Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A10p28360 Brassica napus HOM05D008408 ORTHO05D009173 3.6e-44 181.0 81 100.0
BraA10t44883Z Brassica rapa HOM05D008408 ORTHO05D009173 1.4e-43 179.1 81 98.8
C09p68620 Brassica napus HOM05D008408 ORTHO05D009173 1.5e-42 175.6 81 96.3
BolC9t59606H Brassica oleracea HOM05D008408 ORTHO05D009173 4.4e-42 174.1 81 95.1
BcaB08g37265 Brassica carinata HOM05D008408 ORTHO05D009173 4.1e-40 167.5 81 90.1
Carub.0008s0682 Capsella rubella HOM05D008408 ORTHO05D009173 7.0e-32 140.2 82 73.2
AT5G08055 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 4.3e-29 131.0 82 68.3
AT5G08315 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 9.5e-29 129.8 83 71.1
C02p03510 Brassica napus HOM05D008408 ORTHO05D009173 4.7e-28 127.5 81 70.4
BolC2t06310H Brassica oleracea HOM05D008408 ORTHO05D009173 4.7e-28 127.5 81 70.4
THA.LOC104807177 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 3.4e-26 121.3 82 68.3
Thhalv10001718m.g Eutrema salsugineum HOM05D008408 ORTHO05D009173 4.4e-26 120.9 79 68.4
THA.LOC104807176 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 7.5e-26 120.2 82 65.9
AL6G18730 Arabidopsis lyrata HOM05D008408 ORTHO05D009173 1.3e-25 119.4 82 65.9
C02p03520 Brassica napus HOM05D008408 ORTHO05D009173 1.7e-25 119.0 81 65.4
BolC2t06311H Brassica oleracea HOM05D008408 ORTHO05D009173 1.7e-25 119.0 81 65.4
BraA02t04950Z Brassica rapa HOM05D008408 ORTHO05D009173 3.7e-25 117.9 81 65.4
AT1G33607 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 1.4e-24 115.9 82 63.4
THA.LOC109116531 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 7.0e-24 113.6 80 65.0
THA.LOC109116535 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 2.0e-23 112.1 83 62.7
BcaC03g13221 Brassica carinata HOM05D008408 ORTHO05D009173 5.9e-23 110.5 85 61.2
THA.LOC109116906 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 5.9e-23 110.5 83 61.4
Carub.0008s0683 Capsella rubella HOM05D008408 ORTHO05D009173 1.3e-22 109.4 82 62.2
Sp4g25680 Schrenkiella parvula HOM05D008408 ORTHO05D009173 3.0e-22 108.2 84 63.1
THA.LOC109116863 Tarenaya hassleriana HOM05D008408 ORTHO05D009173 6.6e-22 107.1 82 59.8
AT5G19315 Arabidopsis thaliana HOM05D008408 ORTHO05D009173 8.6e-22 106.7 81 63.0
CARHR193650 Cardamine hirsuta HOM05D008408 ORTHO05D009173 8.0e-20 100.1 79 58.2
Carub.0006s1765 Capsella rubella HOM05D008408 ORTHO05D009173 1.1e-19 99.8 79 58.2
BNapus_Darmor_BZH_scaffold_38p02640 Brassica napus HOM05D008408 ORTHO05D009173 1.4e-19 99.4 80 55.0
A02p05470 Brassica napus HOM05D008408 ORTHO05D009173 4.0e-19 97.8 80 55.0
BraA02t05498Z Brassica rapa HOM05D008408 ORTHO05D009173 4.0e-19 97.8 80 55.0
CARHR138690 Cardamine hirsuta HOM05D008408 ORTHO05D009173 5.2e-19 97.4 83 60.2
AL6G30800 Arabidopsis lyrata HOM05D008408 ORTHO05D009173 8.9e-19 96.7 80 57.5
BcaC03g13220 Brassica carinata HOM05D008408 ORTHO05D009173 8.9e-19 96.7 64 68.8
Aa31LG11G10380 Aethionema arabicum HOM05D008408 ORTHO05D009173 2.2e-17 92.0 77 54.5
Aa31LG11G10370 Aethionema arabicum HOM05D008408 ORTHO05D009173 2.3e-14 82.0 81 49.4
Thecc.01G234600 Theobroma cacao HOM05D008282 ORTHO05D009173 1.6e-12 75.9 88 47.7
CARHR225690 Cardamine hirsuta HOM05D008408 ORTHO05D009173 8.1e-12 73.6 81 44.4
Thhalv10026696m.g Eutrema salsugineum HOM05D008408 ORTHO05D009173 6.8e-11 70.5 90 41.1
Thecc.01G205100 Theobroma cacao HOM05D008282 ORTHO05D009173 8.9e-11 70.1 88 42.0
AL7G35410 Arabidopsis lyrata HOM05D008408 ORTHO05D009173 1.5e-10 69.3 81 40.7
A01p10130 Brassica napus HOM05D008408 ORTHO05D009173 7.5e-10 67.0 82 45.1
BraA01t00959Z Brassica rapa HOM05D008408 ORTHO05D009173 7.5e-10 67.0 82 45.1
Aa31LG11G10360 Aethionema arabicum HOM05D008408 ORTHO05D009173 1.3e-09 66.2 78 43.6
Duzib138G1397 Durio zibethinus HOM05D008282 ORTHO05D009173 2.2e-09 65.5 88 42.0
Sp6g27730 Schrenkiella parvula HOM05D008408 ORTHO05D016591 2.9e-09 65.1 52 50.0
Potri.016G130300 Populus trichocarpa HOM05D008282 ORTHO05D009173 4.9e-09 64.3 87 41.4
BcaNung00027 Brassica carinata HOM05D008408 ORTHO05D009173 6.4e-09 63.9 90 38.9
Duzib138G1943 Durio zibethinus HOM05D008282 ORTHO05D009173 6.4e-09 63.9 88 42.0
Potri.013G113550 Populus trichocarpa HOM05D008282 ORTHO05D009173 1.1e-08 63.2 87 40.2
BcaNung02676 Brassica carinata HOM05D029055 ORTHO05D009173 5.4e-08 60.8 92 38.0
C07p50000 Brassica napus HOM05D029055 ORTHO05D009173 5.4e-08 60.8 92 38.0
Carub.0006s1465 Capsella rubella HOM05D008408 ORTHO05D016591 9.2e-08 60.1 89 38.2
CSS0031071 Camellia sinensis var. sinensis HOM05D008282 ORTHO05D009173 1.6e-07 59.3 61 49.2
Gorai.005G072400 Gossypium raimondii HOM05D008282 ORTHO05D009173 1.6e-07 59.3 55 47.3
Gohir.D02G064075 Gossypium hirsutum HOM05D008282 ORTHO05D009173 3.5e-07 58.2 58 48.3
Duzib138G0497 Durio zibethinus HOM05D008282 ORTHO05D009173 6.0e-07 57.4 89 39.3
A02p03530 Brassica napus HOM05D008408 ORTHO05D016591 2.3e-06 55.5 53 41.5
BraA02t05324Z Brassica rapa HOM05D008408 ORTHO05D016591 2.3e-06 55.5 53 41.5
C02p08350 Brassica napus HOM05D008408 ORTHO05D016591 8.6e-06 53.5 53 39.6


User provided reference genes

Program Settings