Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL5G26470 Arabidopsis lyrata HOM05D010158 ORTHO05D016603 1.5e-30 135.6 72 100.0
AT3G47295 Arabidopsis thaliana HOM05D010158 ORTHO05D016603 7.4e-25 116.7 72 87.5
BolC3t19425H Brassica oleracea HOM05D010158 ORTHO05D016603 6.2e-24 113.6 72 84.7
BraA06t25114Z Brassica rapa HOM05D010158 ORTHO05D016603 8.2e-24 113.2 72 83.3
C03p71420 Brassica napus HOM05D010158 ORTHO05D016603 2.4e-23 111.7 72 83.3
A06p20390 Brassica napus HOM05D010158 ORTHO05D016603 4.5e-22 107.5 72 83.3
Thhalv10010883m.g Eutrema salsugineum HOM05D010158 ORTHO05D016603 1.0e-21 106.3 72 80.6
BcaB01g00940 Brassica carinata HOM05D010158 ORTHO05D016603 2.2e-21 105.1 72 79.2
Carub.0005s1338 Capsella rubella HOM05D010158 ORTHO05D016603 6.5e-21 103.6 72 80.6
CARHR155910 Cardamine hirsuta HOM05D010158 ORTHO05D016603 4.6e-19 97.4 73 75.3
BcaC04g19826 Brassica carinata HOM05D010158 ORTHO05D014771 2.0e-09 65.5 71 52.1
BolC9t57923H Brassica oleracea HOM05D010158 ORTHO05D014771 2.0e-09 65.5 71 52.1
A10p15610 Brassica napus HOM05D010158 ORTHO05D014771 2.5e-09 65.1 71 52.1
C09p50730 Brassica napus HOM05D010158 ORTHO05D014771 2.5e-09 65.1 71 52.1
BraA10t43672Z Brassica rapa HOM05D010158 ORTHO05D014771 2.5e-09 65.1 71 52.1
CARHR272510 Cardamine hirsuta HOM05D010158 ORTHO05D014771 3.3e-09 64.7 62 56.5
BcaB01g04501 Brassica carinata HOM05D010158 ORTHO05D014771 4.3e-09 64.3 71 52.1
Aa31LG11G420 Aethionema arabicum HOM05D010158 ORTHO05D014771 5.7e-09 63.9 65 60.0
Sp6g20350 Schrenkiella parvula HOM05D010158 ORTHO05D014771 9.7e-09 63.2 71 52.1
Thhalv10015190m.g Eutrema salsugineum HOM05D010158 ORTHO05D014771 2.2e-08 62.0 62 53.2
AT5G58650 Arabidopsis thaliana HOM05D010158 ORTHO05D014771 1.1e-07 59.7 66 51.5
Carub.0008s1927 Capsella rubella HOM05D010158 ORTHO05D014771 5.3e-07 57.4 63 54.0


User provided reference genes

Program Settings