella moellendorffii HOM05D004324 ORTHO05D004840 1.1e-147 526.9 333 78.1
Glyma.03G028000 Glycine max HOM05D004324 ORTHO05D004840 1.9e-147 526.2 342 74.9
Lj7A531T56 Lonicera japonica HOM05D004324 ORTHO05D004840 1.6e-146 523.1 339 79.6
Lj3g0012371 Lotus japonicus HOM05D004324 ORTHO05D004840 1.3e-143 513.5 338 75.1
TPR.G7597 Trifolium pratense HOM05D004324 ORTHO05D004840 1.3e-143 513.5 343 75.2
Pp3c5_2190 Physcomitrium patens HOM05D004324 ORTHO05D004840 4.7e-138 495.0 313 76.7
HanXRQChr16g0519941 Helianthus annuus HOM05D004324 ORTHO05D004840 2.6e-136 489.2 339 72.0
CBR_g50887 Chara braunii HOM05D004324 ORTHO05D004840 1.1e-134 483.8 336 71.4
Psat7g231720 Pisum sativum HOM05D004324 ORTHO05D004840 1.5e-123 446.8 317 68.8
Dinv43690 Davidia involucrata HOM05D004324 ORTHO05D004840 1.5e-120 436.8 339 70.2
COL.COLO4_24608 Corchorus olitorius HOM05D004324 ORTHO05D004840 4.5e-120 435.3 336 68.2
MELO3C022492.2 Cucumis melo HOM05D004324 ORTHO05D004840 7.9e-117 424.5 239 87.4
Sed0023731 Sechium edule HOM05D004324 ORTHO05D004840 2.5e-115 419.5 253 83.0
Atru.chr5.284 Acer truncatum HOM05D004324 ORTHO05D004840 3.3e-115 419.1 255 82.7
Hma1.2p1_0375F.1_g138670 Hydrangea macrophylla HOM05D004324 ORTHO05D004840 5.8e-112 408.3 245 84.1
SEGI_04392 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 1.0e-111 407.5 253 80.2
arahy.Tifrunner.gnm1.ann1.J17N2W Arachis hypogaea HOM05D004324 ORTHO05D004840 1.6e-109 400.2 333 64.9
Zm00001eb418690 Zea mays HOM05D004324 ORTHO05D004840 4.8e-106 388.7 208 92.3
Medtr4g024940 Medicago truncatula HOM05D004324 ORTHO05D004840 1.7e-103 380.2 231 82.3
MBI04_g35670_MAGBIO Magnolia biondii HOM05D004324 ORTHO05D004840 2.9e-103 379.4 220 85.5
FvH4_7g11450 Fragaria vesca HOM05D004324 ORTHO05D004840 5.0e-103 378.6 220 86.8
AL6G42680 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 2.4e-97 359.8 194 91.8
Psat6g218040 Pisum sativum HOM05D004324 ORTHO05D004840 8.5e-95 351.3 309 58.3
AagrBONN_evm.TU.Sc2ySwM_368.1743 Anthoceros agrestis HOM05D004324 ORTHO05D004840 5.7e-91 338.6 199 82.4
Gohir.A05G252532 Gossypium hirsutum HOM05D004324 ORTHO05D004840 2.8e-90 336.3 191 87.4
Medtr0088s0100 Medicago truncatula HOM05D004324 ORTHO05D004840 3.6e-85 319.3 320 55.0
SGA_v2.0_scaffold11G05569 Striga asiatica HOM05D004324 ORTHO05D004840 5.9e-80 302.0 242 63.6
Sc26g0001270 Simmondsia chinensis HOM05D004324 ORTHO05D004840 2.1e-77 293.5 171 84.8
Psat6g218080 Pisum sativum HOM05D004324 ORTHO05D004840 1.3e-74 284.3 195 69.2
Gohir.A05G252466 Gossypium hirsutum HOM05D004324 ORTHO05D004840 5.0e-63 245.7 135 91.1
RcHm_v2.0_Chr1g0349761 Rosa chinensis HOM05D004324 ORTHO05D004840 5.5e-62 242.3 146 84.9
AL6G42730 Arabidopsis lyrata HOM05D004324 ORTHO05D004840 3.4e-59 233.0 148 79.1
Psat6g217960 Pisum sativum HOM05D004324 ORTHO05D004840 3.4e-51 206.5 155 65.8
CDE02G4314 Ceratophyllum demersum HOM05D004324 ORTHO05D004840 1.9e-46 190.7 148 69.6
arahy.Tifrunner.gnm1.ann1.V33WN8 Arachis hypogaea HOM05D004324 ORTHO05D004840 2.3e-39 167.2 87 93.1
Actinidia02863 Actinidia chinensis HOM05D004324 ORTHO05D004840 2.0e-35 154.1 101 77.2
Duzib177G0443 Durio zibethinus HOM05D004324 ORTHO05D004840 3.7e-34 149.8 101 78.2
MD02G1206600 Malus domestica HOM05D004324 ORTHO05D004840 4.1e-33 146.4 96 75.0
CAN.G112.16 Capsicum annuum HOM05D004324 ORTHO05D004840 1.2e-32 144.8 87 82.8
SEGI_10460 Sequoiadendron giganteum HOM05D004324 ORTHO05D004840 4.6e-32 142.9 104 70.2
MD02G1206500 Malus domestica HOM05D004324 ORTHO05D004840 6.0e-32 142.5 74 93.2
CAN.G23.23 Capsicum annuum HOM05D004324 ORTHO05D004840 6.6e-31 139.0 78 83.3
Sc26g0001260 Simmondsia chinensis HOM05D004324 ORTHO05D004840 8.7e-23 112.1 127 54.3
Duzib106G1980 Durio zibethinus HOM05D004324 ORTHO05D004840 4.3e-22 109.8 130 48.5
Prupe.7G087800 Prunus persica HOM05D004324 ORTHO05D004840 3.6e-21 106.7 124 55.6
Actinidia02867 Actinidia chinensis HOM05D004324 ORTHO05D004840 4.0e-20 103.2 107 56.1
Pp3s30_709 Physcomitrium patens HOM05D004324 ORTHO05D004840 1.2e-19 101.7 234 31.2
MCO07G634 Micromonas commoda HOM05D004324 ORTHO05D004840 1.5e-19 101.3 283 30.0
Actinidia31395 Actinidia chinensis HOM05D004324 ORTHO05D004840 4.9e-18 96.3 76 68.4
Psat0s13993g0040 Pisum sativum HOM05D004324 ORTHO05D004840 2.4e-17 94.0 74 64.9
Ca_28979_v3 Cicer arietinum L. HOM05D004324 ORTHO05D004840 4.2e-17 93.2 281 29.2
Cfa025533 Carpinus fangiana HOM05D000146 ORTHO05D004840 4.6e-16 89.7 320 26.6
Cfa023222 Carpinus fangiana HOM05D004324 ORTHO05D004840 1.7e-15 87.8 268 30.2
Actinidia02866 Actinidia chinensis HOM05D004324 ORTHO05D004840 5.8e-11 72.8 103 45.6
Prupe.2G076400 Prunus persica HOM05D004324 ORTHO05D004840 2.9e-10 70.5 53 69.8
Aa31sc49G50 Aethionema arabicum HOM05D004324 ORTHO05D004840 4.2e-09 66.6 45 75.6
Cfa024978 Carpinus fangiana HOM05D004324 ORTHO05D034102 3.5e-08 63.5 190 26.8
Medtr4g019730 Medicago truncatula HOM05D000814 ORTHO05D004840 6.7e-07 59.3 42 66.7


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