Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G26910 Arabidopsis lyrata HOM05D004418 ORTHO05D005222 1.3e-175 619.8 339 100.0
AT5G16030 Arabidopsis thaliana HOM05D004418 ORTHO05D005222 1.5e-136 490.0 342 85.4
Thhalv10014096m.g Eutrema salsugineum HOM05D004418 ORTHO05D005222 6.3e-135 484.6 339 84.7
BolC9t58946H Brassica oleracea HOM05D004418 ORTHO05D005222 4.1e-134 481.9 352 77.6
C09p60990 Brassica napus HOM05D004418 ORTHO05D005222 2.0e-133 479.6 352 77.3
A10p23020 Brassica napus HOM05D004418 ORTHO05D005222 7.8e-133 477.6 365 76.7
BraA10t44371Z Brassica rapa HOM05D004418 ORTHO05D005222 7.8e-133 477.6 365 76.7
BcaC04g18914 Brassica carinata HOM05D004418 ORTHO05D005222 1.6e-130 469.9 354 75.4
A03p07540 Brassica napus HOM05D004418 ORTHO05D005222 2.8e-130 469.2 342 80.1
Carub.0006s1422 Capsella rubella HOM05D004418 ORTHO05D005222 3.6e-130 468.8 341 82.7
C03p08770 Brassica napus HOM05D004418 ORTHO05D005222 4.7e-130 468.4 341 80.6
BraA03t10082Z Brassica rapa HOM05D004418 ORTHO05D005222 3.0e-129 465.7 349 77.7
BolC3t13373H Brassica oleracea HOM05D004418 ORTHO05D005222 3.4e-128 462.2 348 79.0
CARHR197280 Cardamine hirsuta HOM05D004418 ORTHO05D005222 5.8e-128 461.5 343 80.8
Sp6g28100 Schrenkiella parvula HOM05D004418 ORTHO05D005222 2.0e-125 453.0 351 78.6
BcaB08g36881 Brassica carinata HOM05D004418 ORTHO05D005222 5.6e-123 444.9 355 75.8
BcaC03g18465 Brassica carinata HOM05D004418 ORTHO05D005222 4.7e-122 441.8 347 74.9
A02p03360 Brassica napus HOM05D004418 ORTHO05D005222 4.7e-122 441.8 348 76.1
C02p08130 Brassica napus HOM05D004418 ORTHO05D005222 4.7e-122 441.8 347 74.9
BraA02t05307Z Brassica rapa HOM05D004418 ORTHO05D005222 1.2e-120 437.2 349 75.9
BcaNung02220 Brassica carinata HOM05D004418 ORTHO05D005222 6.4e-119 431.4 349 75.1
BolC2t06735H Brassica oleracea HOM05D004418 ORTHO05D005222 1.7e-116 423.3 363 71.1
BcaB01g05008 Brassica carinata HOM05D004418 ORTHO05D005222 3.4e-112 409.1 253 85.4
Aa31LG11G13580 Aethionema arabicum HOM05D004418 ORTHO05D005222 1.5e-99 367.1 345 71.0
THA.LOC104803001 Tarenaya hassleriana HOM05D004418 ORTHO05D005222 1.9e-83 313.5 334 66.2
Aa31LG5G13000 Aethionema arabicum HOM05D004418 ORTHO05D005222 5.1e-76 288.9 251 65.3
AL3G11860 Arabidopsis lyrata HOM05D004418 ORTHO05D005222 7.4e-75 285.0 341 54.8
AT3G02500 Arabidopsis thaliana HOM05D004418 ORTHO05D005222 7.4e-75 285.0 338 55.9
CARHR076500 Cardamine hirsuta HOM05D004418 ORTHO05D005222 1.1e-65 254.6 262 61.8
Carub.0003s0161 Capsella rubella HOM05D004418 ORTHO05D005222 1.2e-64 251.1 341 51.6
ClCG11G005360 Citrullus lanatus HOM05D004418 ORTHO05D005222 7.4e-59 231.9 343 50.4
Thecc.04G137500 Theobroma cacao HOM05D004418 ORTHO05D005222 9.7e-59 231.5 340 50.9
COL.COLO4_16191 Corchorus olitorius HOM05D004418 ORTHO05D005222 1.3e-58 231.1 252 60.7
BraA03t12466Z Brassica rapa HOM05D004418 ORTHO05D005222 2.8e-58 229.9 332 48.2
A03p32980 Brassica napus HOM05D004418 ORTHO05D005222 3.7e-58 229.6 332 49.1
BolC3t16277H Brassica oleracea HOM05D004418 ORTHO05D005222 3.7e-58 229.6 332 49.4
C03p40110 Brassica napus HOM05D004418 ORTHO05D005222 4.8e-58 229.2 332 49.4
Manes.01G108300 Manihot esculenta HOM05D004418 ORTHO05D005222 4.1e-57 226.1 239 60.3
Gohir.A07G071400 Gossypium hirsutum HOM05D004418 ORTHO05D005222 5.3e-57 225.7 323 49.8
Gohir.D07G075900 Gossypium hirsutum HOM05D004418 ORTHO05D005222 1.2e-56 224.6 251 57.8
Prupe.3G239700 Prunus persica HOM05D004418 ORTHO05D005222 1.2e-56 224.6 341 51.3
CiPaw.03G059700 Carya illinoinensis HOM05D004418 ORTHO05D005222 2.6e-56 223.4 343 49.6
BcaC01g04442 Brassica carinata HOM05D004418 ORTHO05D005222 3.4e-56 223.0 253 57.7
Gorai.001G080100 Gossypium raimondii HOM05D004418 ORTHO05D005222 4.5e-56 222.6 251 57.4
Cpa.g.sc179.25 Carica papaya HOM05D004418 ORTHO05D005222 1.7e-55 220.7 346 50.3
Nitab4.5_0004118g0100 Nicotiana tabacum HOM05D004418 ORTHO05D005222 2.2e-55 220.3 313 50.2
Duzib133G1448 Durio zibethinus HOM05D004418 ORTHO05D005222 6.5e-55 218.8 273 55.3
CiPaw.04G040400 Carya illinoinensis HOM05D004418 ORTHO05D005222 8.5e-55 218.4 337 47.8
Nitab4.5_0008781g0030 Nicotiana tabacum HOM05D004418 ORTHO05D005222 8.5e-55 218.4 322 49.4
CsaV3_5G039140 Cucumis sativus L. HOM05D004418 ORTHO05D005222 4.2e-54 216.1 343 48.1
MD17G1074300 Malus domestica HOM05D004418 ORTHO05D005222 4.2e-54 216.1 335 48.7
Sed0007454 Sechium edule HOM05D004418 ORTHO05D005222 7.2e-54 215.3 340 48.5
Ciclev10012140m.g Citrus clementina HOM05D004418 ORTHO05D005222 1.2e-53 214.5 352 54.0
Sabra04G0078200 Salix brachista HOM05D004418 ORTHO05D005222 1.2e-53 214.5 328 49.7
Cc07_g09010 Coffea canephora HOM05D004418 ORTHO05D005222 3.6e-53 213.0 279 55.2
GSVIVG01036443001 Vitis vinifera HOM05D004418 ORTHO05D005222 4.7e-53 212.6 253 58.1
Oeu030758.1 Olea europaea HOM05D004418 ORTHO05D005222 6.1e-53 212.2 246 58.5
RcHm_v2.0_Chr2g0163131 Rosa chinensis HOM05D004418 ORTHO05D005222 6.1e-53 212.2 237 58.6
Potri.017G112600 Populus trichocarpa HOM05D004418 ORTHO05D005222 7.9e-53 211.8 327 47.7
Haze_14129 Corylus avellana HOM05D004418 ORTHO05D005222 1.0e-52 211.5 255 57.3
Dinv34848 Davidia involucrata HOM05D004418 ORTHO05D005222 1.4e-52 211.1 260 56.9
MD09G1084800 Malus domestica HOM05D004418 ORTHO05D005222 1.8e-52 210.7 341 48.4
Cfa007945 Carpinus fangiana HOM05D004418 ORTHO05D005222 2.3e-52 210.3 327 49.2
FvH4_6g45350 Fragaria vesca HOM05D004418 ORTHO05D005222 3.0e-52 209.9 237 57.4
FAN14G2637 Fragaria x ananassa HOM05D004418 ORTHO05D005222 3.0e-52 209.9 237 57.4
FAN02G0751 Fragaria x ananassa HOM05D004418 ORTHO05D005222 5.1e-52 209.1 237 57.4
Lj2C447G3 Lonicera japonica HOM05D006042 ORTHO05D007658 5.1e-52 209.1 240 57.9
FAN05G3990 Fragaria x ananassa HOM05D004418 ORTHO05D005222 6.7e-52 208.8 237 57.0
QL02p052558 Quercus lobata HOM05D004418 ORTHO05D005222 8.8e-52 208.4 242 58.3
arahy.Tifrunner.gnm1.ann1.FZV4HQ Arachis hypogaea HOM05D004418 ORTHO05D005222 1.1e-51 208.0 329 48.3
arahy.Tifrunner.gnm1.ann1.I4UW8B Arachis hypogaea HOM05D004418 ORTHO05D005222 1.1e-51 208.0 329 48.3
Medtr7g018370 Medicago truncatula HOM05D004418 ORTHO05D005222 1.1e-51 208.0 236 58.1
Actinidia15868 Actinidia chinensis HOM05D004418 ORTHO05D005222 1.5e-51 207.6 242 57.0
CANSAT64G2567 Cannabis sativa HOM05D004418 ORTHO05D005222 1.5e-51 207.6 231 57.1
Lj1g0022779 Lotus japonicus HOM05D004418 ORTHO05D005222 2.0e-51 207.2 274 54.4
TAR462G0001 Trochodendron aralioides HOM05D004418 ORTHO05D005222 2.0e-51 207.2 250 56.4
Sopen02g030440 Solanum pennellii HOM05D004418 ORTHO05D005222 2.6e-51 206.8 355 47.9
BcaC01g04556 Brassica carinata HOM05D004418 ORTHO05D005222 4.4e-51 206.1 332 47.0
Eucgr.F02480 Eucalyptus grandis HOM05D004418 ORTHO05D005222 7.4e-51 205.3 327 47.4
Hma1.2p1_0550F.1_g177250 Hydrangea macrophylla HOM05D004418 ORTHO05D005222 7.4e-51 205.3 253 56.5
Gohir.D11G168666 Gossypium hirsutum HOM05D004418 ORTHO05D005222 1.3e-50 204.5 338 47.0
Potri.004G102200 Populus trichocarpa HOM05D004418 ORTHO05D005222 1.3e-50 204.5 327 46.5
Lalb_Chr06g0174671 Lupinus albus HOM05D004418 ORTHO05D005222 1.7e-50 204.1 339 45.1
Solyc02g085750.4 Solanum lycopersicum HOM05D004418 ORTHO05D005222 1.7e-50 204.1 278 54.3
Glyma.18G281000 Glycine max HOM05D004418 ORTHO05D005222 2.2e-50 203.8 324 47.2
Oeu052993.1 Olea europaea HOM05D004418 ORTHO05D005222 2.2e-50 203.8 230 58.7
CAN.G358.137 Capsicum annuum HOM05D004418 ORTHO05D005222 2.8e-50 203.4 239 56.9
Nn4g23746 Nelumbo nucifera HOM05D004418 ORTHO05D005222 6.3e-50 202.2 262 55.0
VMungo1383G2014 Vigna mungo HOM05D004418 ORTHO05D005222 8.2e-50 201.8 274 51.8
Dinv33929 Davidia involucrata HOM05D004418 ORTHO05D005222 3.1e-49 199.9 279 54.1
TPR.G4552 Trifolium pratense HOM05D004418 ORTHO05D005222 3.1e-49 199.9 327 47.7
Gohir.A11G162400 Gossypium hirsutum HOM05D004418 ORTHO05D005222 4.1e-49 199.5 340 46.8
CsaV3_3G020330 Cucumis sativus L. HOM05D004418 ORTHO05D005222 5.3e-49 199.1 340 44.1
VMungo0464G1669 Vigna mungo HOM05D004418 ORTHO05D005222 5.3e-49 199.1 331 45.0
ClCG05G012070 Citrullus lanatus HOM05D004418 ORTHO05D005222 7.0e-49 198.7 326 45.1
Gorai.007G180200 Gossypium raimondii HOM05D004418 ORTHO05D005222 7.0e-49 198.7 338 46.4
CSS0030087 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 2.6e-48 196.8 303 49.5
Glyma.08G256900 Glycine max HOM05D004418 ORTHO05D005222 2.6e-48 196.8 326 46.6
Psat3g190400 Pisum sativum HOM05D004418 ORTHO05D005222 2.6e-48 196.8 325 47.1
Atru.chr8.826 Acer truncatum HOM05D004418 ORTHO05D005222 4.5e-48 196.1 223 60.5
Phvul.004G062900 Phaseolus vulgaris HOM05D004418 ORTHO05D005222 4.5e-48 196.1 321 45.8
MELO3C023762.2 Cucumis melo HOM05D004418 ORTHO05D005222 5.9e-48 195.7 340 43.2
Ah.10g037550 Amaranthus hybridus HOM05D004418 ORTHO05D005222 7.7e-48 195.3 268 52.6
Actinidia36309 Actinidia chinensis HOM05D004418 ORTHO05D005222 1.7e-47 194.1 226 55.8
Nitab4.5_0000628g0180 Nicotiana tabacum HOM05D004418 ORTHO05D005222 2.2e-47 193.7 270 51.5
Sopen02g014090 Solanum pennellii HOM05D004418 ORTHO05D005222 2.2e-47 193.7 338 45.6
Nn3g17760 Nelumbo nucifera HOM05D004418 ORTHO05D005222 1.1e-46 191.4 331 46.2
MSTRG.23562 Avicennia marina HOM05D004418 ORTHO05D005222 3.2e-46 189.9 242 54.5
HanXRQChr12g0376561 Helianthus annuus HOM05D004418 ORTHO05D005222 3.2e-46 189.9 273 48.4
Solyc02g063030.4 Solanum lycopersicum HOM05D004418 ORTHO05D005222 3.2e-46 189.9 338 45.0
ECA246G2173 Erigeron canadensis HOM05D004418 ORTHO05D005222 4.2e-46 189.5 276 50.0
Glyma.19G045400 Glycine max HOM05D004418 ORTHO05D005222 4.2e-46 189.5 333 43.5
CSS0000095 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 5.5e-46 189.1 267 51.3
Glyma.13G046900 Glycine max HOM05D004418 ORTHO05D005222 5.5e-46 189.1 330 44.5
PGSC0003DMG400024185 Solanum tuberosum HOM05D004418 ORTHO05D005222 7.2e-46 188.7 341 45.5
Sabra17G0093300 Salix brachista HOM05D004418 ORTHO05D005222 2.1e-45 187.2 260 52.3
EL10Ac2g04606 Beta vulgaris HOM05D004418 ORTHO05D005222 3.6e-45 186.4 270 50.7
Peaxi162Scf01327g00136 Petunia axillaris HOM05D004418 ORTHO05D005222 8.0e-45 185.3 279 48.7
Psat1g012960 Pisum sativum HOM05D004418 ORTHO05D005222 1.8e-44 184.1 238 51.7
CSS0011812 Camellia sinensis var. sinensis HOM05D004418 ORTHO05D005222 3.0e-44 183.3 265 52.8
DCAR_017217 Daucus carota HOM05D004418 ORTHO05D005222 3.0e-44 183.3 336 45.2
Sed0007873 Sechium edule HOM05D004418 ORTHO05D005222 3.0e-44 183.3 345 41.4
Phvul.008G020100 Phaseolus vulgaris HOM05D004418 ORTHO05D005222 5.2e-44 182.6 274 48.5
TAR278G0004 Trochodendron aralioides HOM05D004418 ORTHO05D005222 5.2e-44 182.6 250 51.6
MELO3C022089.2 Cucumis melo HOM05D004418 ORTHO05D005222 2.0e-43 180.6 178 62.4
TPR.G32452 Trifolium pratense HOM05D004418 ORTHO05D005222 2.0e-43 180.6 327 44.0
Medtr6g017240 Medicago truncatula HOM05D004418 ORTHO05D005222 2.6e-43 180.3 328 42.7
Nitab4.5_0007207g0030 Nicotiana tabacum HOM05D004418 ORTHO05D005222 2.6e-43 180.3 262 48.5
Lj2g0026691 Lotus japonicus HOM05D004418 ORTHO05D005222 6.3e-42 175.6 275 46.9
Lalb_Chr10g0092251 Lupinus albus HOM05D004418 ORTHO05D005222 6.3e-42 175.6 326 43.6
TWI75G1693 Tripterygium wilfordii HOM05D004418 ORTHO05D005222 8.2e-42 175.3 335 40.9
CAN.G23.16 Capsicum annuum HOM05D004418 ORTHO05D005222 1.4e-41 174.5 333 43.5
Aqoxy3G03921 Aquilegia oxysepala HOM05D004418 ORTHO05D005222 2.4e-41 173.7 371 40.7
Migut.L00303 Erythranthe guttata HOM05D004418 ORTHO05D005222 4.1e-41 172.9 252 50.0
PGR042G3608 Punica granatum HOM05D004418 ORTHO05D005222 2.0e-40 170.6 314 45.5
Hund13733 Selenicereus undatus HOM05D004418 ORTHO05D005222 5.9e-40 169.1 251 49.4
Aqoxy3G00366 Aquilegia oxysepala HOM05D004418 ORTHO05D005222 5.0e-39 166.0 276 44.9
PSO017G3409 Papaver somniferum HOM05D004418 ORTHO05D005222 1.5e-38 164.5 277 46.9
TWI79G1555 Tripterygium wilfordii HOM05D004418 ORTHO05D005222 9.4e-38 161.8 364 37.9
PSO478G2162 Papaver somniferum HOM05D004418 ORTHO05D005222 1.8e-36 157.5 280 45.4
SGA_v2.0_scaffold33G13429 Striga asiatica HOM05D004418 ORTHO05D005222 1.8e-36 157.5 274 43.4
Peaxi162Scf00501g00012 Petunia axillaris HOM05D004418 ORTHO05D005222 2.3e-36 157.1 335 40.9
Lsat_1_v5_gn_3_80201 Lactuca sativa HOM05D004418 ORTHO05D005222 1.3e-34 151.4 175 54.9
MSTRG.3576 Avicennia marina HOM05D004418 ORTHO05D005222 2.8e-34 150.2 269 45.0
Lj4A194T37 Lonicera japonica HOM05D004418 ORTHO05D005222 2.8e-34 150.2 245 49.8
PGR004G1179 Punica granatum HOM05D004418 ORTHO05D005222 5.3e-33 146.0 338 42.0
Migut.H00200 Erythranthe guttata HOM05D004418 ORTHO05D005222 4.5e-32 142.9 276 43.1
MBI09_g05206_MAGBIO Magnolia biondii HOM05D004418 ORTHO05D005222 2.9e-31 140.2 280 41.8
SalBow5G1629 Salvia bowleyana HOM05D004418 ORTHO05D005222 1.5e-30 137.9 216 50.0
Ah.16g101950 Amaranthus hybridus HOM05D004418 ORTHO05D005222 2.0e-27 127.5 147 53.7
arahy.Tifrunner.gnm1.ann1.SB4BUV Arachis hypogaea HOM05D004418 ORTHO05D005222 1.6e-24 117.9 307 35.2
vmacro05572 Vaccinium macrocarpon HOM05D004418 ORTHO05D005222 5.9e-24 115.9 274 38.3
Oeu052991.1 Olea europaea HOM05D004418 ORTHO05D005222 1.7e-23 114.4 106 64.2
SalBow3G2364 Salvia bowleyana HOM05D004418 ORTHO05D005222 1.5e-22 111.3 255 37.3
SalBow3G3548 Salvia bowleyana HOM05D004418 ORTHO05D005222 1.5e-22 111.3 255 37.3
RcHm_v2.0_Chr4g0404491 Rosa chinensis HOM05D004418 ORTHO05D005222 2.1e-21 107.5 110 60.0
arahy.Tifrunner.gnm1.ann1.554YPX Arachis hypogaea HOM05D004418 ORTHO05D005222 4.4e-19 99.8 168 43.5
ATR0686G091 Amborella trichopoda HOM05D004418 ORTHO05D005222 1.4e-17 94.7 164 42.7
Sc11g0008220 Simmondsia chinensis HOM05D004418 ORTHO05D005222 5.9e-16 89.4 116 51.7
SGA_v2.0_scaffold49G18089 Striga asiatica HOM05D004418 ORTHO05D005222 5.9e-16 89.4 209 34.9
unitig_32.g11894 Utricularia gibba HOM05D004418 ORTHO05D005222 4.7e-13 79.7 80 55.0
CAN.G144.13 Capsicum annuum HOM05D004418 ORTHO05D005222 3.4e-11 73.6 65 69.2


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