Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL6G17460 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 1.8e-44 182.2 92 100.0
AT5G07230 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 1.4e-39 166.0 92 92.4
CARHR205910 Cardamine hirsuta HOM05D005649 ORTHO05D006837 1.2e-35 152.9 91 84.6
Sp6g35660 Schrenkiella parvula HOM05D005649 ORTHO05D006837 5.9e-35 150.6 97 79.4
Thhalv10015126m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 2.2e-34 148.7 95 78.9
Carub.0006s0617 Capsella rubella HOM05D005649 ORTHO05D006837 1.9e-33 145.6 79 88.6
BcaC06g32460 Brassica carinata HOM05D005649 ORTHO05D006837 3.3e-30 134.8 81 76.5
A10p28990 Brassica napus HOM05D005649 ORTHO05D006837 9.7e-30 133.3 93 73.1
BraA10t44947Z Brassica rapa HOM05D005649 ORTHO05D006837 9.7e-30 133.3 93 73.1
C09p69350 Brassica napus HOM05D005649 ORTHO05D006837 3.7e-29 131.3 93 71.0
BolC9t59679H Brassica oleracea HOM05D005649 ORTHO05D006837 3.7e-29 131.3 93 71.0
Carub.0008s2276 Capsella rubella HOM05D005649 ORTHO05D006837 8.5e-26 120.2 97 67.0
CARHR275870 Cardamine hirsuta HOM05D005649 ORTHO05D006837 2.5e-25 118.6 97 67.0
AL8G38860 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 2.1e-24 115.5 95 65.3
Thhalv10005193m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 1.8e-23 112.5 97 61.9
Sp2g25250 Schrenkiella parvula HOM05D005649 ORTHO05D006837 2.3e-23 112.1 91 64.8
AT5G62080 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 5.2e-23 110.9 95 63.2
Aa31LG2G14300 Aethionema arabicum HOM05D005649 ORTHO05D006837 2.2e-21 105.5 87 56.3
TPR.G17428 Trifolium pratense HOM05D005649 ORTHO05D006837 2.5e-17 92.0 90 52.2
CiPaw.04G066700 Carya illinoinensis HOM05D005649 ORTHO05D006837 3.6e-16 88.2 92 48.9
Medtr1g101360 Medicago truncatula HOM05D005649 ORTHO05D006837 3.6e-16 88.2 90 52.2
Psat0s6119g0040 Pisum sativum HOM05D005649 ORTHO05D006837 8.0e-16 87.0 81 51.9
CiPaw.03G103300 Carya illinoinensis HOM05D005649 ORTHO05D006837 1.4e-15 86.3 93 45.2
Haze_13744 Corylus avellana HOM05D005649 ORTHO05D006837 3.0e-15 85.1 93 48.4
Sc13g0008480 Simmondsia chinensis HOM05D005649 ORTHO05D006837 5.2e-15 84.3 84 47.6
Ciclev10006307m.g Citrus clementina HOM05D005649 ORTHO05D006837 8.8e-15 83.6 89 46.1
Ca_10790_v3 Cicer arietinum L. HOM05D005649 ORTHO05D006837 2.0e-14 82.4 91 45.1
Hma1.2p1_1323F.1_g275520 Hydrangea macrophylla HOM05D005649 ORTHO05D006837 2.0e-14 82.4 95 46.3
Lalb_Chr01g0009161 Lupinus albus HOM05D005649 ORTHO05D006837 2.0e-14 82.4 93 48.4
Lalb_Chr19g0130991 Lupinus albus HOM05D005649 ORTHO05D006837 2.0e-14 82.4 91 48.4
Thecc.03G171600 Theobroma cacao HOM05D005649 ORTHO05D006837 2.6e-14 82.0 90 43.3
Duzib084G1193 Durio zibethinus HOM05D005649 ORTHO05D006837 3.4e-14 81.6 91 45.1
Oeu062770.1 Olea europaea HOM05D005649 ORTHO05D006837 5.7e-14 80.9 66 53.0
Atru.chr1.509 Acer truncatum HOM05D005649 ORTHO05D006837 7.5e-14 80.5 93 47.3
Aa31LG2G14310 Aethionema arabicum HOM05D005649 ORTHO05D006837 7.5e-14 80.5 84 52.4
Glyma.16G197100 Glycine max HOM05D005649 ORTHO05D006837 7.5e-14 80.5 86 46.5
TAR629G2474 Trochodendron aralioides HOM05D005649 ORTHO05D006837 7.5e-14 80.5 90 45.6
Potri.015G139100 Populus trichocarpa HOM05D005649 ORTHO05D006837 1.3e-13 79.7 93 40.9
Sed0025700 Sechium edule HOM05D005649 ORTHO05D006837 1.3e-13 79.7 79 49.4
THA.LOC109117151 Tarenaya hassleriana HOM05D005649 ORTHO05D006837 1.7e-13 79.3 85 45.9
EL10Ac3g05710 Beta vulgaris HOM05D005649 ORTHO05D006837 2.2e-13 79.0 88 42.0
Actinidia03109 Actinidia chinensis HOM05D005649 ORTHO05D006837 2.8e-13 78.6 84 44.0
Phvul.004G120100 Phaseolus vulgaris HOM05D005649 ORTHO05D006837 2.8e-13 78.6 84 50.0
Sabra15G0150200 Salix brachista HOM05D005649 ORTHO05D006837 2.8e-13 78.6 93 39.8
CSS0017664 Camellia sinensis var. sinensis HOM05D005649 ORTHO05D006837 3.7e-13 78.2 91 41.8
CANSAT21G0877 Cannabis sativa HOM05D005649 ORTHO05D006837 4.9e-13 77.8 81 45.7
Duzib068G0970 Durio zibethinus HOM05D005649 ORTHO05D006837 4.9e-13 77.8 66 51.5
Gohir.D09G040900 Gossypium hirsutum HOM05D005649 ORTHO05D006837 4.9e-13 77.8 90 44.4
COL.COLO4_14273 Corchorus olitorius HOM05D005649 ORTHO05D006837 8.3e-13 77.0 85 45.9
MELO3C006883.2 Cucumis melo HOM05D005649 ORTHO05D006837 1.1e-12 76.6 87 47.1
CsaV3_3G016880 Cucumis sativus L. HOM05D005649 ORTHO05D006837 1.1e-12 76.6 78 48.7
Prupe.2G290900 Prunus persica HOM05D005649 ORTHO05D006837 1.1e-12 76.6 94 44.7
Dinv35188 Davidia involucrata HOM05D005649 ORTHO05D006837 1.4e-12 76.3 95 38.9
HanXRQChr14g0462161 Helianthus annuus HOM05D005649 ORTHO05D006837 1.4e-12 76.3 79 45.6
Lsat_1_v5_gn_2_132960 Lactuca sativa HOM05D005649 ORTHO05D006837 1.4e-12 76.3 80 43.8
Gohir.A11G009800 Gossypium hirsutum HOM05D005649 ORTHO05D006837 4.1e-12 74.7 92 43.5
Gohir.A12G260100 Gossypium hirsutum HOM05D005649 ORTHO05D006837 4.1e-12 74.7 91 41.8
Gohir.D11G009100 Gossypium hirsutum HOM05D005649 ORTHO05D006837 4.1e-12 74.7 92 43.5
Gorai.007G010700 Gossypium raimondii HOM05D005649 ORTHO05D006837 4.1e-12 74.7 92 43.5
CAN.G769.4 Capsicum annuum HOM05D005649 ORTHO05D006837 5.4e-12 74.3 61 50.8
TWI63G0636 Tripterygium wilfordii HOM05D005649 ORTHO05D006837 7.0e-12 73.9 78 44.9
Ah.07g209060 Amaranthus hybridus HOM05D005649 ORTHO05D006837 9.2e-12 73.6 84 41.7
PGR042G0682 Punica granatum HOM05D005649 ORTHO05D006837 9.2e-12 73.6 64 50.0
Nitab4.5_0002107g0070 Nicotiana tabacum HOM05D005649 ORTHO05D006837 1.2e-11 73.2 90 35.6
AUR62021224 Chenopodium quinoa HOM05D005649 ORTHO05D006837 1.6e-11 72.8 91 39.6
Peaxi162Scf00040g00425 Petunia axillaris HOM05D005649 ORTHO05D006837 1.6e-11 72.8 81 42.0
Gohir.D12G260900 Gossypium hirsutum HOM05D005649 ORTHO05D006837 2.0e-11 72.4 91 40.7
Gorai.008G279600 Gossypium raimondii HOM05D005649 ORTHO05D006837 2.0e-11 72.4 91 40.7
Lj2g0004156 Lotus japonicus HOM05D005649 ORTHO05D006837 2.0e-11 72.4 85 45.9
PSO478G4859 Papaver somniferum HOM05D005649 ORTHO05D006837 2.0e-11 72.4 88 42.0
PSO782G3448 Papaver somniferum HOM05D005649 ORTHO05D006837 2.0e-11 72.4 89 40.4
PSO782G2995 Papaver somniferum HOM05D005649 ORTHO05D006837 2.7e-11 72.0 90 38.9
Potri.012G137400 Populus trichocarpa HOM05D005649 ORTHO05D006837 2.7e-11 72.0 93 38.7
Solyc06g035820.1 Solanum lycopersicum HOM05D005649 ORTHO05D006837 2.7e-11 72.0 63 49.2
Aqoxy7G00428 Aquilegia oxysepala HOM05D005649 ORTHO05D006837 3.5e-11 71.6 85 40.0
AUR62016019 Chenopodium quinoa HOM05D005649 ORTHO05D006837 3.5e-11 71.6 84 42.9
FvH4_7g29091 Fragaria vesca HOM05D005649 ORTHO05D006837 4.5e-11 71.2 93 41.9
FAN03G0279 Fragaria x ananassa HOM05D005649 ORTHO05D006837 4.5e-11 71.2 93 41.9
Cpa.g.sc107.18 Carica papaya HOM05D005649 ORTHO05D006837 5.9e-11 70.9 86 40.7
SalBow6G6599 Salvia bowleyana HOM05D000001 ORTHO05D010467 5.9e-11 70.9 65 46.2
ATR0757G068 Amborella trichopoda HOM05D005649 ORTHO05D006837 7.8e-11 70.5 83 44.6
SalBow6G0552 Salvia bowleyana HOM05D000001 ORTHO05D010467 7.8e-11 70.5 61 47.5
CARHR265080 Cardamine hirsuta HOM05D005649 ORTHO05D006837 1.0e-10 70.1 79 38.0
DCAR_014595 Daucus carota HOM05D005649 ORTHO05D006837 1.0e-10 70.1 84 40.5
Glyma.09G144000 Glycine max HOM05D005649 ORTHO05D006837 1.0e-10 70.1 88 44.3
Manes.14G028300 Manihot esculenta HOM05D005649 ORTHO05D006837 1.0e-10 70.1 93 39.8
MD01G1197500 Malus domestica HOM05D005649 ORTHO05D006837 1.3e-10 69.7 87 41.4
CAN.G28.8 Capsicum annuum HOM05D005649 ORTHO05D006837 1.7e-10 69.3 87 39.1
CDE11G0782 Ceratophyllum demersum HOM05D005649 ORTHO05D006837 2.3e-10 68.9 82 41.5
RcHm_v2.0_Chr1g0376811 Rosa chinensis HOM05D005649 ORTHO05D006837 2.9e-10 68.6 93 43.0
Actinidia34088 Actinidia chinensis HOM05D005649 ORTHO05D006837 3.8e-10 68.2 104 38.5
Aa31LG3G8540 Aethionema arabicum HOM05D005649 ORTHO05D006837 5.0e-10 67.8 82 39.0
DCAR_018179 Daucus carota HOM05D005649 ORTHO05D006837 6.6e-10 67.4 84 42.9
Nitab4.5_0004480g0060 Nicotiana tabacum HOM05D005649 ORTHO05D006837 6.6e-10 67.4 87 40.2
SalBow2G3129 Salvia bowleyana HOM05D005649 ORTHO05D006837 6.6e-10 67.4 78 42.3
PGSC0003DMG400004517 Solanum tuberosum HOM05D000087 ORTHO05D000439 6.6e-10 67.4 63 47.6
Solyc03g026115.1 Solanum lycopersicum HOM05D005649 ORTHO05D006837 1.1e-09 66.6 90 37.8
AT5G52160 Arabidopsis thaliana HOM05D005649 ORTHO05D006837 1.9e-09 65.9 86 33.7
Nn8g41026 Nelumbo nucifera HOM05D005649 ORTHO05D006837 1.9e-09 65.9 89 37.1
Sp6g14410 Schrenkiella parvula HOM05D005649 ORTHO05D006837 1.9e-09 65.9 87 34.5
Sed0000609 Sechium edule HOM05D005649 ORTHO05D006837 2.5e-09 65.5 79 39.2
Cc02_g03310 Coffea canephora HOM05D005649 ORTHO05D006837 3.3e-09 65.1 95 40.0
Migut.F00365 Erythranthe guttata HOM05D005649 ORTHO05D006837 3.3e-09 65.1 62 46.8
AL8G26550 Arabidopsis lyrata HOM05D005649 ORTHO05D006837 4.3e-09 64.7 82 36.6
Carub.0008s1225 Capsella rubella HOM05D005649 ORTHO05D006837 4.3e-09 64.7 67 40.3
Solyc01g009590.3 Solanum lycopersicum HOM05D005649 ORTHO05D006837 4.3e-09 64.7 63 44.4
Sopen01g005120 Solanum pennellii HOM05D005649 ORTHO05D006837 4.3e-09 64.7 63 44.4
Migut.F01138 Erythranthe guttata HOM05D005649 ORTHO05D006837 5.6e-09 64.3 86 39.5
Eucgr.K00231 Eucalyptus grandis HOM05D005649 ORTHO05D006837 7.3e-09 63.9 90 37.8
A03p15810 Brassica napus HOM05D005649 ORTHO05D006837 9.5e-09 63.5 87 33.3
DCAR_018177 Daucus carota HOM05D005649 ORTHO05D006837 9.5e-09 63.5 81 39.5
BcaC01g06166 Brassica carinata HOM05D005649 ORTHO05D006837 1.2e-08 63.2 87 33.3
BcaC01g06170 Brassica carinata HOM05D005649 ORTHO05D006837 1.2e-08 63.2 87 33.3
BolC3t14245H Brassica oleracea HOM05D005649 ORTHO05D006837 1.2e-08 63.2 87 33.3
CAN.G166.5 Capsicum annuum HOM05D005649 ORTHO05D006837 1.2e-08 63.2 81 38.3
QL09p014765 Quercus lobata HOM05D005649 ORTHO05D006837 1.2e-08 63.2 89 42.7
C09p41580 Brassica napus HOM05D005649 ORTHO05D006837 1.6e-08 62.8 94 33.0
BolC9t57041H Brassica oleracea HOM05D005649 ORTHO05D006837 1.6e-08 62.8 78 34.6
BcaB01g04189 Brassica carinata HOM05D005649 ORTHO05D006837 2.1e-08 62.4 89 34.8
BraA03t10871Z Brassica rapa HOM05D005649 ORTHO05D006837 2.1e-08 62.4 87 33.3
C03p18480 Brassica napus HOM05D005649 ORTHO05D006837 3.6e-08 61.6 66 37.9
PSO782G4359 Papaver somniferum HOM05D005649 ORTHO05D006837 3.6e-08 61.6 86 38.4
A10p09850 Brassica napus HOM05D005649 ORTHO05D006837 4.7e-08 61.2 94 31.9
BraA10t43066Z Brassica rapa HOM05D005649 ORTHO05D006837 4.7e-08 61.2 94 31.9
Thhalv10015124m.g Eutrema salsugineum HOM05D005649 ORTHO05D006837 4.7e-08 61.2 66 39.4
Aa31LG2G14360 Aethionema arabicum HOM05D005649 ORTHO05D006837 1.0e-07 60.1 79 36.7
FAN03G1726 Fragaria x ananassa HOM05D005649 ORTHO05D006837 1.0e-07 60.1 53 50.9
Nn1g01375 Nelumbo nucifera HOM05D005649 ORTHO05D006837 2.3e-07 58.9 91 39.6
SGA_v2.0_scaffold10G05368 Striga asiatica HOM05D005649 ORTHO05D006837 8.9e-07 57.0 85 35.3
BcaB08g35564 Brassica carinata HOM05D005649 ORTHO05D006837 1.5e-06 56.2 91 33.0
Peaxi162Scf00132g01516 Petunia axillaris HOM05D005649 ORTHO05D006837 7.5e-06 53.9 80 41.2


User provided reference genes

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