Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G47660 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 2.8e-46 188.3 101 100.0
AT5G43070 Arabidopsis thaliana HOM05D001326 ORTHO05D004163 7.4e-23 110.5 79 74.7
AL8G17650 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 8.2e-22 107.1 100 66.0
AL4G15940 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 1.4e-21 106.3 75 81.3
AL47U10010 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 1.8e-21 105.9 100 65.0
Thhalv10003281m.g Eutrema salsugineum HOM05D001326 ORTHO05D004163 9.1e-13 77.0 96 53.1
CARHR180920 Cardamine hirsuta HOM05D001326 ORTHO05D004163 1.0e-11 73.6 89 53.9
Carub.0008s0565 Capsella rubella HOM05D001326 ORTHO05D004163 1.3e-11 73.2 77 57.1
AL1G53320 Arabidopsis lyrata HOM05D001326 ORTHO05D004163 9.4e-10 67.0 74 55.4
Glyma.06G043700 Glycine max HOM05D001326 ORTHO05D004163 6.1e-09 64.3 95 44.2
Aa31LG5G18920 Aethionema arabicum HOM05D001326 ORTHO05D004163 8.0e-09 63.9 72 56.9
THA.LOC104820501 Tarenaya hassleriana HOM05D001326 ORTHO05D004163 1.0e-08 63.5 96 45.8
CARHR036740 Cardamine hirsuta HOM05D001326 ORTHO05D004163 1.8e-08 62.8 95 47.4
Atru.chr13.770 Acer truncatum HOM05D001326 ORTHO05D004163 2.3e-08 62.4 90 42.2
THA.LOC104814178 Tarenaya hassleriana HOM05D001326 ORTHO05D004163 2.3e-08 62.4 95 45.3
AT1G47200 Arabidopsis thaliana HOM05D001326 ORTHO05D004163 3.0e-08 62.0 74 54.1
Glyma.04G043200 Glycine max HOM05D001326 ORTHO05D004163 8.8e-08 60.5 69 50.7
Gohir.A05G206500 Gossypium hirsutum HOM05D001326 ORTHO05D004163 1.1e-07 60.1 81 49.4
Phvul.009G068700 Phaseolus vulgaris HOM05D001326 ORTHO05D004163 1.5e-07 59.7 75 49.3
vmacro23170 Vaccinium macrocarpon HOM05D001326 ORTHO05D004163 2.0e-07 59.3 73 52.1
VMungo1309G2681 Vigna mungo HOM05D001326 ORTHO05D004163 2.0e-07 59.3 81 45.7
Duzib093G0342 Durio zibethinus HOM05D001326 ORTHO05D004163 3.3e-07 58.5 72 48.6
BcaC08g42930 Brassica carinata HOM05D001326 ORTHO05D004163 4.4e-07 58.2 66 51.5
A08p05940 Brassica napus HOM05D001326 ORTHO05D004163 4.4e-07 58.2 69 53.6
A10p06640 Brassica napus HOM05D001326 ORTHO05D004163 4.4e-07 58.2 70 48.6
C06p01670 Brassica napus HOM05D001326 ORTHO05D004163 4.4e-07 58.2 66 51.5
BolC6t35298H Brassica oleracea HOM05D001326 ORTHO05D004163 4.4e-07 58.2 66 51.5
BraA08t32595Z Brassica rapa HOM05D001326 ORTHO05D004163 4.4e-07 58.2 69 53.6
BraA10t42922Z Brassica rapa HOM05D001326 ORTHO05D004163 4.4e-07 58.2 70 48.6
Carub.0001s3596 Capsella rubella HOM05D001326 ORTHO05D004163 4.4e-07 58.2 84 50.0
Sp1g34320 Schrenkiella parvula HOM05D001326 ORTHO05D004163 4.4e-07 58.2 75 48.0
BcaC07g37236 Brassica carinata HOM05D001326 ORTHO05D004163 9.7e-07 57.0 70 50.0
C08p06600 Brassica napus HOM05D001326 ORTHO05D004163 9.7e-07 57.0 70 50.0
BolC8t47503H Brassica oleracea HOM05D001326 ORTHO05D004163 9.7e-07 57.0 70 50.0
Cpa.g.sc21.138 Carica papaya HOM05D001326 ORTHO05D004163 9.7e-07 57.0 91 39.6
ClCG08G016240 Citrullus lanatus HOM05D001326 ORTHO05D004163 9.7e-07 57.0 49 59.2
Thhalv10011812m.g Eutrema salsugineum HOM05D001326 ORTHO05D004163 9.7e-07 57.0 103 42.7
Thecc.08G095300 Theobroma cacao HOM05D001326 ORTHO05D004163 9.7e-07 57.0 84 45.2
Actinidia08267 Actinidia chinensis HOM05D001326 ORTHO05D004163 1.7e-06 56.2 86 41.9
BcaB04g17546 Brassica carinata HOM05D001326 ORTHO05D004163 1.7e-06 56.2 90 44.4
SalBow6G1031 Salvia bowleyana HOM05D001326 ORTHO05D004163 1.7e-06 56.2 72 47.2
Oeu016580.1 Olea europaea HOM05D001326 ORTHO05D004163 2.2e-06 55.8 70 47.1
CDE04G2550 Ceratophyllum demersum HOM05D001326 ORTHO05D004163 2.8e-06 55.5 64 45.3
Prupe.1G429000 Prunus persica HOM05D001326 ORTHO05D004163 2.8e-06 55.5 58 51.7
BcaB07g33854 Brassica carinata HOM05D001326 ORTHO05D004163 3.7e-06 55.1 75 45.3
CSS0008374 Camellia sinensis var. sinensis HOM05D001326 ORTHO05D004163 3.7e-06 55.1 71 46.5
CANSAT25G2642 Cannabis sativa HOM05D001326 ORTHO05D004163 4.8e-06 54.7 94 38.3
Migut.O00599 Erythranthe guttata HOM05D001326 ORTHO05D004163 4.8e-06 54.7 61 49.2
SGA_v2.0_scaffold14G06954 Striga asiatica HOM05D001326 ORTHO05D004163 4.8e-06 54.7 82 45.1
COL.COLO4_28576 Corchorus olitorius HOM05D001326 ORTHO05D004163 6.3e-06 54.3 84 45.2
DCAR_008838 Daucus carota HOM05D001326 ORTHO05D004163 6.3e-06 54.3 61 52.5
Lalb_Chr14g0368421 Lupinus albus HOM05D001326 ORTHO05D004163 6.3e-06 54.3 92 42.4
Oeu036969.1 Olea europaea HOM05D001326 ORTHO05D004163 8.2e-06 53.9 102 40.2


User provided reference genes

Program Settings