Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G40990 Arabidopsis lyrata HOM05D022653 ORTHO05D021428 4.1e-28 127.5 70 100.0
A05p03010 Brassica napus HOM05D000279 ORTHO05D000498 5.7e-14 80.5 62 71.0
BolC4t21998H Brassica oleracea HOM05D000279 ORTHO05D021428 9.7e-14 79.7 63 68.3
A04p32240 Brassica napus HOM05D000279 ORTHO05D000498 1.3e-13 79.3 69 66.7
BcaC02g12430 Brassica carinata HOM05D000279 ORTHO05D000498 1.7e-13 79.0 62 69.4
CARHR260850 Cardamine hirsuta HOM05D000279 ORTHO05D017442 1.7e-13 79.0 67 62.7
CARHR137510 Cardamine hirsuta HOM05D000279 ORTHO05D000498 2.8e-13 78.2 60 70.0
AL4G40940 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.7e-13 77.8 60 70.0
BcaC02g12431 Brassica carinata HOM05D000279 ORTHO05D021428 3.7e-13 77.8 63 66.7
A03p23650 Brassica napus HOM05D000279 ORTHO05D000498 2.4e-12 75.1 66 62.1
C03p28200 Brassica napus HOM05D000279 ORTHO05D000498 2.4e-12 75.1 66 62.1
BolC3t15191H Brassica oleracea HOM05D000279 ORTHO05D000498 2.4e-12 75.1 66 62.1
BraA03t11581Z Brassica rapa HOM05D000279 ORTHO05D000498 2.4e-12 75.1 66 62.1
A05p02990 Brassica napus HOM05D000279 ORTHO05D000498 3.1e-12 74.7 68 60.3
BcaNung03239 Brassica carinata HOM05D000279 ORTHO05D000498 4.1e-12 74.3 64 67.2
AL4G40930 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 7.0e-12 73.6 61 65.6
AL4G40950 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 7.0e-12 73.6 63 65.1
AL2G15770 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 3.5e-11 71.2 62 66.1
C04p03610 Brassica napus HOM05D000279 ORTHO05D000498 1.0e-10 69.7 63 55.6
C08p52660 Brassica napus HOM05D000279 ORTHO05D000498 1.0e-10 69.7 61 62.3
BolC4t21996H Brassica oleracea HOM05D000279 ORTHO05D000498 1.0e-10 69.7 63 55.6
BraA05t19289Z Brassica rapa HOM05D000279 ORTHO05D000498 1.3e-10 69.3 69 65.2
A10p02190 Brassica napus HOM05D000279 ORTHO05D000498 1.7e-10 68.9 61 62.3
BraA10t42487Z Brassica rapa HOM05D000279 ORTHO05D000498 1.7e-10 68.9 61 62.3
Carub.0004s2486 Capsella rubella HOM05D000279 ORTHO05D000498 1.7e-10 68.9 62 61.3
C04p03640 Brassica napus HOM05D022653 ORTHO05D021428 2.2e-10 68.6 69 56.5
BolC8t52792H Brassica oleracea HOM05D000279 ORTHO05D000498 2.2e-10 68.6 61 60.7
A05p03020 Brassica napus HOM05D000279 ORTHO05D013796 5.0e-10 67.4 65 60.0
A09p68220 Brassica napus HOM05D000279 ORTHO05D000498 5.0e-10 67.4 60 61.7
BraA09t42157Z Brassica rapa HOM05D000279 ORTHO05D000498 5.0e-10 67.4 60 61.7
C05p02070 Brassica napus HOM05D000279 ORTHO05D000498 8.5e-10 66.6 61 60.7
CARHR137550 Cardamine hirsuta HOM05D000279 ORTHO05D013796 8.5e-10 66.6 91 49.5
AT2G42465 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 1.9e-09 65.5 61 62.3
A09p68620 Brassica napus HOM05D000279 ORTHO05D000498 1.9e-09 65.5 61 60.7
C02p12630 Brassica napus HOM05D000279 ORTHO05D000498 1.9e-09 65.5 61 60.7
C04p32290 Brassica napus HOM05D000279 ORTHO05D000498 1.9e-09 65.5 61 60.7
BraA09t42204Z Brassica rapa HOM05D000279 ORTHO05D000498 1.9e-09 65.5 61 60.7
Thhalv10008254m.g Eutrema salsugineum HOM05D000279 ORTHO05D000498 1.9e-09 65.5 60 61.7
BcaC07g42310 Brassica carinata HOM05D000037 ORTHO05D001684 3.2e-09 64.7 60 58.3
Carub.0004s2488 Capsella rubella HOM05D000279 ORTHO05D000498 4.2e-09 64.3 46 67.4
Carub.0004s2491 Capsella rubella HOM05D000279 ORTHO05D000498 4.2e-09 64.3 56 64.3
CARHR127280 Cardamine hirsuta HOM05D000279 ORTHO05D000498 4.2e-09 64.3 61 59.0
AL4G41020 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 1.6e-08 62.4 106 40.6
BcaNung03238 Brassica carinata HOM05D000279 ORTHO05D013796 1.6e-08 62.4 64 57.8
AL4G40910 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 2.7e-08 61.6 61 60.7
BolC4t22000H Brassica oleracea HOM05D000279 ORTHO05D013796 4.7e-08 60.8 55 63.6
BcaC02g12432 Brassica carinata HOM05D000279 ORTHO05D013796 8.0e-08 60.1 55 63.6
A10p23780 Brassica napus HOM05D000279 ORTHO05D000498 8.0e-08 60.1 63 60.3
BcaC04g19022 Brassica carinata HOM05D000279 ORTHO05D000498 1.0e-07 59.7 63 60.3
BcaNung03236 Brassica carinata HOM05D000279 ORTHO05D013796 1.0e-07 59.7 65 55.4
C09p62590 Brassica napus HOM05D000279 ORTHO05D000498 1.0e-07 59.7 63 60.3
BolC9t59096H Brassica oleracea HOM05D000279 ORTHO05D000498 1.0e-07 59.7 63 60.3
AL4G41000 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 2.3e-07 58.5 37 83.8
AT2G42480 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 2.3e-07 58.5 46 63.0
BraA10t44440Z Brassica rapa HOM05D000279 ORTHO05D000498 4.0e-07 57.8 62 58.1
BraA10t44441Z Brassica rapa HOM05D000279 ORTHO05D000498 5.2e-07 57.4 62 58.1
A02p13670 Brassica napus HOM05D000279 ORTHO05D040553 6.7e-07 57.0 91 42.9
CARHR137530 Cardamine hirsuta HOM05D000279 ORTHO05D000498 6.7e-07 57.0 61 59.0
BcaC04g18990 Brassica carinata HOM05D000279 ORTHO05D000498 8.8e-07 56.6 62 56.5
BolC4t21997H Brassica oleracea HOM05D000279 ORTHO05D000498 8.8e-07 56.6 63 55.6
BraA02t06424Z Brassica rapa HOM05D000279 ORTHO05D040553 1.2e-06 56.2 91 42.9
Sp4g24610 Schrenkiella parvula HOM05D000279 ORTHO05D000498 1.2e-06 56.2 56 53.6
AT2G42460 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 1.5e-06 55.8 67 50.7
BraA06t27147Z Brassica rapa HOM05D000279 ORTHO05D000498 2.0e-06 55.5 59 54.2
AT2G42470 Arabidopsis thaliana HOM05D000279 ORTHO05D000498 2.6e-06 55.1 60 58.3
CARHR256260 Cardamine hirsuta HOM05D000279 ORTHO05D000498 2.6e-06 55.1 43 67.4
BolC9t59049H Brassica oleracea HOM05D000279 ORTHO05D000498 4.4e-06 54.3 62 54.8
AL1G20340 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 5.7e-06 53.9 59 59.3
AL4G40960 Arabidopsis lyrata HOM05D000279 ORTHO05D000498 5.7e-06 53.9 60 58.3
C09p62080 Brassica napus HOM05D000279 ORTHO05D000498 5.7e-06 53.9 62 54.8


User provided reference genes

Program Settings