Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 7.0e-75 283.9 145 100.0
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 7.8e-66 253.8 145 89.7
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 3.4e-61 238.4 143 86.0
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 7.5e-61 237.3 146 84.9
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 1.0e-57 226.9 146 80.8
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 1.0e-57 226.9 146 80.8
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 5.1e-57 224.6 146 80.1
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 5.1e-57 224.6 146 80.1
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 5.1e-57 224.6 146 80.1
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 4.3e-56 221.5 136 82.4
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 1.2e-55 219.9 145 79.3
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 1.1e-54 216.9 146 78.1
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 1.9e-43 179.5 145 69.7
BraA07t30596Z Brassica rapa HOM05D007960 ORTHO05D010026 5.1e-41 171.4 140 68.6
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 1.1e-30 137.1 134 61.9
BcaC08g45611 Brassica carinata HOM05D007960 ORTHO05D010026 1.5e-21 106.7 68 77.9
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 7.1e-19 97.8 142 42.3
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 1.3e-17 93.6 116 45.7
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 1.3e-17 93.6 116 45.7
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 6.7e-17 91.3 116 44.8
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 1.1e-16 90.5 115 46.1
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 2.5e-16 89.4 107 47.7
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 3.3e-16 89.0 74 60.8
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 1.3e-15 87.0 125 42.4
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 4.8e-15 85.1 126 46.0
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 1.1e-14 84.0 119 43.7
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 1.8e-14 83.2 101 49.5
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 4.1e-14 82.0 117 43.6
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 6.9e-14 81.3 102 49.0
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 6.9e-14 81.3 133 40.6
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 1.2e-13 80.5 135 41.5
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 2.0e-13 79.7 134 39.6
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 2.6e-13 79.3 130 42.3
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 7.7e-13 77.8 113 46.9
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 2.2e-12 76.3 95 52.6
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 2.2e-12 76.3 112 42.0
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 3.8e-12 75.5 112 47.3
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 3.8e-12 75.5 130 38.5
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 8.5e-12 74.3 111 44.1
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 2.5e-11 72.8 78 52.6
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 2.5e-11 72.8 78 52.6
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 9.4e-11 70.9 82 46.3
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 2.1e-10 69.7 117 38.5
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 3.6e-10 68.9 83 50.6
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 6.1e-10 68.2 102 41.2
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 1.4e-09 67.0 111 40.5
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 1.8e-09 66.6 114 42.1
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 6.7e-09 64.7 122 40.2
Rhsim08G0149000 Rhododendron simsii HOM05D007960 ORTHO05D010026 8.8e-09 64.3 87 46.0
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 1.1e-08 63.9 98 43.9
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 1.1e-08 63.9 119 41.2
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 1.5e-08 63.5 90 48.9
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 1.5e-08 63.5 70 52.9
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 2.5e-08 62.8 90 45.6
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 2.5e-08 62.8 109 43.1
ClCG04G011400 Citrullus lanatus HOM05D007960 ORTHO05D010026 4.3e-08 62.0 74 45.9
Duzib205G0322 Durio zibethinus HOM05D007960 ORTHO05D010026 4.3e-08 62.0 55 54.5
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 4.3e-08 62.0 114 40.4
ECA247G3950 Erigeron canadensis HOM05D007960 ORTHO05D010026 1.7e-07 60.1 126 38.1
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 1.7e-07 60.1 80 45.0
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 2.2e-07 59.7 64 51.6
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 2.2e-07 59.7 78 51.3
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 2.2e-07 59.7 106 43.4
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 2.2e-07 59.7 107 39.3
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 2.8e-07 59.3 83 45.8
Actinidia16062 Actinidia chinensis HOM05D000227 ORTHO05D001491 3.7e-07 58.9 69 47.8
MSTRG.7902 Avicennia marina HOM05D007558 ORTHO05D009245 4.8e-07 58.5 105 35.2
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 4.8e-07 58.5 124 41.9
MD13G1093000 Malus domestica HOM05D007558 ORTHO05D009245 8.2e-07 57.8 139 33.8
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 8.2e-07 57.8 124 41.1
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 1.8e-06 56.6 141 31.9
ATR0730G198 Amborella trichopoda HOM05D007960 ORTHO05D010026 3.1e-06 55.8 112 33.9
COL.COLO4_32178 Corchorus olitorius HOM05D007960 ORTHO05D010026 6.9e-06 54.7 54 51.9


User provided reference genes

Program Settings