Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G14300 Arabidopsis lyrata HOM05D006620 ORTHO05D008921 9.8e-272 939.5 462 100.0
Carub.0001s0385 Capsella rubella HOM05D006620 ORTHO05D008921 7.1e-262 906.7 462 95.7
AT1G04620 Arabidopsis thaliana HOM05D006620 ORTHO05D008921 4.6e-261 904.0 463 96.3
Thhalv10007576m.g Eutrema salsugineum HOM05D006620 ORTHO05D008921 1.9e-259 898.7 463 95.5
Sp1g03450 Schrenkiella parvula HOM05D006620 ORTHO05D008921 8.1e-258 893.3 463 95.0
BolC5t29064H Brassica oleracea HOM05D006620 ORTHO05D008921 1.5e-256 889.0 465 94.4
CARHR003970 Cardamine hirsuta HOM05D006620 ORTHO05D008921 1.5e-256 889.0 463 94.8
BraA10t42578Z Brassica rapa HOM05D006620 ORTHO05D008921 3.4e-256 887.9 464 94.6
C05p02810 Brassica napus HOM05D006620 ORTHO05D008921 7.6e-256 886.7 466 94.0
A10p03050 Brassica napus HOM05D006620 ORTHO05D008921 5.6e-251 870.5 465 92.3
SpUn0217_0010 Schrenkiella parvula HOM05D006620 ORTHO05D008921 4.4e-248 860.9 440 95.0
THA.LOC104801056 Tarenaya hassleriana HOM05D006620 ORTHO05D008921 5.4e-246 854.0 462 89.6
Cpa.g.sc59.55 Carica papaya HOM05D006620 ORTHO05D008921 1.6e-229 799.3 463 82.9
Atru.chr4.1848 Acer truncatum HOM05D006620 ORTHO05D008921 1.0e-228 796.6 452 84.1
CiPaw.02G103900 Carya illinoinensis HOM05D006620 ORTHO05D008921 3.9e-228 794.7 462 82.5
QL06p022330 Quercus lobata HOM05D006620 ORTHO05D008921 5.1e-228 794.3 463 82.9
TAR365G0583 Trochodendron aralioides HOM05D006620 ORTHO05D008921 8.7e-228 793.5 462 82.3
Ciclev10004924m.g Citrus clementina HOM05D006620 ORTHO05D008921 2.5e-227 792.0 459 84.1
Gohir.A10G119800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 5.6e-227 790.8 441 84.4
GSVIVG01028992001 Vitis vinifera HOM05D006620 ORTHO05D008921 4.8e-226 787.7 455 83.5
Actinidia25091 Actinidia chinensis HOM05D006620 ORTHO05D008921 1.1e-225 786.6 462 82.3
Gohir.D10G146800 Gossypium hirsutum HOM05D006620 ORTHO05D008921 4.0e-225 784.6 433 85.2
Thecc.04G218300 Theobroma cacao HOM05D006620 ORTHO05D008921 5.3e-225 784.3 450 82.2
ClCG05G003790 Citrullus lanatus HOM05D006620 ORTHO05D008921 1.2e-224 783.1 454 82.6
Oeu024839.2 Olea europaea HOM05D006620 ORTHO05D008921 1.2e-224 783.1 462 82.3
RcHm_v2.0_Chr4g0396281 Rosa chinensis HOM05D006620 ORTHO05D008921 1.2e-224 783.1 429 86.9
FvH4_4g05310 Fragaria vesca HOM05D006620 ORTHO05D008921 1.5e-224 782.7 429 86.5
Sopen09g034080 Solanum pennellii HOM05D006620 ORTHO05D008921 5.8e-224 780.8 462 81.2
FAN17G2880 Fragaria x ananassa HOM05D006620 ORTHO05D008921 7.6e-224 780.4 462 81.8
Glyma.10G128400 Glycine max HOM05D006620 ORTHO05D008921 1.0e-223 780.0 461 80.7
CAN.G812.44 Capsicum annuum HOM05D006620 ORTHO05D008921 1.3e-223 779.6 462 80.7
FAN12G0711 Fragaria x ananassa HOM05D006620 ORTHO05D008921 1.3e-223 779.6 463 81.6
VMungo0720G1672 Vigna mungo HOM05D006620 ORTHO05D008921 1.3e-223 779.6 461 81.8
Lj6g0024353 Lotus japonicus HOM05D006620 ORTHO05D008921 2.2e-223 778.9 454 82.4
Manes.15G048100 Manihot esculenta HOM05D006620 ORTHO05D008921 2.9e-223 778.5 465 81.5
CANSAT78G1778 Cannabis sativa HOM05D006620 ORTHO05D008921 8.4e-223 776.9 459 82.1
TWI53G1958 Tripterygium wilfordii HOM05D006620 ORTHO05D008921 8.4e-223 776.9 456 81.4
CSS0026751 Camellia sinensis var. sinensis HOM05D006620 ORTHO05D008921 1.4e-222 776.2 466 80.9
MD13G1227100 Malus domestica HOM05D006620 ORTHO05D008921 1.9e-222 775.8 461 81.3
MELO3C006358.2 Cucumis melo HOM05D006620 ORTHO05D008921 2.5e-222 775.4 443 82.2
SalBow2G2385 Salvia bowleyana HOM05D006620 ORTHO05D008921 4.2e-222 774.6 455 81.3
Sed0017900 Sechium edule HOM05D006620 ORTHO05D008921 5.5e-222 774.2 439 83.4
CsaV3_3G011480 Cucumis sativus L. HOM05D006620 ORTHO05D008921 9.3e-222 773.5 454 81.5
Duzib151G1212 Durio zibethinus HOM05D006620 ORTHO05D008921 9.3e-222 773.5 459 80.0
Lalb_Chr01g0011271 Lupinus albus HOM05D006620 ORTHO05D008921 2.7e-221 771.9 458 81.0
Cc03_g07000 Coffea canephora HOM05D006620 ORTHO05D008921 3.5e-221 771.5 451 81.4
Phvul.007G238800 Phaseolus vulgaris HOM05D006620 ORTHO05D008921 4.6e-221 771.2 438 84.0
PSO764G0126 Papaver somniferum HOM05D006620 ORTHO05D008921 6.0e-221 770.8 454 81.5
Medtr1g046250 Medicago truncatula HOM05D006620 ORTHO05D008921 7.9e-221 770.4 457 81.0
HanXRQChr07g0185841 Helianthus annuus HOM05D006620 ORTHO05D008921 1.3e-220 769.6 451 81.6
Nn1g03061 Nelumbo nucifera HOM05D006620 ORTHO05D008921 1.8e-220 769.2 464 79.5
PGR142G1067 Punica granatum HOM05D006620 ORTHO05D008921 1.8e-220 769.2 430 84.7
FAN07G1877 Fragaria x ananassa HOM05D006620 ORTHO05D008921 2.3e-220 768.8 428 85.7
arahy.Tifrunner.gnm1.ann1.8GH2US Arachis hypogaea HOM05D006620 ORTHO05D008921 3.0e-220 768.5 430 84.2
Migut.G00599 Erythranthe guttata HOM05D006620 ORTHO05D008921 3.9e-220 768.1 448 81.5
Dinv29777 Davidia involucrata HOM05D006620 ORTHO05D008921 6.7e-220 767.3 462 79.9
Hma1.2p1_1241F.1_g269780 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 6.7e-220 767.3 426 84.5
Aqoxy5G00083 Aquilegia oxysepala HOM05D006620 ORTHO05D008921 8.7e-220 766.9 454 80.0
Gorai.011G164100 Gossypium raimondii HOM05D006620 ORTHO05D008921 1.9e-219 765.8 461 80.7
DCAR_002286 Daucus carota HOM05D006620 ORTHO05D008921 2.5e-219 765.4 468 79.5
Lsat_1_v5_gn_6_61660 Lactuca sativa HOM05D006620 ORTHO05D008921 5.7e-219 764.2 427 84.3
Prupe.1G054600 Prunus persica HOM05D006620 ORTHO05D008921 1.6e-218 762.7 429 84.1
SGA_v2.0_scaffold57G20185 Striga asiatica HOM05D006620 ORTHO05D008921 2.8e-218 761.9 449 80.0
Potri.010G062300 Populus trichocarpa HOM05D006620 ORTHO05D008921 1.4e-217 759.6 424 84.4
TPR.G24008 Trifolium pratense HOM05D006620 ORTHO05D008921 1.8e-217 759.2 457 80.7
arahy.Tifrunner.gnm1.ann1.68MQ8I Arachis hypogaea HOM05D006620 ORTHO05D008921 6.9e-217 757.3 480 77.3
PSO832G4215 Papaver somniferum HOM05D006620 ORTHO05D008921 1.2e-216 756.5 461 79.6
ECA233G0386 Erigeron canadensis HOM05D006620 ORTHO05D008921 3.4e-216 755.0 415 84.8
CDE09G0604 Ceratophyllum demersum HOM05D006620 ORTHO05D008921 9.3e-214 746.9 421 82.2
AUR62043860 Chenopodium quinoa HOM05D006620 ORTHO05D008921 1.3e-212 743.0 455 77.6
ATR0787G041 Amborella trichopoda HOM05D006620 ORTHO05D008921 5.1e-212 741.1 457 78.1
unitig_899.g14858 Utricularia gibba HOM05D006620 ORTHO05D008921 7.4e-211 737.3 482 74.7
HPP92_009009 Vanilla planifolia HOM05D006620 ORTHO05D008921 4.8e-210 734.6 445 79.3
COL.COLO4_34324 Corchorus olitorius HOM05D006620 ORTHO05D008921 3.1e-209 731.9 451 78.5
Zm00001eb038650 Zea mays HOM05D006620 ORTHO05D008921 4.5e-208 728.0 423 80.6
Ah.04g153440 Amaranthus hybridus HOM05D006620 ORTHO05D008921 3.8e-207 724.9 433 79.4
Lj3A630T51 Lonicera japonica HOM05D006620 ORTHO05D008921 3.2e-206 721.8 446 78.5
SEGI_36405 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.1e-205 719.2 460 75.2
MBI07_g21064_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D008921 7.9e-205 717.2 401 84.0
Aa31LG1G20250 Aethionema arabicum HOM05D006620 ORTHO05D008921 8.8e-204 713.8 387 90.4
Peaxi162Scf00125g00710 Petunia axillaris HOM05D006620 ORTHO05D008921 8.8e-204 713.8 401 84.3
Pp3c2_21860 Physcomitrium patens HOM05D006620 ORTHO05D008921 2.0e-203 712.6 418 80.4
FAN22G0814 Fragaria x ananassa HOM05D006620 ORTHO05D008921 9.7e-203 710.3 478 74.9
Hund19263 Selenicereus undatus HOM05D006620 ORTHO05D008921 2.8e-202 708.8 425 79.3
AagrBONN_evm.TU.Sc2ySwM_228.367 Anthoceros agrestis HOM05D006620 ORTHO05D008921 4.1e-201 704.9 426 77.2
Mapoly0088s0008 Marchantia polymorpha HOM05D006620 ORTHO05D008921 7.7e-200 700.7 454 74.0
vmacro00524 Vaccinium macrocarpon HOM05D006620 ORTHO05D008921 1.0e-199 700.3 517 69.1
AUR62035902 Chenopodium quinoa HOM05D006620 ORTHO05D008921 4.7e-197 691.4 445 75.1
Cfa014839 Carpinus fangiana HOM05D006620 ORTHO05D008921 2.2e-194 682.6 401 82.3
Rhsim09G0044600 Rhododendron simsii HOM05D006620 ORTHO05D008921 2.8e-194 682.2 451 73.8
Solyc09g091100.4 Solanum lycopersicum HOM05D006620 ORTHO05D008921 5.3e-193 677.9 382 84.0
Nitab4.5_0003287g0030 Nicotiana tabacum HOM05D006620 ORTHO05D008921 1.7e-191 672.9 492 69.3
Sc25g0004890 Simmondsia chinensis HOM05D006620 ORTHO05D008921 2.3e-188 662.5 391 80.8
EL10Ac3g06742 Beta vulgaris HOM05D006620 ORTHO05D008921 4.8e-186 654.8 456 70.4
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 2.4e-185 652.5 561 60.6
CBR_g51515 Chara braunii HOM05D006620 ORTHO05D008921 9.1e-177 624.0 421 69.6
Glyma.20G079901 Glycine max HOM05D006620 ORTHO05D008921 2.0e-176 622.9 357 82.4
AUR62035337 Chenopodium quinoa HOM05D006620 ORTHO05D008921 2.9e-175 619.0 428 71.3
MCO15G577 Micromonas commoda HOM05D006620 ORTHO05D008921 4.7e-165 585.1 437 63.4
Cre11.g468700 Chlamydomonas reinhardtii HOM05D006620 ORTHO05D008921 6.8e-164 581.3 426 65.5
Ca_11784_v3 Cicer arietinum L. HOM05D006620 ORTHO05D008921 2.9e-162 575.9 377 75.6
Cc03_g06790 Coffea canephora HOM05D006620 ORTHO05D008921 4.1e-153 545.4 515 59.0
Os04g0320100 Oryza sativa ssp. japonica HOM05D006620 ORTHO05D008921 1.3e-138 497.3 303 79.2
Haze_11525 Corylus avellana HOM05D006620 ORTHO05D008921 2.4e-137 493.0 271 86.3
PRCOL_00000047 Prasinoderma coloniale HOM05D006620 ORTHO05D008921 2.7e-136 489.6 374 62.0
Psat6g109520 Pisum sativum HOM05D006620 ORTHO05D008921 1.1e-134 484.2 309 77.0
Nitab4.5_0000451g0130 Nicotiana tabacum HOM05D006620 ORTHO05D008921 2.8e-133 479.6 462 56.1
Eucgr.H00112 Eucalyptus grandis HOM05D006620 ORTHO05D008921 3.4e-115 419.5 240 83.3
PGSC0003DMG401011586 Solanum tuberosum HOM05D006620 ORTHO05D008921 1.1e-65 255.0 147 80.3
Prupe.1G054400 Prunus persica HOM05D006620 ORTHO05D008921 4.8e-61 239.6 190 64.2
SEGI_09547 Sequoiadendron giganteum HOM05D006620 ORTHO05D008921 2.5e-57 227.3 147 71.4
Hma1.2p1_1241F.1_g269765 Hydrangea macrophylla HOM05D006620 ORTHO05D008921 1.7e-37 161.4 102 70.6
SEGI_19589 Sequoiadendron giganteum HOM05D006620 ORTHO05D025789 1.9e-28 131.3 79 75.9
Actinidia35928 Actinidia chinensis HOM05D006620 ORTHO05D000073 5.6e-25 119.8 84 67.9
Ca_17765_v3 Cicer arietinum L. HOM05D006620 ORTHO05D044367 1.7e-18 98.2 57 78.9
COL.COLO4_07239 Corchorus olitorius HOM05D006620 ORTHO05D044367 1.4e-15 88.6 49 85.7
MBI11_g39495_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.4e-12 76.6 49 71.4
MBI15_g44046_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 5.4e-12 76.6 42 81.0
MBI12_g00604_MAGBIO Magnolia biondii HOM05D006620 ORTHO05D025789 4.6e-11 73.6 42 76.2
MELO3C028457.2 Cucumis melo HOM05D006620 ORTHO05D167913 1.8e-07 61.6 40 72.5


User provided reference genes

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