Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL2G18250 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.4e-47 192.6 92 100.0
AT1G58248 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.3e-34 149.4 89 79.8
AT1G58245 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.2e-33 143.7 84 79.8
AT5G38378 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.1e-32 140.6 87 79.3
AT3G24465 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.0e-32 140.2 87 79.3
AT5G36720 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.0e-31 139.8 87 78.2
AT5G36805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.0e-31 139.8 87 78.2
Carub.0002s0633 Capsella rubella HOM05D006717 ORTHO05D008139 3.1e-28 128.3 88 67.0
AL2G18220 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.9e-27 124.0 89 69.7
AL2G18240 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 7.7e-27 123.6 89 68.5
AT1G58242 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 1.5e-25 119.4 89 66.3
AT5G34828 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.2e-25 117.9 89 62.9
CARHR022330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 8.0e-24 113.6 85 63.5
Thhalv10009497m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.2e-17 91.3 88 55.7
CARHR031850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 4.7e-16 87.8 78 53.8
AT1G21866 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.3e-15 85.5 91 49.5
AT1G54775 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.3e-15 85.5 60 73.3
AL1G35280 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 5.2e-15 84.3 87 48.3
AL1G35140 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 6.8e-15 84.0 78 51.3
AL1G35260 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 8.8e-15 83.6 78 51.3
BraA09t38826Z Brassica rapa HOM05D006717 ORTHO05D008139 2.0e-14 82.4 78 52.6
AT1G21864 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.6e-14 82.0 91 47.3
A09p33030 Brassica napus HOM05D006717 ORTHO05D008139 3.4e-14 81.6 78 51.3
BraA09t38844Z Brassica rapa HOM05D006717 ORTHO05D008139 3.4e-14 81.6 78 51.3
A09p32990 Brassica napus HOM05D006717 ORTHO05D008139 4.4e-14 81.3 78 51.3
A09p33020 Brassica napus HOM05D006717 ORTHO05D008139 4.4e-14 81.3 78 51.3
BraA09t38839Z Brassica rapa HOM05D006717 ORTHO05D008139 4.4e-14 81.3 78 51.3
BraA09t38843Z Brassica rapa HOM05D006717 ORTHO05D008139 4.4e-14 81.3 78 51.3
Thhalv10009885m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.4e-14 81.3 75 52.0
BraA09t38827Z Brassica rapa HOM05D006717 ORTHO05D008139 5.7e-14 80.9 78 52.6
Thhalv10009676m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 7.5e-14 80.5 90 45.6
CARHR022290 Cardamine hirsuta HOM05D006717 ORTHO05D008139 9.8e-14 80.1 78 47.4
Thhalv10009544m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 9.8e-14 80.1 78 51.3
AL1G65230 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.7e-13 79.3 52 67.3
BraA09t38828Z Brassica rapa HOM05D006717 ORTHO05D008139 2.2e-13 79.0 78 51.3
CARHR022280 Cardamine hirsuta HOM05D006717 ORTHO05D008139 2.8e-13 78.6 78 50.0
CARHR022210 Cardamine hirsuta HOM05D006717 ORTHO05D008139 3.7e-13 78.2 92 47.8
AT1G21928 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.9e-13 77.8 79 50.6
A09p33000 Brassica napus HOM05D006717 ORTHO05D008139 6.3e-13 77.4 78 50.0
BraA09t38841Z Brassica rapa HOM05D006717 ORTHO05D008139 6.3e-13 77.4 78 50.0
CARHR022850 Cardamine hirsuta HOM05D006717 ORTHO05D008139 8.3e-13 77.0 78 48.7
Aa31LG7G5910 Aethionema arabicum HOM05D006717 ORTHO05D008139 1.1e-12 76.6 78 53.8
BraA09t38825Z Brassica rapa HOM05D006717 ORTHO05D008139 1.1e-12 76.6 78 50.0
CARHR176330 Cardamine hirsuta HOM05D006717 ORTHO05D008139 1.1e-12 76.6 93 46.2
AT1G21925 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.1e-12 75.1 79 49.4
AL1G35060 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 4.1e-12 74.7 91 45.1
BolC6t36416H Brassica oleracea HOM05D006717 ORTHO05D008139 5.4e-12 74.3 78 48.7
C05p20820 Brassica napus HOM05D006717 ORTHO05D008139 7.0e-12 73.9 84 44.0
BolC5t30781H Brassica oleracea HOM05D006717 ORTHO05D008139 7.0e-12 73.9 84 44.0
Thhalv10023052m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 7.0e-12 73.9 95 42.1
Thhalv10009375m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 7.8e-11 70.5 79 46.8
AL1G35030 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.0e-10 70.1 78 44.9
AL1G35130 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 1.0e-10 70.1 96 41.7
BraA09t38840Z Brassica rapa HOM05D006717 ORTHO05D008139 1.7e-10 69.3 65 50.8
Thhalv10022969m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.7e-10 69.3 92 39.1
A05p20110 Brassica napus HOM05D006717 ORTHO05D008139 2.9e-10 68.6 94 40.4
BraA06t26629Z Brassica rapa HOM05D006717 ORTHO05D008139 3.8e-10 68.2 78 44.9
BcaB07g32182 Brassica carinata HOM05D006717 ORTHO05D008139 5.0e-10 67.8 52 48.1
AT1G34795 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.6e-10 67.0 69 43.5
AT1G34810 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.6e-10 67.0 69 43.5
AT1G34815 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.6e-10 67.0 69 43.5
AT1G34830 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 8.6e-10 67.0 69 43.5
Carub.0005s1133 Capsella rubella HOM05D006717 ORTHO05D008139 8.6e-10 67.0 80 46.2
Carub.0001s2141 Capsella rubella HOM05D006717 ORTHO05D008139 1.5e-09 66.2 78 44.9
A06p17920 Brassica napus HOM05D006717 ORTHO05D008139 4.3e-09 64.7 97 40.2
BolC5t32089H Brassica oleracea HOM05D006717 ORTHO05D008139 4.3e-09 64.7 66 48.5
BraA06t24882Z Brassica rapa HOM05D006717 ORTHO05D008139 4.3e-09 64.7 97 40.2
CARHR213610 Cardamine hirsuta HOM05D006717 ORTHO05D008139 5.6e-09 64.3 68 48.5
AT1G34792 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.3e-09 63.9 69 42.0
AT1G34800 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.3e-09 63.9 69 42.0
AT1G34805 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.3e-09 63.9 69 42.0
AT1G34820 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.3e-09 63.9 69 42.0
AT1G34825 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 7.3e-09 63.9 69 42.0
CARHR022300 Cardamine hirsuta HOM05D006717 ORTHO05D008139 7.3e-09 63.9 66 47.0
BcaC05g26104 Brassica carinata HOM05D006717 ORTHO05D008139 9.5e-09 63.5 53 52.8
Thhalv10009471m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 1.2e-08 63.2 65 49.2
Carub.0001s2130 Capsella rubella HOM05D006717 ORTHO05D008139 1.6e-08 62.8 80 42.5
AL1G35270 Arabidopsis lyrata HOM05D006717 ORTHO05D008139 2.8e-08 62.0 68 48.5
AT1G34840 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.6e-08 61.6 66 40.9
AT1G34850 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.6e-08 61.6 66 40.9
AT1G21835 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 4.7e-08 61.2 69 39.1
Thhalv10027078m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.7e-08 61.2 65 50.8
AT1G34860 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 6.1e-08 60.8 68 41.2
Carub.0001s2131 Capsella rubella HOM05D006717 ORTHO05D008139 6.1e-08 60.8 84 44.0
THA.LOC104800186 Tarenaya hassleriana HOM05D006717 ORTHO05D008139 6.1e-08 60.8 92 38.0
BolC1t05874H Brassica oleracea HOM05D006717 ORTHO05D008139 1.0e-07 60.1 95 37.9
BolC1t05876H Brassica oleracea HOM05D006717 ORTHO05D008139 1.0e-07 60.1 95 37.9
BolC3t17915H Brassica oleracea HOM05D006717 ORTHO05D008139 1.4e-07 59.7 95 37.9
BraA01t02119Z Brassica rapa HOM05D006717 ORTHO05D008139 1.4e-07 59.7 95 37.9
A05p37210 Brassica napus HOM05D006717 ORTHO05D008139 2.3e-07 58.9 65 49.2
A07p14420 Brassica napus HOM05D006717 ORTHO05D008139 2.3e-07 58.9 74 40.5
BolC5t30782H Brassica oleracea HOM05D006717 ORTHO05D008139 2.3e-07 58.9 97 38.1
AT1G34930 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 3.0e-07 58.5 68 41.2
A07p14390 Brassica napus HOM05D006717 ORTHO05D008139 4.0e-07 58.2 62 45.2
BraA07t29193Z Brassica rapa HOM05D006717 ORTHO05D008139 4.0e-07 58.2 62 45.2
Thhalv10027249m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 4.0e-07 58.2 66 47.0
A07p14410 Brassica napus HOM05D006717 ORTHO05D008139 5.2e-07 57.8 62 45.2
A09p33010 Brassica napus HOM05D006717 ORTHO05D008139 5.2e-07 57.8 58 51.7
BolC7t42647H Brassica oleracea HOM05D006717 ORTHO05D008139 1.5e-06 56.2 76 38.2
A07p14400 Brassica napus HOM05D006717 ORTHO05D008139 2.0e-06 55.8 62 38.7
BraA07t29194Z Brassica rapa HOM05D006717 ORTHO05D008139 2.0e-06 55.8 62 38.7
Carub.0001s2140 Capsella rubella HOM05D006717 ORTHO05D008139 2.0e-06 55.8 97 33.0
AT1G35035 Arabidopsis thaliana HOM05D006717 ORTHO05D008139 2.6e-06 55.5 78 39.7
BraA10t42559Z Brassica rapa HOM05D006717 ORTHO05D008139 2.6e-06 55.5 95 34.7
Carub.0001s2128 Capsella rubella HOM05D006717 ORTHO05D008139 2.6e-06 55.5 80 40.0
Thhalv10009517m.g Eutrema salsugineum HOM05D006717 ORTHO05D008139 5.7e-06 54.3 67 46.3


User provided reference genes

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