Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL1G12400 Arabidopsis lyrata HOM05D007164 ORTHO05D008802 4.5e-264 914.1 471 100.0
Carub.0001s0209 Capsella rubella HOM05D007164 ORTHO05D008802 7.3e-206 720.7 481 79.8
Thhalv10007546m.g Eutrema salsugineum HOM05D007164 ORTHO05D008802 1.6e-192 676.4 483 75.6
Sp1g01950 Schrenkiella parvula HOM05D007164 ORTHO05D008802 9.3e-185 650.6 482 74.3
AT1G02960 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 2.3e-175 619.4 380 86.3
A08p37510 Brassica napus HOM05D007164 ORTHO05D008802 1.3e-167 593.6 484 69.0
BraA08t35648Z Brassica rapa HOM05D007164 ORTHO05D008802 4.8e-165 585.1 476 68.7
C08p00350 Brassica napus HOM05D007164 ORTHO05D008802 3.8e-162 575.5 459 68.6
BolC8t46836H Brassica oleracea HOM05D007164 ORTHO05D008802 3.0e-159 565.8 465 67.7
BcaB03g13496 Brassica carinata HOM05D007164 ORTHO05D008802 6.9e-156 554.7 489 64.4
BcaC07g36981 Brassica carinata HOM05D007164 ORTHO05D008802 4.8e-149 531.9 473 62.8
THA.LOC104825977 Tarenaya hassleriana HOM05D007164 ORTHO05D008802 4.8e-133 478.8 480 56.5
Aa31LG1G9610 Aethionema arabicum HOM05D007164 ORTHO05D008802 4.9e-117 425.6 473 54.3
CARHR002290 Cardamine hirsuta HOM05D007164 ORTHO05D008802 1.1e-95 354.8 219 83.1
Manes.01G216000 Manihot esculenta HOM05D007164 ORTHO05D008802 4.9e-53 213.0 517 33.1
TWI23G0507 Tripterygium wilfordii HOM05D007164 ORTHO05D008802 1.0e-50 205.3 516 32.9
Cpa.g.sc9.198 Carica papaya HOM05D007164 ORTHO05D008802 2.5e-49 200.7 478 32.0
Duzib138G1086 Durio zibethinus HOM05D007164 ORTHO05D008802 1.6e-43 181.4 509 29.3
QL12p030187 Quercus lobata HOM05D007164 ORTHO05D008802 2.7e-43 180.6 500 31.0
Gorai.004G088600 Gossypium raimondii HOM05D007164 ORTHO05D008802 6.7e-42 176.0 513 29.8
Thecc.01G295000 Theobroma cacao HOM05D007164 ORTHO05D008802 6.9e-39 166.0 518 30.1
Sabra02G0151300 Salix brachista HOM05D007164 ORTHO05D008802 1.2e-38 165.2 555 27.9
Potri.002G208058 Populus trichocarpa HOM05D007164 ORTHO05D008802 4.5e-38 163.3 493 28.4
Gohir.A08G075000 Gossypium hirsutum HOM05D007164 ORTHO05D008802 2.9e-37 160.6 390 31.0
Gohir.D08G084100 Gossypium hirsutum HOM05D007164 ORTHO05D008802 3.8e-37 160.2 501 29.9
Actinidia24839 Actinidia chinensis HOM05D007164 ORTHO05D008802 3.2e-36 157.1 503 29.6
Lj2A1189G41 Lonicera japonica HOM05D007164 ORTHO05D008802 7.2e-36 156.0 417 31.2
Prupe.8G256400 Prunus persica HOM05D007164 ORTHO05D008802 9.4e-36 155.6 387 32.8
COL.COLO4_23399 Corchorus olitorius HOM05D007164 ORTHO05D008802 1.6e-35 154.8 481 29.3
HanXRQChr10g0283971 Helianthus annuus HOM05D007164 ORTHO05D008802 4.7e-35 153.3 507 27.4
Rhsim01G0283000 Rhododendron simsii HOM05D007164 ORTHO05D008802 4.7e-35 153.3 491 29.7
Dinv33025 Davidia involucrata HOM05D007164 ORTHO05D008802 6.7e-34 149.4 450 31.3
MD03G1283300 Malus domestica HOM05D007164 ORTHO05D008802 1.5e-33 148.3 494 30.6
CANSAT25G0358 Cannabis sativa HOM05D007164 ORTHO05D008802 2.0e-33 147.9 513 29.2
Atru.chr5.1222 Acer truncatum HOM05D007164 ORTHO05D008802 5.7e-33 146.4 343 32.9
Eucgr.K03454 Eucalyptus grandis HOM05D007164 ORTHO05D008802 5.7e-33 146.4 514 28.4
Sabra02G0151900 Salix brachista HOM05D007164 ORTHO05D008802 9.7e-33 145.6 570 26.7
TPR.G27420 Trifolium pratense HOM05D007164 ORTHO05D008802 9.7e-33 145.6 420 30.2
Lj6g0003922 Lotus japonicus HOM05D007164 ORTHO05D008802 1.7e-32 144.8 494 30.6
RcHm_v2.0_Chr6g0293271 Rosa chinensis HOM05D007164 ORTHO05D008802 3.1e-31 140.6 503 28.8
CiPaw.07G104500 Carya illinoinensis HOM05D007164 ORTHO05D008802 3.5e-30 137.1 235 37.4
ECA247G0548 Erigeron canadensis HOM05D002562 ORTHO05D002808 4.5e-30 136.7 494 28.1
FAN20G2954 Fragaria x ananassa HOM05D007164 ORTHO05D008802 4.5e-30 136.7 509 27.1
Sed0021441 Sechium edule HOM05D007164 ORTHO05D008802 5.0e-29 133.3 474 29.1
FAN24G2541 Fragaria x ananassa HOM05D007164 ORTHO05D008802 8.5e-29 132.5 516 26.9
Aqoxy2G03039 Aquilegia oxysepala HOM05D007164 ORTHO05D008802 1.1e-28 132.1 374 28.3
ClCG05G010410 Citrullus lanatus HOM05D007164 ORTHO05D008802 2.5e-28 131.0 484 28.1
arahy.Tifrunner.gnm1.ann1.JK4YNR Arachis hypogaea HOM05D007164 ORTHO05D008802 7.2e-28 129.4 497 29.4
Lalb_Chr18g0047211 Lupinus albus HOM05D007164 ORTHO05D008802 1.2e-27 128.6 492 29.9
Haze_04871 Corylus avellana HOM05D007164 ORTHO05D008802 2.7e-27 127.5 312 33.3
TAR636G2054 Trochodendron aralioides HOM05D007164 ORTHO05D008802 2.7e-27 127.5 516 25.8
arahy.Tifrunner.gnm1.ann1.94G738 Arachis hypogaea HOM05D007164 ORTHO05D008802 8.0e-27 125.9 350 32.6
Medtr3g082270 Medicago truncatula HOM05D007164 ORTHO05D008802 8.0e-27 125.9 488 27.3
Phvul.007G122524 Phaseolus vulgaris HOM05D007164 ORTHO05D008802 1.4e-26 125.2 471 28.5
Psat5g105520 Pisum sativum HOM05D007164 ORTHO05D008802 1.4e-26 125.2 500 26.8
vmacro14990 Vaccinium macrocarpon HOM05D007164 ORTHO05D008802 6.7e-26 122.9 490 26.9
BcaB06g26239 Brassica carinata HOM05D007164 ORTHO05D008802 8.8e-26 122.5 101 62.4
FAN27G1449 Fragaria x ananassa HOM05D007164 ORTHO05D008802 2.4e-23 114.4 258 30.6
GSVIVG01010946001 Vitis vinifera HOM05D007164 ORTHO05D008802 4.1e-23 113.6 264 33.7
CsaV3_3G018070 Cucumis sativus L. HOM05D007164 ORTHO05D008802 7.0e-23 112.8 333 29.7
arahy.Tifrunner.gnm1.ann1.PB1NMW Arachis hypogaea HOM05D007164 ORTHO05D008802 2.0e-22 111.3 315 32.1
Ah.15g093880 Amaranthus hybridus HOM05D007164 ORTHO05D008802 3.5e-22 110.5 219 31.1
Glyma.13G007800 Glycine max HOM05D007164 ORTHO05D008802 3.5e-22 110.5 490 27.1
SGA_v2.0_scaffold2G01414 Striga asiatica HOM05D007164 ORTHO05D008802 3.5e-22 110.5 403 29.3
Carub.0033s0003 Capsella rubella HOM05D003036 ORTHO05D008712 2.2e-21 107.8 79 74.7
AUR62033184 Chenopodium quinoa HOM05D007164 ORTHO05D008802 1.5e-20 105.1 510 24.1
MSTRG.21615 Avicennia marina HOM05D007164 ORTHO05D008802 5.5e-20 103.2 356 27.2
Sc17g0003330 Simmondsia chinensis HOM05D007164 ORTHO05D008802 5.5e-20 103.2 466 27.0
Ciclev10017702m.g Citrus clementina HOM05D007164 ORTHO05D008802 1.2e-19 102.1 253 32.8
PGR044G2041 Punica granatum HOM05D007164 ORTHO05D008802 3.6e-19 100.5 191 31.4
Sopen09g029680 Solanum pennellii HOM05D007164 ORTHO05D008802 3.0e-18 97.4 522 24.9
Lsat_1_v5_gn_9_3101 Lactuca sativa HOM05D007164 ORTHO05D008802 4.0e-18 97.1 166 34.3
AUR62008594 Chenopodium quinoa HOM05D007164 ORTHO05D008802 8.8e-18 95.9 197 31.5
Zm00001eb252420 Zea mays HOM05D007164 ORTHO05D008802 2.6e-17 94.4 195 30.3
BcaB06g26240 Brassica carinata HOM05D007164 ORTHO05D008802 3.4e-17 94.0 179 39.7
Oeu047459.1 Olea europaea HOM05D007164 ORTHO05D008802 4.4e-17 93.6 167 34.1
FvH4_2g25160 Fragaria vesca HOM05D007164 ORTHO05D008802 5.7e-17 93.2 441 25.9
ATR0053G018 Amborella trichopoda HOM05D007164 ORTHO05D008802 2.2e-16 91.3 336 28.6
AT1G02965 Arabidopsis thaliana HOM05D007164 ORTHO05D008802 4.8e-16 90.1 60 76.7
Cc11_g02370 Coffea canephora HOM05D007164 ORTHO05D008802 3.1e-15 87.4 389 24.9
HanXRQChr10g0283981 Helianthus annuus HOM05D007164 ORTHO05D008802 4.1e-15 87.0 92 41.3
PGSC0003DMG401011367 Solanum tuberosum HOM05D007164 ORTHO05D008802 5.4e-15 86.7 382 26.7
unitig_0.g652 Utricularia gibba HOM05D007164 ORTHO05D008802 7.0e-15 86.3 162 33.3
SalBow3G2762 Salvia bowleyana HOM05D007164 ORTHO05D008802 7.7e-14 82.8 426 26.1
MBI16_g23765_MAGBIO Magnolia biondii HOM05D007164 ORTHO05D008802 1.7e-13 81.6 338 26.3
HPP92_027362 Vanilla planifolia HOM05D007164 ORTHO05D008802 1.7e-13 81.6 132 31.1
ATR0691G271 Amborella trichopoda HOM05D007164 ORTHO05D008802 9.4e-12 75.9 168 28.6
Oeu047456.1 Olea europaea HOM05D007164 ORTHO05D008802 1.6e-11 75.1 364 27.7
Migut.D00187 Erythranthe guttata HOM05D007164 ORTHO05D008802 1.4e-10 72.0 387 25.6
Hund18121 Selenicereus undatus HOM05D007164 ORTHO05D008802 1.4e-10 72.0 284 27.1
PGR044G2559 Punica granatum HOM05D007164 ORTHO05D008802 2.3e-10 71.2 201 28.9
SEGI_29739 Sequoiadendron giganteum HOM05D007164 ORTHO05D008802 1.5e-09 68.6 103 29.1
AagrBONN_evm.TU.Sc2ySwM_117.3923 Anthoceros agrestis HOM05D007164 ORTHO05D008802 1.3e-08 65.5 200 26.5
Pp3c3_15490 Physcomitrium patens HOM05D007164 ORTHO05D008802 2.2e-08 64.7 120 25.8
VMungo0540G1256 Vigna mungo HOM05D007164 ORTHO05D008802 3.7e-08 63.9 103 40.8
Nitab4.5_0005474g0060 Nicotiana tabacum HOM05D000498 ORTHO05D000354 5.4e-07 60.1 503 24.7
Solyc09g074840.4 Solanum lycopersicum HOM05D007164 ORTHO05D008802 7.0e-07 59.7 452 24.3
Ca_07266_v3 Cicer arietinum L. HOM05D007164 ORTHO05D008802 1.2e-06 58.9 183 29.0
Nitab4.5_0009457g0020 Nicotiana tabacum HOM05D007164 ORTHO05D008802 3.5e-06 57.4 476 24.4
CSS0046769 Camellia sinensis var. sinensis HOM05D007164 ORTHO05D008802 5.9e-06 56.6 298 24.2


User provided reference genes

Program Settings