Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G34580 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 4.5e-121 438.0 223 100.0
AT5G23320 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 6.9e-114 414.1 223 93.7
Carub.0006s2109 Capsella rubella HOM05D004717 ORTHO05D005636 1.5e-108 396.4 223 87.0
CARHR190220 Cardamine hirsuta HOM05D004717 ORTHO05D005636 9.7e-108 393.7 224 87.1
THA.LOC104800704 Tarenaya hassleriana HOM05D004717 ORTHO05D005636 3.6e-94 348.6 223 77.1
AL6G18770 Arabidopsis lyrata HOM05D004717 ORTHO05D005636 5.0e-88 328.2 197 81.2
AT5G08335 Arabidopsis thaliana HOM05D004717 ORTHO05D005636 1.1e-87 327.0 197 80.2
Aa31LG3G18230 Aethionema arabicum HOM05D006471 ORTHO05D005636 1.5e-87 326.6 195 81.0
CARHR204740 Cardamine hirsuta HOM05D004717 ORTHO05D005636 1.2e-86 323.6 197 79.7
Carub.0006s0723 Capsella rubella HOM05D004717 ORTHO05D005636 2.7e-86 322.4 197 79.7
Thhalv10014725m.g Eutrema salsugineum HOM05D004717 ORTHO05D005636 8.0e-86 320.9 197 78.2
BraA03t09724Z Brassica rapa HOM05D004717 ORTHO05D005636 1.4e-85 320.1 197 78.2
C03p04250 Brassica napus HOM05D004717 ORTHO05D005636 5.2e-85 318.2 199 77.4
BolC3t12957H Brassica oleracea HOM05D004717 ORTHO05D005636 1.5e-84 316.6 197 77.7
QL04p036080 Quercus lobata HOM05D004717 ORTHO05D005636 1.5e-84 316.6 221 70.1
CiPaw.06G062200 Carya illinoinensis HOM05D004717 ORTHO05D005636 2.0e-84 316.2 223 69.1
A03p03770 Brassica napus HOM05D004717 ORTHO05D005636 2.6e-84 315.8 196 76.5
BcaB01g05612 Brassica carinata HOM05D004717 ORTHO05D005636 2.2e-83 312.8 197 78.2
Manes.08G039100 Manihot esculenta HOM05D004717 ORTHO05D005636 5.9e-81 304.7 223 65.5
QL04p036464 Quercus lobata HOM05D004717 ORTHO05D005636 7.7e-81 304.3 196 74.0
Dinv02673 Davidia involucrata HOM05D004717 ORTHO05D005636 1.0e-80 303.9 223 68.6
CiPaw.05G171400 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.3e-80 303.5 197 71.6
Eucgr.G02601 Eucalyptus grandis HOM05D004717 ORTHO05D005636 1.7e-80 303.1 203 71.9
Sed0025396 Sechium edule HOM05D004717 ORTHO05D005636 1.7e-80 303.1 223 66.4
Haze_11783 Corylus avellana HOM05D004717 ORTHO05D005636 2.9e-80 302.4 230 64.8
Gorai.008G146900 Gossypium raimondii HOM05D004717 ORTHO05D005636 6.5e-80 301.2 223 65.0
CiPaw.05G171500 Carya illinoinensis HOM05D004717 ORTHO05D005636 1.5e-79 300.1 197 71.6
Duzib132G0983 Durio zibethinus HOM05D004717 ORTHO05D005636 1.9e-79 299.7 201 71.1
Prupe.1G348900 Prunus persica HOM05D004717 ORTHO05D005636 1.9e-79 299.7 195 72.3
GSVIVG01038782001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.9e-79 299.7 223 65.9
Atru.chr11.1095 Acer truncatum HOM05D004717 ORTHO05D005636 2.5e-79 299.3 222 68.5
TWI74G1267 Tripterygium wilfordii HOM05D004717 ORTHO05D005636 2.5e-79 299.3 200 70.5
MD16G1003900 Malus domestica HOM05D004717 ORTHO05D005636 4.2e-79 298.5 197 71.6
CsaV3_6G005870 Cucumis sativus L. HOM05D004717 ORTHO05D005636 7.2e-79 297.7 223 67.3
Peaxi162Scf00681g00024 Petunia axillaris HOM05D004717 ORTHO05D005636 7.2e-79 297.7 223 64.6
MD13G1003500 Malus domestica HOM05D004717 ORTHO05D005636 1.2e-78 297.0 205 70.7
CAN.G274.13 Capsicum annuum HOM05D004717 ORTHO05D005636 1.6e-78 296.6 223 64.1
Thecc.02G155400 Theobroma cacao HOM05D004717 ORTHO05D005636 2.1e-78 296.2 213 67.1
Sabra07G0063200 Salix brachista HOM05D004717 ORTHO05D005636 2.7e-78 295.8 224 63.8
vmacro15638 Vaccinium macrocarpon HOM05D004717 ORTHO05D005636 2.7e-78 295.8 223 64.1
Nitab4.5_0004808g0010 Nicotiana tabacum HOM05D004717 ORTHO05D005636 3.6e-78 295.4 221 63.3
Gohir.A12G132100 Gossypium hirsutum HOM05D004717 ORTHO05D005636 4.7e-78 295.0 197 69.5
Lalb_Chr24g0398391 Lupinus albus HOM05D004717 ORTHO05D005636 4.7e-78 295.0 213 67.1
Nitab4.5_0004979g0110 Nicotiana tabacum HOM05D004717 ORTHO05D005636 8.0e-78 294.3 223 62.3
GSVIVG01026135001 Vitis vinifera HOM05D004717 ORTHO05D005636 1.4e-77 293.5 197 69.0
RcHm_v2.0_Chr4g0446911 Rosa chinensis HOM05D004717 ORTHO05D005636 1.8e-77 293.1 206 68.4
Oeu003437.1 Olea europaea HOM05D004717 ORTHO05D005636 4.0e-77 292.0 197 70.1
Ciclev10016775m.g Citrus clementina HOM05D004717 ORTHO05D005636 5.2e-77 291.6 197 70.1
Potri.007G074500 Populus trichocarpa HOM05D004717 ORTHO05D005636 5.2e-77 291.6 197 69.5
MELO3C022525.2 Cucumis melo HOM05D004717 ORTHO05D005636 1.2e-76 290.4 197 71.1
FAN12G1282 Fragaria x ananassa HOM05D004717 ORTHO05D005636 1.2e-76 290.4 243 60.5
TPR.G28016 Trifolium pratense HOM05D004717 ORTHO05D005636 1.2e-76 290.4 197 68.5
Lj6P708T54 Lonicera japonica HOM05D004717 ORTHO05D005636 2.0e-76 289.7 197 70.1
PGR142G2311 Punica granatum HOM05D004717 ORTHO05D005636 2.0e-76 289.7 199 70.9
Potri.005G089500 Populus trichocarpa HOM05D004717 ORTHO05D005636 2.6e-76 289.3 197 70.6
ClCG06G000120 Citrullus lanatus HOM05D004717 ORTHO05D005636 3.4e-76 288.9 188 71.3
Sp6g34610 Schrenkiella parvula HOM05D004717 ORTHO05D005636 4.4e-76 288.5 177 78.0
CSS0046676 Camellia sinensis var. sinensis HOM05D004717 ORTHO05D005636 5.7e-76 288.1 197 69.0
HanXRQChr08g0237151 Helianthus annuus HOM05D004717 ORTHO05D005636 9.8e-76 287.3 199 70.4
PGSC0003DMG400011510 Solanum tuberosum HOM05D004717 ORTHO05D005636 3.7e-75 285.4 197 67.0
Oeu033041.1 Olea europaea HOM05D004717 ORTHO05D005636 4.9e-75 285.0 197 67.0
Sed0013821 Sechium edule HOM05D004717 ORTHO05D005636 4.9e-75 285.0 197 69.0
Medtr6g075160 Medicago truncatula HOM05D004717 ORTHO05D005636 8.3e-75 284.3 197 67.0
Solyc04g009010.2 Solanum lycopersicum HOM05D004717 ORTHO05D005636 8.3e-75 284.3 197 66.5
Lj5g0015714 Lotus japonicus HOM05D004717 ORTHO05D005636 1.1e-74 283.9 197 67.5
DCAR_027608 Daucus carota HOM05D004717 ORTHO05D005636 1.8e-74 283.1 183 72.1
Glyma.16G218800 Glycine max HOM05D004717 ORTHO05D005636 1.8e-74 283.1 197 68.0
Thecc.05G241200 Theobroma cacao HOM05D004717 ORTHO05D005636 1.8e-74 283.1 186 72.6
PGR142G4258 Punica granatum HOM05D004717 ORTHO05D005636 4.1e-74 282.0 196 69.4
arahy.Tifrunner.gnm1.ann1.TS1LPS Arachis hypogaea HOM05D004717 ORTHO05D005636 7.0e-74 281.2 218 64.2
Eucgr.G02666 Eucalyptus grandis HOM05D004717 ORTHO05D005636 7.0e-74 281.2 197 68.5
Hma1.2p1_0513F.1_g169470 Hydrangea macrophylla HOM05D004717 ORTHO05D005636 7.0e-74 281.2 198 71.7
Sc08g0003750 Simmondsia chinensis HOM05D004717 ORTHO05D005636 7.0e-74 281.2 197 68.5
Lsat_1_v5_gn_9_25720 Lactuca sativa HOM05D004717 ORTHO05D005636 9.2e-74 280.8 197 68.5
Lj6P714T12 Lonicera japonica HOM05D004717 ORTHO05D005636 9.2e-74 280.8 183 73.2
arahy.Tifrunner.gnm1.ann1.8YZR55 Arachis hypogaea HOM05D004717 ORTHO05D005636 1.2e-73 280.4 218 64.2
Gohir.A11G227800 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.6e-73 280.0 184 72.3
Lj2g0014996 Lotus japonicus HOM05D004717 ORTHO05D005636 2.0e-73 279.6 197 66.0
Rhsim02G0075200 Rhododendron simsii HOM05D004717 ORTHO05D005636 2.0e-73 279.6 197 67.5
AUR62001133 Chenopodium quinoa HOM05D004717 ORTHO05D005636 2.7e-73 279.3 196 67.3
Psat1g123480 Pisum sativum HOM05D004717 ORTHO05D005636 2.7e-73 279.3 197 66.5
Ah.01g024100 Amaranthus hybridus HOM05D004717 ORTHO05D005636 3.5e-73 278.9 197 66.0
TPR.G9035 Trifolium pratense HOM05D004717 ORTHO05D005636 3.5e-73 278.9 197 66.5
SGA_v2.0_scaffold62G21625 Striga asiatica HOM05D004717 ORTHO05D005636 4.5e-73 278.5 197 67.5
Gohir.D12G135700 Gossypium hirsutum HOM05D004717 ORTHO05D005636 7.7e-73 277.7 183 69.4
MSTRG.7889 Avicennia marina HOM05D004717 ORTHO05D005636 1.0e-72 277.3 197 67.5
Gohir.D11G240300 Gossypium hirsutum HOM05D004717 ORTHO05D005636 1.0e-72 277.3 184 71.7
Gorai.007G253700 Gossypium raimondii HOM05D004717 ORTHO05D005636 1.0e-72 277.3 184 71.7
Lj3g0022258 Lotus japonicus HOM05D004717 ORTHO05D005636 1.3e-72 276.9 197 66.0
Cc11_g03470 Coffea canephora HOM05D004717 ORTHO05D005636 3.8e-72 275.4 197 65.5
ECA247G4036 Erigeron canadensis HOM05D004717 ORTHO05D005636 3.8e-72 275.4 196 66.8
EL10Ac7g17906 Beta vulgaris HOM05D004717 ORTHO05D005636 5.0e-72 275.0 191 67.5
Duzib177G0848 Durio zibethinus HOM05D004717 ORTHO05D005636 5.0e-72 275.0 186 71.0
Duzib106G0072 Durio zibethinus HOM05D004717 ORTHO05D005636 8.6e-72 274.2 186 69.9
CANSAT11G2572 Cannabis sativa HOM05D004717 ORTHO05D005636 1.5e-71 273.5 198 65.7
VMungo0464G0417 Vigna mungo HOM05D004717 ORTHO05D005636 1.5e-71 273.5 197 64.0
SGA_v2.0_scaffold8G04231 Striga asiatica HOM05D004717 ORTHO05D005636 1.9e-71 273.1 197 66.0
Nn2g12497 Nelumbo nucifera HOM05D004717 ORTHO05D005636 3.3e-71 272.3 193 65.3
AUR62012906 Chenopodium quinoa HOM05D004717 ORTHO05D005636 4.3e-71 271.9 197 65.5
Migut.L01402 Erythranthe guttata HOM05D004717 ORTHO05D005636 4.3e-71 271.9 197 66.5
Phvul.004G144800 Phaseolus vulgaris HOM05D004717 ORTHO05D005636 4.3e-71 271.9 197 64.5
PSO782G0831 Papaver somniferum HOM05D004717 ORTHO05D005636 7.3e-71 271.2 193 66.3
EL10Ac9g21225 Beta vulgaris HOM05D004717 ORTHO05D005636 4.7e-70 268.5 197 64.5
Sc17g0002110 Simmondsia chinensis HOM05D004717 ORTHO05D005636 2.3e-69 266.2 195 67.2
CDE02G0493 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 8.9e-69 264.2 196 60.7
Aa31LG11G2780 Aethionema arabicum HOM05D004717 ORTHO05D005636 2.6e-68 262.7 144 85.4
Ah.08g214600 Amaranthus hybridus HOM05D004717 ORTHO05D005636 3.4e-68 262.3 194 66.5
Lalb_Chr16g0386851 Lupinus albus HOM05D004717 ORTHO05D005636 9.8e-68 260.8 196 64.8
GSVIVG01038778001 Vitis vinifera HOM05D004717 ORTHO05D005636 2.9e-67 259.2 197 61.9
Aqoxy6G00094 Aquilegia oxysepala HOM05D004717 ORTHO05D005636 4.9e-67 258.5 194 61.9
MBI14_g08135_MAGBIO Magnolia biondii HOM05D004717 ORTHO05D005636 3.2e-66 255.8 198 61.1
SHI07248 Sapria himalayana HOM05D004717 ORTHO05D005636 5.4e-66 255.0 196 63.3
HPP92_018371 Vanilla planifolia HOM05D004717 ORTHO05D005636 1.6e-65 253.4 187 63.1
Migut.E00157 Erythranthe guttata HOM05D004717 ORTHO05D005636 2.7e-65 252.7 195 62.1
Lsat_1_v5_gn_5_170960 Lactuca sativa HOM05D004717 ORTHO05D005636 5.9e-65 251.5 197 59.9
unitig_8.g3169 Utricularia gibba HOM05D004717 ORTHO05D005636 3.0e-64 249.2 197 58.9
HanXRQChr01g0011051 Helianthus annuus HOM05D004717 ORTHO05D005636 9.5e-63 244.2 196 61.2
Lj3P847T27 Lonicera japonica HOM05D004717 ORTHO05D005636 3.6e-62 242.3 180 65.6
Cpa.g.sc59.26 Carica papaya HOM05D004717 ORTHO05D005636 1.4e-61 240.4 206 58.3
PSO170G2864 Papaver somniferum HOM05D004717 ORTHO05D005636 5.2e-61 238.4 164 68.3
DCAR_023472 Daucus carota HOM05D004717 ORTHO05D005636 1.1e-58 230.7 144 72.9
Actinidia35903 Actinidia chinensis HOM05D004717 ORTHO05D005636 1.0e-56 224.2 183 58.5
CDE04G3142 Ceratophyllum demersum HOM05D004717 ORTHO05D005636 1.7e-56 223.4 174 58.6
HanXRQChr17g0556721 Helianthus annuus HOM05D004717 ORTHO05D005636 5.2e-53 211.8 155 66.5
Zm00001eb144100 Zea mays HOM05D004717 ORTHO05D005636 5.2e-53 211.8 159 62.3
AUR62011721 Chenopodium quinoa HOM05D004717 ORTHO05D005636 5.8e-52 208.4 142 66.2
SMO117G0139 Selaginella moellendorffii HOM05D004717 ORTHO05D005636 2.9e-51 206.1 189 51.3
Rhsim02G0074800 Rhododendron simsii HOM05D004717 ORTHO05D005636 3.7e-51 205.7 223 50.7
Pp3c3_35430 Physcomitrium patens HOM05D004717 ORTHO05D005636 2.4e-50 203.0 187 53.5
ATR0580G192 Amborella trichopoda HOM05D004717 ORTHO05D005636 3.5e-49 199.1 144 60.4
Mapoly0062s0094 Marchantia polymorpha HOM05D004717 ORTHO05D005636 2.5e-47 193.0 187 50.3
Sopen04g004190 Solanum pennellii HOM05D004717 ORTHO05D005636 1.9e-42 176.8 114 68.4
TAR381G0283 Trochodendron aralioides HOM05D004717 ORTHO05D005636 2.3e-40 169.9 124 62.9
SalBow2G2042 Salvia bowleyana HOM05D004717 ORTHO05D005636 2.8e-38 162.9 197 47.2
Glyma.09G169200 Glycine max HOM05D004717 ORTHO05D005636 8.1e-38 161.4 197 46.7
COL.COLO4_20086 Corchorus olitorius HOM05D004717 ORTHO05D005636 1.4e-37 160.6 98 72.4
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 3.2e-34 149.4 193 51.3
MCO05G386 Micromonas commoda HOM05D004717 ORTHO05D005636 4.2e-34 149.1 188 43.1
PRCOL_00002165 Prasinoderma coloniale HOM05D004717 ORTHO05D005636 3.0e-32 142.9 183 46.4
Haze_27496 Corylus avellana HOM05D004717 ORTHO05D005636 4.3e-31 139.0 177 41.2
Ca_23673_v3 Cicer arietinum L. HOM05D004717 ORTHO05D005636 1.9e-23 113.6 134 43.3
Cfa021666 Carpinus fangiana HOM05D004717 ORTHO05D005636 5.6e-23 112.1 185 35.1
Hund05579 Selenicereus undatus HOM05D004717 ORTHO05D005636 1.1e-21 107.8 117 45.3
SEGI_39005 Sequoiadendron giganteum HOM05D004717 ORTHO05D005636 3.1e-21 106.3 74 62.2
ECA247G3377 Erigeron canadensis HOM05D004717 ORTHO05D005636 4.5e-20 102.4 85 61.2
Os04g0602900 Oryza sativa ssp. japonica HOM05D004717 ORTHO05D005636 2.9e-19 99.8 71 60.6
AagrBONN_evm.TU.Sc2ySwM_344.2327 Anthoceros agrestis HOM05D004717 ORTHO05D005636 1.1e-18 97.8 113 46.0
AagrBONN_evm.TU.Sc2ySwM_117.4144 Anthoceros agrestis HOM05D004717 ORTHO05D005636 9.3e-18 94.7 115 46.1
Eucgr.D01405 Eucalyptus grandis HOM05D004717 ORTHO05D005636 1.1e-15 87.8 106 43.4
RhsimUnG0160700 Rhododendron simsii HOM05D004717 ORTHO05D005636 6.5e-11 72.0 58 62.1
Dinv05788 Davidia involucrata HOM05D004717 ORTHO05D005636 1.3e-08 64.3 61 62.3
Actinidia11311 Actinidia chinensis HOM05D004717 ORTHO05D005636 3.9e-08 62.8 45 68.9


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