Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G44450 Arabidopsis lyrata HOM05D006631 ORTHO05D008359 6.0e-152 540.8 272 100.0
AT3G61870 Arabidopsis thaliana HOM05D006631 ORTHO05D008359 2.6e-147 525.4 273 97.1
Carub.0005s2861 Capsella rubella HOM05D006631 ORTHO05D008359 6.0e-144 514.2 272 93.4
Sp5g01490 Schrenkiella parvula HOM05D006631 ORTHO05D008359 5.6e-142 507.7 272 91.9
CARHR172210 Cardamine hirsuta HOM05D006631 ORTHO05D008359 4.0e-140 501.5 273 92.7
Thhalv10006166m.g Eutrema salsugineum HOM05D006631 ORTHO05D008359 6.9e-140 500.7 272 91.5
C08p36710 Brassica napus HOM05D006631 ORTHO05D008359 1.7e-135 486.1 274 88.7
BolC8t51253H Brassica oleracea HOM05D006631 ORTHO05D008359 1.7e-135 486.1 274 88.7
A09p53900 Brassica napus HOM05D006631 ORTHO05D008359 1.9e-121 439.5 273 82.4
BraA09t40806Z Brassica rapa HOM05D006631 ORTHO05D008359 1.9e-121 439.5 273 82.4
Aa31LG10G15890 Aethionema arabicum HOM05D006631 ORTHO05D008359 1.5e-115 419.9 277 79.4
BcaC07g42601 Brassica carinata HOM05D006631 ORTHO05D008359 1.3e-114 416.8 273 80.2
THA.LOC104817387 Tarenaya hassleriana HOM05D006631 ORTHO05D008359 6.7e-111 404.4 280 76.4
RcHm_v2.0_Chr1g0360621 Rosa chinensis HOM05D006631 ORTHO05D008359 1.0e-103 380.6 269 72.5
FvH4_7g17240 Fragaria vesca HOM05D006631 ORTHO05D008359 4.3e-102 375.2 267 71.9
Actinidia28101 Actinidia chinensis HOM05D006631 ORTHO05D008359 1.3e-101 373.6 279 68.8
FAN06G3756 Fragaria x ananassa HOM05D006631 ORTHO05D008359 1.4e-100 370.2 269 71.4
CsaV3_3G007830 Cucumis sativus L. HOM05D006631 ORTHO05D008359 2.4e-100 369.4 266 71.1
FAN06G3280 Fragaria x ananassa HOM05D006631 ORTHO05D008359 2.4e-100 369.4 269 71.4
Thecc.01G337000 Theobroma cacao HOM05D006631 ORTHO05D008359 6.9e-100 367.9 277 69.0
Dinv34238 Davidia involucrata HOM05D006631 ORTHO05D008359 9.1e-100 367.5 279 68.8
CANSAT56G2365 Cannabis sativa HOM05D006631 ORTHO05D008359 1.2e-99 367.1 223 79.4
CiPaw.01G079400 Carya illinoinensis HOM05D006631 ORTHO05D008359 1.7e-98 363.2 268 70.1
ClCG05G000610 Citrullus lanatus HOM05D006631 ORTHO05D008359 1.7e-98 363.2 273 69.6
Gohir.A11G099200 Gossypium hirsutum HOM05D006631 ORTHO05D008359 1.7e-98 363.2 278 68.7
Potri.014G102400 Populus trichocarpa HOM05D006631 ORTHO05D008359 1.7e-98 363.2 280 69.6
Manes.05G019200 Manihot esculenta HOM05D006631 ORTHO05D008359 2.2e-98 362.8 280 70.0
SalBow5G1997 Salvia bowleyana HOM05D006631 ORTHO05D008359 2.9e-98 362.5 272 69.9
Cfa003762 Carpinus fangiana HOM05D006631 ORTHO05D008359 3.8e-98 362.1 229 76.9
Ca_09530_v3 Cicer arietinum L. HOM05D006631 ORTHO05D008359 3.8e-98 362.1 284 69.0
Gohir.D11G103700 Gossypium hirsutum HOM05D006631 ORTHO05D008359 3.8e-98 362.1 278 68.3
Gorai.007G111000 Gossypium raimondii HOM05D006631 ORTHO05D008359 3.8e-98 362.1 278 68.3
Cpa.g.sc144.12 Carica papaya HOM05D006631 ORTHO05D008359 5.0e-98 361.7 272 70.2
QL08p046273 Quercus lobata HOM05D006631 ORTHO05D008359 5.0e-98 361.7 279 67.4
Migut.N01525 Erythranthe guttata HOM05D006631 ORTHO05D008359 1.9e-97 359.8 231 77.1
Solyc01g096240.4 Solanum lycopersicum HOM05D006631 ORTHO05D008359 1.9e-97 359.8 264 68.2
TAR375G0108 Trochodendron aralioides HOM05D006631 ORTHO05D008359 1.9e-97 359.8 279 67.0
ECA240G4795 Erigeron canadensis HOM05D006631 ORTHO05D008359 2.5e-97 359.4 274 67.5
AUR62022720 Chenopodium quinoa HOM05D006631 ORTHO05D008359 7.2e-97 357.8 256 69.9
Glyma.03G259400 Glycine max HOM05D006631 ORTHO05D008359 7.2e-97 357.8 230 75.2
PGSC0003DMG400000125 Solanum tuberosum HOM05D006631 ORTHO05D008359 7.2e-97 357.8 264 68.2
Nn1g00373 Nelumbo nucifera HOM05D006631 ORTHO05D008359 9.4e-97 357.5 278 68.7
PSO063G1328 Papaver somniferum HOM05D006631 ORTHO05D008359 1.2e-96 357.1 288 67.4
TWI59G0463 Tripterygium wilfordii HOM05D006631 ORTHO05D008359 1.2e-96 357.1 277 67.5
MSTRG.4800 Avicennia marina HOM05D006631 ORTHO05D008359 1.6e-96 356.7 282 65.2
PSO782G2421 Papaver somniferum HOM05D006631 ORTHO05D008359 1.6e-96 356.7 286 67.5
Duzib138G0935 Durio zibethinus HOM05D006631 ORTHO05D008359 2.7e-96 355.9 277 66.8
PGR031G0416 Punica granatum HOM05D006631 ORTHO05D008359 3.6e-96 355.5 223 77.6
Medtr7g117970 Medicago truncatula HOM05D006631 ORTHO05D008359 4.7e-96 355.1 256 70.3
Sopen01g040000 Solanum pennellii HOM05D006631 ORTHO05D008359 4.7e-96 355.1 264 67.4
arahy.Tifrunner.gnm1.ann1.NC261Q Arachis hypogaea HOM05D006631 ORTHO05D008359 1.0e-95 354.0 235 73.2
MD01G1086200 Malus domestica HOM05D006631 ORTHO05D008359 1.0e-95 354.0 280 67.5
Lj1g0014889 Lotus japonicus HOM05D006631 ORTHO05D008359 1.8e-95 353.2 279 68.8
arahy.Tifrunner.gnm1.ann1.588I57 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.3e-95 352.8 224 75.4
CSS0022670 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.3e-95 352.8 269 66.9
Rhsim01G0176500 Rhododendron simsii HOM05D006631 ORTHO05D008359 2.3e-95 352.8 232 74.1
GSVIVG01027398001 Vitis vinifera HOM05D006631 ORTHO05D008359 2.3e-95 352.8 276 66.7
MELO3C005999.2 Cucumis melo HOM05D006631 ORTHO05D008359 3.0e-95 352.4 295 63.7
Psat3g001400 Pisum sativum HOM05D006631 ORTHO05D008359 3.0e-95 352.4 276 67.8
AUR62004534 Chenopodium quinoa HOM05D006631 ORTHO05D008359 6.7e-95 351.3 269 67.3
Eucgr.D02642 Eucalyptus grandis HOM05D006631 ORTHO05D008359 8.8e-95 350.9 265 66.8
Lalb_Chr19g0133561 Lupinus albus HOM05D006631 ORTHO05D008359 1.1e-94 350.5 226 74.8
Hund16731 Selenicereus undatus HOM05D006631 ORTHO05D008359 1.5e-94 350.1 239 74.1
Glyma.19G258300 Glycine max HOM05D006631 ORTHO05D008359 2.0e-94 349.7 264 68.2
Atru.chr5.731 Acer truncatum HOM05D006631 ORTHO05D008359 2.6e-94 349.4 221 75.6
Phvul.006G115700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 2.6e-94 349.4 275 66.5
FAN03G0022 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.3e-94 349.0 259 69.9
Sabra14G0075400 Salix brachista HOM05D006631 ORTHO05D008359 4.4e-94 348.6 204 83.3
Ciclev10021628m.g Citrus clementina HOM05D006631 ORTHO05D008359 1.7e-93 346.7 277 66.1
Prupe.2G193800 Prunus persica HOM05D006631 ORTHO05D008359 6.3e-93 344.7 280 66.1
FAN01G0947 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.2e-93 344.4 204 82.4
FAN10G3243 Fragaria x ananassa HOM05D006631 ORTHO05D008359 8.2e-93 344.4 204 82.4
TPR.G4790 Trifolium pratense HOM05D006631 ORTHO05D008359 1.1e-92 344.0 226 75.2
COL.COLO4_06257 Corchorus olitorius HOM05D006631 ORTHO05D008359 2.4e-92 342.8 261 70.1
Peaxi162Scf00767g00111 Petunia axillaris HOM05D006631 ORTHO05D008359 3.1e-92 342.4 204 80.9
MSTRG.28278 Avicennia marina HOM05D006631 ORTHO05D008359 4.1e-92 342.0 274 66.4
Lj9A602T26 Lonicera japonica HOM05D006631 ORTHO05D008359 5.3e-92 341.7 248 71.0
Nitab4.5_0002527g0020 Nicotiana tabacum HOM05D006631 ORTHO05D008359 5.3e-92 341.7 279 64.5
Phvul.010G116700 Phaseolus vulgaris HOM05D006631 ORTHO05D008359 7.0e-92 341.3 274 65.0
MBI04_g33414_MAGBIO Magnolia biondii HOM05D006631 ORTHO05D008359 7.7e-91 337.8 304 61.8
Haze_15698 Corylus avellana HOM05D006631 ORTHO05D008359 3.8e-90 335.5 204 80.4
Glyma.16G021600 Glycine max HOM05D006631 ORTHO05D008359 6.5e-90 334.7 271 64.9
VMungo0540G1103 Vigna mungo HOM05D006631 ORTHO05D008359 6.5e-90 334.7 204 77.9
CAN.G1415.2 Capsicum annuum HOM05D006631 ORTHO05D008359 8.5e-90 334.3 204 78.4
HanXRQChr03g0094051 Helianthus annuus HOM05D006631 ORTHO05D008359 9.4e-89 330.9 227 74.9
Sc23g0001960 Simmondsia chinensis HOM05D006631 ORTHO05D008359 1.6e-88 330.1 203 78.3
Lsat_1_v5_gn_3_141021 Lactuca sativa HOM05D006631 ORTHO05D008359 8.0e-88 327.8 276 65.6
vmacro12589 Vaccinium macrocarpon HOM05D006631 ORTHO05D008359 2.3e-87 326.2 210 77.1
SEGI_25065 Sequoiadendron giganteum HOM05D006631 ORTHO05D008359 3.0e-87 325.9 239 69.0
Nitab4.5_0000307g0140 Nicotiana tabacum HOM05D006631 ORTHO05D008359 5.2e-87 325.1 267 64.4
Ah.05g179220 Amaranthus hybridus HOM05D006631 ORTHO05D008359 2.0e-86 323.2 273 61.9
VMungo0331G0918 Vigna mungo HOM05D006631 ORTHO05D008359 2.8e-85 319.3 270 63.3
HPP92_002500 Vanilla planifolia HOM05D006631 ORTHO05D008359 6.3e-85 318.2 254 65.0
CDE07G1250 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.4e-84 316.2 247 66.4
Lalb_Chr17g0342841 Lupinus albus HOM05D006631 ORTHO05D008359 3.1e-84 315.8 224 69.2
Sed0011774 Sechium edule HOM05D006631 ORTHO05D008359 4.1e-84 315.5 271 62.7
Os02g0122500 Oryza sativa ssp. japonica HOM05D006631 ORTHO05D008359 4.5e-83 312.0 218 72.0
Mapoly0049s0137 Marchantia polymorpha HOM05D006631 ORTHO05D008359 1.9e-81 306.6 223 69.5
ATR0620G070 Amborella trichopoda HOM05D006631 ORTHO05D008359 8.8e-79 297.7 247 59.9
SMO143G0155 Selaginella moellendorffii HOM05D006631 ORTHO05D008359 1.2e-78 297.4 202 72.3
Oeu007870.1 Olea europaea HOM05D006631 ORTHO05D008359 1.1e-76 290.8 181 78.5
Pp3c5_3210 Physcomitrium patens HOM05D006631 ORTHO05D008359 2.7e-75 286.2 210 70.0
CBR_g37545 Chara braunii HOM05D006631 ORTHO05D008359 4.9e-69 265.4 197 67.5
FAN10G2512 Fragaria x ananassa HOM05D006631 ORTHO05D008359 3.1e-68 262.7 270 56.7
MCO07G366 Micromonas commoda HOM05D006631 ORTHO05D008359 1.9e-65 253.4 226 58.0
DCAR_008654 Daucus carota HOM05D006631 ORTHO05D008359 3.0e-63 246.1 201 64.7
arahy.Tifrunner.gnm1.ann1.S1C8P4 Arachis hypogaea HOM05D006631 ORTHO05D008359 2.6e-62 243.0 272 51.8
EL10Ac1g00220 Beta vulgaris HOM05D006631 ORTHO05D008359 2.6e-62 243.0 215 61.9
MD07G1155100 Malus domestica HOM05D006631 ORTHO05D008359 3.4e-62 242.7 158 76.6
Cre12.g519300 Chlamydomonas reinhardtii HOM05D006631 ORTHO05D008359 4.9e-61 238.8 247 54.3
SGA_v2.0_scaffold581G53044 Striga asiatica HOM05D006631 ORTHO05D008359 1.4e-60 237.3 159 72.3
Cc02_g39740 Coffea canephora HOM05D006631 ORTHO05D008359 4.1e-60 235.7 203 59.6
arahy.Tifrunner.gnm1.ann1.GG2XE6 Arachis hypogaea HOM05D006631 ORTHO05D008359 4.3e-57 225.7 217 54.8
PRCOL_00004956 Prasinoderma coloniale HOM05D006631 ORTHO05D008359 8.0e-56 221.5 232 50.0
CDE09G1080 Ceratophyllum demersum HOM05D006631 ORTHO05D008359 2.3e-55 219.9 255 47.1
CSS0025910 Camellia sinensis var. sinensis HOM05D006631 ORTHO05D008359 2.3e-50 203.4 116 81.0
AagrBONN_evm.TU.Sc2ySwM_362.2495 Anthoceros agrestis HOM05D006631 ORTHO05D008359 7.8e-43 178.3 111 78.4
unitig_8.g3405 Utricularia gibba HOM05D006631 ORTHO05D008359 3.9e-42 176.0 151 63.6
TAR374G1086 Trochodendron aralioides HOM05D000482 ORTHO05D000349 3.1e-39 166.4 212 47.6
TAR374G0170 Trochodendron aralioides HOM05D000482 ORTHO05D000349 7.3e-25 118.6 93 62.4
TAR374G1450 Trochodendron aralioides HOM05D000482 ORTHO05D000349 2.6e-22 110.2 187 38.5
unitig_22.g6820 Utricularia gibba HOM05D006631 ORTHO05D008359 2.5e-09 67.0 62 59.7
GSVIVG01001070001 Vitis vinifera HOM05D006631 ORTHO05D008359 4.0e-07 59.7 34 76.5


User provided reference genes

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