Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G33530 Arabidopsis lyrata HOM05D000166 ORTHO05D015373 1.0e-81 306.6 150 100.0
AL3G33600 Arabidopsis lyrata HOM05D000166 ORTHO05D015373 9.7e-19 97.4 47 100.0
A09p16370 Brassica napus HOM05D000166 ORTHO05D000812 1.3e-07 60.5 48 64.6
BolC9t54893H Brassica oleracea HOM05D000166 ORTHO05D000812 1.3e-07 60.5 48 64.6
BraA09t37277Z Brassica rapa HOM05D000166 ORTHO05D000812 1.3e-07 60.5 48 64.6
BcaC04g22387 Brassica carinata HOM05D000166 ORTHO05D000812 2.9e-07 59.3 61 50.8
Thhalv10012589m.g Eutrema salsugineum HOM05D000166 ORTHO05D000812 5.0e-07 58.5 45 68.9
BcaB07g31314 Brassica carinata HOM05D000166 ORTHO05D000812 6.5e-07 58.2 48 60.4
Aa31LG3G6900 Aethionema arabicum HOM05D000166 ORTHO05D000812 8.5e-07 57.8 60 51.7
THA.LOC104800316 Tarenaya hassleriana HOM05D000166 ORTHO05D000812 8.5e-07 57.8 47 59.6
BcaB01g02950 Brassica carinata HOM05D000166 ORTHO05D000812 1.1e-06 57.4 45 66.7
BcaC01g04852 Brassica carinata HOM05D000166 ORTHO05D000812 1.1e-06 57.4 45 68.9
BcaC01g04853 Brassica carinata HOM05D000166 ORTHO05D000812 1.1e-06 57.4 45 68.9
A03p27470 Brassica napus HOM05D000166 ORTHO05D000812 1.1e-06 57.4 45 68.9
C03p33140 Brassica napus HOM05D000166 ORTHO05D000812 1.1e-06 57.4 45 68.9
BolC3t15638H Brassica oleracea HOM05D000166 ORTHO05D000812 1.1e-06 57.4 45 68.9
BraA03t11959Z Brassica rapa HOM05D000166 ORTHO05D000812 1.1e-06 57.4 45 68.9
BraA03t11961Z Brassica rapa HOM05D000166 ORTHO05D000812 1.1e-06 57.4 45 68.9
Carub.0008s0967 Capsella rubella HOM05D000166 ORTHO05D000812 1.9e-06 56.6 46 63.0
A09p16390 Brassica napus HOM05D000166 ORTHO05D000812 2.5e-06 56.2 45 64.4
BraA09t37278Z Brassica rapa HOM05D000166 ORTHO05D000812 2.5e-06 56.2 45 64.4
Carub.0008s0965 Capsella rubella HOM05D000166 ORTHO05D000812 3.2e-06 55.8 46 58.7
THA.LOC104809042 Tarenaya hassleriana HOM05D000166 ORTHO05D000812 3.2e-06 55.8 46 60.9
Sp6g11130 Schrenkiella parvula HOM05D000166 ORTHO05D000812 4.2e-06 55.5 45 64.4
BcaC04g22386 Brassica carinata HOM05D000166 ORTHO05D012625 5.5e-06 55.1 45 62.2
C09p19880 Brassica napus HOM05D000166 ORTHO05D000812 5.5e-06 55.1 45 62.2
BolC9t54894H Brassica oleracea HOM05D000166 ORTHO05D000812 5.5e-06 55.1 45 62.2
Carub.0008s0962 Capsella rubella HOM05D000166 ORTHO05D000812 5.5e-06 55.1 46 63.0
BcaB08g35347 Brassica carinata HOM05D000166 ORTHO05D000812 7.2e-06 54.7 45 64.4
AL8G23720 Arabidopsis lyrata HOM05D000166 ORTHO05D000812 9.4e-06 54.3 46 63.0
AT5G49760 Arabidopsis thaliana HOM05D000166 ORTHO05D000812 9.4e-06 54.3 46 63.0


User provided reference genes

Program Settings