Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G32940 Arabidopsis lyrata HOM05D005213 ORTHO05D006229 1.2e-113 413.7 293 100.0
AT5G21280 Arabidopsis thaliana HOM05D005213 ORTHO05D006229 9.1e-98 360.9 303 80.5
CARHR191550 Cardamine hirsuta HOM05D005213 ORTHO05D006229 4.3e-87 325.5 311 81.7
Carub.0006s1962 Capsella rubella HOM05D005213 ORTHO05D006229 1.6e-81 307.0 318 80.2
BNapus_Darmor_BZH_scaffold_38p00940 Brassica napus HOM05D005213 ORTHO05D006229 2.1e-78 296.6 300 71.0
BraA02t05631Z Brassica rapa HOM05D005213 ORTHO05D006229 2.1e-78 296.6 300 71.0
Thhalv10014216m.g Eutrema salsugineum HOM05D005213 ORTHO05D006229 1.4e-77 293.9 305 73.8
BcaB08g36461 Brassica carinata HOM05D005213 ORTHO05D006229 4.9e-75 285.4 295 69.2
A10p18740 Brassica napus HOM05D005213 ORTHO05D006229 2.1e-73 280.0 298 64.8
BraA10t43954Z Brassica rapa HOM05D005213 ORTHO05D006229 6.0e-73 278.5 298 64.4
BcaC04g19528 Brassica carinata HOM05D005213 ORTHO05D006229 1.5e-71 273.9 299 67.2
BcaC03g13850 Brassica carinata HOM05D005213 ORTHO05D006229 2.0e-68 263.5 251 67.3
BolC2t07127H Brassica oleracea HOM05D005213 ORTHO05D006229 2.0e-68 263.5 251 67.3
BolC9t58333H Brassica oleracea HOM05D005213 ORTHO05D006229 7.1e-66 255.0 288 65.6
C09p54690 Brassica napus HOM05D005213 ORTHO05D006229 2.7e-65 253.1 288 66.0
BcaB05g22758 Brassica carinata HOM05D005213 ORTHO05D006229 6.0e-65 251.9 244 67.6
BraA03t10361Z Brassica rapa HOM05D005213 ORTHO05D006229 2.3e-64 250.0 291 60.5
A03p10500 Brassica napus HOM05D005213 ORTHO05D006229 8.6e-64 248.1 290 64.5
C03p12080 Brassica napus HOM05D005213 ORTHO05D006229 1.5e-63 247.3 249 64.3
BcaC01g06616 Brassica carinata HOM05D005213 ORTHO05D006229 1.9e-63 246.9 249 64.3
BolC3t13679H Brassica oleracea HOM05D005213 ORTHO05D006229 1.9e-63 246.9 249 64.3
Sp6g23210 Schrenkiella parvula HOM05D005213 ORTHO05D006229 1.4e-61 240.7 297 62.3
BcaB01g04752 Brassica carinata HOM05D005213 ORTHO05D006229 4.3e-55 219.2 228 64.5
THA.LOC104810950 Tarenaya hassleriana HOM05D005213 ORTHO05D006229 8.1e-38 161.8 352 49.4
Aa31LG1G13440 Aethionema arabicum HOM05D005213 ORTHO05D006229 6.5e-35 152.1 238 51.3
Duzib168G1397 Durio zibethinus HOM05D005213 ORTHO05D006229 1.3e-27 127.9 321 34.9
TAR624G0676 Trochodendron aralioides HOM05D005213 ORTHO05D006229 1.2e-25 121.3 375 33.9
Potri.006G217900 Populus trichocarpa HOM05D005213 ORTHO05D006229 4.6e-25 119.4 416 30.3
TWI34G0479 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 7.9e-25 118.6 388 31.2
GSVIVG01035506001 Vitis vinifera HOM05D005213 ORTHO05D006229 7.9e-25 118.6 314 36.3
Cpa.g.sc82.19 Carica papaya HOM05D005213 ORTHO05D006229 1.0e-24 118.2 394 32.5
Prupe.1G401300 Prunus persica HOM05D005213 ORTHO05D006229 9.7e-23 111.7 409 31.3
Gorai.009G039700 Gossypium raimondii HOM05D005213 ORTHO05D006229 2.2e-22 110.5 423 29.8
Duzib187G1454 Durio zibethinus HOM05D005213 ORTHO05D006229 3.7e-22 109.8 398 32.2
Thecc.09G066400 Theobroma cacao HOM05D005213 ORTHO05D006229 3.7e-22 109.8 422 30.3
Manes.16G087800 Manihot esculenta HOM05D005213 ORTHO05D006229 1.1e-21 108.2 405 29.1
Eucgr.C00749 Eucalyptus grandis HOM05D005213 ORTHO05D006229 1.4e-21 107.8 412 30.6
Gohir.D05G039200 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.4e-21 107.8 419 29.4
Cfa017841 Carpinus fangiana HOM05D005213 ORTHO05D006229 3.1e-21 106.7 289 33.9
Ciclev10008490m.g Citrus clementina HOM05D005213 ORTHO05D006229 3.1e-21 106.7 386 32.4
DCAR_001248 Daucus carota HOM05D005213 ORTHO05D006229 5.3e-21 105.9 377 30.0
CiPaw.16G068600 Carya illinoinensis HOM05D005213 ORTHO05D006229 6.9e-21 105.5 407 30.0
COL.COLO4_21169 Corchorus olitorius HOM05D005213 ORTHO05D006229 9.0e-21 105.1 424 35.6
Oeu020105.1 Olea europaea HOM05D005213 ORTHO05D006229 9.0e-21 105.1 156 48.1
MBI19_g18107_MAGBIO Magnolia biondii HOM05D004195 ORTHO05D005309 1.5e-20 104.4 393 30.5
HanXRQChr08g0228011 Helianthus annuus HOM05D005213 ORTHO05D006229 2.0e-20 104.0 327 33.3
Nn8g38551 Nelumbo nucifera HOM05D005213 ORTHO05D006229 2.0e-20 104.0 409 30.1
Duzib150G1003 Durio zibethinus HOM05D005213 ORTHO05D006229 3.4e-20 103.2 343 30.3
Gorai.010G094100 Gossypium raimondii HOM05D005213 ORTHO05D006229 5.9e-20 102.4 360 30.6
Migut.A00332 Erythranthe guttata HOM05D005213 ORTHO05D006229 7.7e-20 102.1 388 30.2
Peaxi162Scf00922g00016 Petunia axillaris HOM05D005213 ORTHO05D006229 1.0e-19 101.7 381 32.0
Gohir.D06G080700 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.3e-19 101.3 360 30.3
Cc08_g07800 Coffea canephora HOM05D005213 ORTHO05D006229 2.2e-19 100.5 411 30.9
Haze_18367 Corylus avellana HOM05D005213 ORTHO05D006229 2.2e-19 100.5 325 34.5
MD15G1047100 Malus domestica HOM05D005213 ORTHO05D006229 8.5e-19 98.6 412 30.1
Gohir.A06G081000 Gossypium hirsutum HOM05D005213 ORTHO05D006229 1.1e-18 98.2 358 29.6
SalBow8G0306 Salvia bowleyana HOM05D005213 ORTHO05D006229 1.1e-18 98.2 314 41.1
CAN.G1059.3 Capsicum annuum HOM05D005213 ORTHO05D006229 1.4e-18 97.8 369 36.3
HanXRQChr03g0067421 Helianthus annuus HOM05D005213 ORTHO05D006229 1.4e-18 97.8 344 34.9
MD08G1046900 Malus domestica HOM05D005213 ORTHO05D006229 1.4e-18 97.8 420 29.3
Haze_13552 Corylus avellana HOM05D005213 ORTHO05D006229 1.9e-18 97.4 407 29.7
RcHm_v2.0_Chr6g0304741 Rosa chinensis HOM05D005213 ORTHO05D006229 3.2e-18 96.7 394 32.7
Manes.03G055700 Manihot esculenta HOM05D005213 ORTHO05D006229 7.2e-18 95.5 212 39.6
HanXRQChr10g0309951 Helianthus annuus HOM05D005213 ORTHO05D006229 9.4e-18 95.1 187 47.1
Aqoxy7G04081 Aquilegia oxysepala HOM05D005213 ORTHO05D006229 4.6e-17 92.8 395 30.6
Lj1g0011388 Lotus japonicus HOM05D005213 ORTHO05D006229 4.6e-17 92.8 217 36.4
Cfa023359 Carpinus fangiana HOM05D005213 ORTHO05D006229 6.1e-17 92.4 406 29.3
Psat5g033280 Pisum sativum HOM05D005213 ORTHO05D006229 6.1e-17 92.4 321 34.0
FAN15G1397 Fragaria x ananassa HOM05D005213 ORTHO05D006229 7.9e-17 92.0 408 34.3
TPR.G21422 Trifolium pratense HOM05D005213 ORTHO05D006229 7.9e-17 92.0 336 28.3
Sc10g0009530 Simmondsia chinensis HOM05D005213 ORTHO05D006229 1.0e-16 91.7 306 37.9
Hund02523 Selenicereus undatus HOM05D005213 ORTHO05D006229 1.8e-16 90.9 319 30.7
Medtr3g105580 Medicago truncatula HOM05D005213 ORTHO05D006229 2.3e-16 90.5 329 29.5
Dinv41845 Davidia involucrata HOM05D005213 ORTHO05D006229 3.0e-16 90.1 440 31.8
FvH4_2g37040 Fragaria vesca HOM05D005213 ORTHO05D006229 5.1e-16 89.4 411 32.4
FAN27G3126 Fragaria x ananassa HOM05D005213 ORTHO05D006229 6.7e-16 89.0 395 33.2
Nn6g35650 Nelumbo nucifera HOM05D005213 ORTHO05D006229 6.7e-16 89.0 386 31.1
FAN20G0215 Fragaria x ananassa HOM05D005213 ORTHO05D006229 8.8e-16 88.6 390 33.3
Phvul.009G084600 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 8.8e-16 88.6 218 34.9
TPR.G38861 Trifolium pratense HOM05D005213 ORTHO05D006229 8.8e-16 88.6 92 57.6
BraA03t10362Z Brassica rapa HOM05D005213 ORTHO05D006229 1.5e-15 87.8 47 95.7
Ca_15799_v3 Cicer arietinum L. HOM05D005213 ORTHO05D006229 3.3e-15 86.7 343 30.9
VMungo1309G2063 Vigna mungo HOM05D005213 ORTHO05D006229 3.3e-15 86.7 223 34.1
HanXRQChr09g0261901 Helianthus annuus HOM05D005213 ORTHO05D006229 4.3e-15 86.3 102 53.9
Sed0001538 Sechium edule HOM05D005213 ORTHO05D006229 9.7e-15 85.1 271 34.7
SGA_v2.0_scaffold22G09922 Striga asiatica HOM05D005213 ORTHO05D006229 9.7e-15 85.1 362 28.5
Lalb_Chr22g0349651 Lupinus albus HOM05D005213 ORTHO05D006229 2.8e-14 83.6 217 34.6
TWI32G0481 Tripterygium wilfordii HOM05D005213 ORTHO05D006229 2.8e-14 83.6 385 31.2
Glyma.06G058600 Glycine max HOM05D005213 ORTHO05D006229 3.7e-14 83.2 325 32.3
Lalb_Chr11g0063421 Lupinus albus HOM05D005213 ORTHO05D006229 6.3e-14 82.4 337 28.5
Atru.chr7.1814 Acer truncatum HOM05D005213 ORTHO05D006229 8.2e-14 82.0 106 59.4
Nitab4.5_0000508g0090 Nicotiana tabacum HOM05D005213 ORTHO05D006229 8.2e-14 82.0 216 37.0
Psat6g023400 Pisum sativum HOM05D005213 ORTHO05D006229 1.8e-13 80.9 88 55.7
AUR62032196 Chenopodium quinoa HOM05D005213 ORTHO05D006229 3.1e-13 80.1 110 49.1
AUR62036963 Chenopodium quinoa HOM05D005213 ORTHO05D006229 3.1e-13 80.1 109 49.5
ECA240G0440 Erigeron canadensis HOM05D005213 ORTHO05D006229 3.1e-13 80.1 388 34.0
vmacro08659 Vaccinium macrocarpon HOM05D005213 ORTHO05D006229 3.1e-13 80.1 50 88.0
CsaV3_6G031800 Cucumis sativus L. HOM05D005213 ORTHO05D006229 5.3e-13 79.3 316 33.9
Glyma.04G057900 Glycine max HOM05D005213 ORTHO05D006229 1.2e-12 78.2 160 39.4
HPP92_002168 Vanilla planifolia HOM05D006173 ORTHO05D007685 1.2e-12 78.2 131 45.8
EL10Ac5g11257 Beta vulgaris HOM05D005213 ORTHO05D006229 1.5e-12 77.8 198 36.9
CSS0041342 Camellia sinensis var. sinensis HOM05D005213 ORTHO05D006229 2.0e-12 77.4 54 77.8
MELO3C026560.2 Cucumis melo HOM05D005213 ORTHO05D006229 2.6e-12 77.0 43 90.7
Lj7P206T8 Lonicera japonica HOM05D005213 ORTHO05D006229 2.6e-12 77.0 150 42.7
Medtr1g014750 Medicago truncatula HOM05D005213 ORTHO05D006229 2.6e-12 77.0 216 32.9
Zm00001eb019450 Zea mays HOM05D005213 ORTHO05D006229 2.6e-12 77.0 113 64.6
CDE05G3316 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 3.4e-12 76.6 207 33.8
Oeu030214.1 Olea europaea HOM05D005213 ORTHO05D006229 3.4e-12 76.6 148 42.6
CANSAT25G2504 Cannabis sativa HOM05D005213 ORTHO05D006229 4.5e-12 76.3 114 61.4
Nitab4.5_0007212g0010 Nicotiana tabacum HOM05D005213 ORTHO05D006229 4.5e-12 76.3 218 40.4
ClCG08G009670 Citrullus lanatus HOM05D005213 ORTHO05D006229 5.9e-12 75.9 62 67.7
ECA234G4818 Erigeron canadensis HOM05D005213 ORTHO05D006229 5.9e-12 75.9 200 37.5
Actinidia27819 Actinidia chinensis HOM05D005213 ORTHO05D006229 7.7e-12 75.5 114 46.5
ATR0681G043 Amborella trichopoda HOM05D005213 ORTHO05D006229 1.7e-11 74.3 110 48.2
Rhsim04G0156600 Rhododendron simsii HOM05D005213 ORTHO05D006229 2.9e-11 73.6 353 27.2
CDE05G3450 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 5.0e-11 72.8 181 34.8
PSO386G0069 Papaver somniferum HOM05D005213 ORTHO05D006229 6.5e-11 72.4 112 47.3
ECA236G4272 Erigeron canadensis HOM05D005213 ORTHO05D006229 1.1e-10 71.6 253 43.9
PGR142G1942 Punica granatum HOM05D005213 ORTHO05D006229 2.5e-10 70.5 310 34.2
Migut.E01467 Erythranthe guttata HOM05D005213 ORTHO05D006229 9.4e-10 68.6 236 31.4
PSO223G0037 Papaver somniferum HOM05D005213 ORTHO05D006229 1.2e-09 68.2 198 36.4
unitig_747.g21889 Utricularia gibba HOM05D005213 ORTHO05D006229 2.1e-09 67.4 284 29.9
Hma1.2p1_0920F.1_g236590 Hydrangea macrophylla HOM05D005213 ORTHO05D006229 2.7e-09 67.0 128 42.2
CDE11G0900 Ceratophyllum demersum HOM05D005213 ORTHO05D006229 1.4e-08 64.7 194 31.4
Zm00001eb109280 Zea mays HOM05D005213 ORTHO05D006229 6.7e-08 62.4 42 83.3
Phvul.001G044300 Phaseolus vulgaris HOM05D005213 ORTHO05D006229 8.8e-08 62.0 96 44.8
unitig_32.g10930 Utricularia gibba HOM05D005213 ORTHO05D006229 2.0e-07 60.8 110 42.7
Oeu022129.1 Olea europaea HOM05D005213 ORTHO05D006229 7.4e-07 58.9 286 27.6
unitig_0.g2816 Utricularia gibba HOM05D005213 ORTHO05D006229 7.4e-07 58.9 140 36.4
Solyc08g067270.3 Solanum lycopersicum HOM05D005213 ORTHO05D006229 4.8e-06 56.2 197 31.0
HPP92_013274 Vanilla planifolia HOM05D005213 ORTHO05D006229 8.2e-06 55.5 40 67.5
VMungo0477G0001 Vigna mungo HOM05D005213 ORTHO05D006229 8.2e-06 55.5 42 71.4


User provided reference genes

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