Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 1.0e-215 753.1 365 100.0
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 1.8e-204 715.7 365 95.1
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 2.3e-199 698.7 365 93.2
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 4.8e-197 691.0 368 89.9
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 9.7e-190 666.8 366 89.9
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 5.3e-188 661.0 366 88.5
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 9.1e-188 660.2 366 89.1
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 1.9e-185 652.5 365 87.1
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 1.9e-185 652.5 365 87.4
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 1.9e-185 652.5 365 87.1
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 2.5e-185 652.1 365 87.4
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 4.6e-147 525.0 355 74.1
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 1.1e-119 434.1 241 88.8
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 1.0e-98 364.4 372 50.5
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 2.5e-97 359.8 369 50.1
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 3.3e-97 359.4 368 51.6
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 1.3e-96 357.5 370 50.8
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 2.0e-94 350.1 369 50.1
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 4.8e-88 328.9 374 47.9
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 8.2e-88 328.2 371 46.1
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 1.1e-87 327.8 367 47.4
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 1.8e-87 327.0 367 47.4
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.8e-87 327.0 366 45.1
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 2.4e-87 326.6 366 48.4
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 3.1e-87 326.2 367 47.4
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 4.1e-87 325.9 366 47.3
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 5.3e-87 325.5 368 46.7
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 2.0e-86 323.6 370 45.4
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 3.4e-86 322.8 372 46.5
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 3.4e-86 322.8 368 47.3
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 2.2e-85 320.1 367 46.0
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 3.8e-85 319.3 377 45.1
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 8.5e-85 318.2 367 46.0
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 5.5e-84 315.5 371 46.4
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 1.6e-83 313.9 372 45.4
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 2.1e-83 313.5 362 45.9
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 4.6e-83 312.4 373 44.2
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 1.4e-82 310.8 368 45.9
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 1.8e-82 310.5 365 46.6
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 6.7e-82 308.5 373 44.2
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 6.7e-82 308.5 367 45.0
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 8.8e-82 308.1 365 45.8
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 1.5e-81 307.4 372 43.3
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 1.5e-81 307.4 375 43.5
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 4.3e-81 305.8 373 43.4
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 5.7e-81 305.4 375 43.2
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 9.7e-81 304.7 369 43.6
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 1.7e-80 303.9 367 42.8
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 2.2e-80 303.5 363 44.6
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 2.8e-80 303.1 327 47.7
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 1.1e-79 301.2 362 44.2
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 4.1e-79 299.3 369 44.4
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 2.6e-78 296.6 327 47.1
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 4.5e-78 295.8 366 41.8
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 7.7e-78 295.0 361 43.2
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 1.7e-77 293.9 364 43.7
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 8.5e-77 291.6 375 42.4
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 5.5e-76 288.9 371 43.1
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 2.1e-75 287.0 365 42.5
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 3.3e-73 279.6 151 89.4
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 2.4e-71 273.5 329 43.2
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 4.1e-71 272.7 327 45.9
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 2.2e-69 266.9 366 39.9
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 6.5e-69 265.4 326 43.6
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 4.2e-68 262.7 299 44.8
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 2.3e-58 230.3 303 43.2
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 4.4e-57 226.1 339 38.9
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 1.4e-55 221.1 349 36.4
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 5.4e-55 219.2 351 35.9
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 3.4e-49 199.9 281 40.9
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 7.5e-49 198.7 360 35.3
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 1.5e-36 157.9 206 39.8


User provided reference genes

Program Settings