Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p60900 Brassica napus HOM05D007250 ORTHO05D009162 2.7e-152 542.0 276 100.0
BraA09t41463Z Brassica rapa HOM05D007250 ORTHO05D009162 1.0e-151 540.0 276 99.6
C08p44490 Brassica napus HOM05D007250 ORTHO05D009162 9.7e-142 506.9 276 93.5
BolC8t51991H Brassica oleracea HOM05D007250 ORTHO05D009162 1.7e-138 496.1 286 89.5
Thhalv10008448m.g Eutrema salsugineum HOM05D007250 ORTHO05D009162 8.0e-128 460.7 276 85.5
Sp1g14600 Schrenkiella parvula HOM05D007250 ORTHO05D009162 3.0e-127 458.8 276 84.4
Carub.0001s1619 Capsella rubella HOM05D007250 ORTHO05D009162 3.7e-125 451.8 276 84.8
CARHR016920 Cardamine hirsuta HOM05D007250 ORTHO05D009162 4.8e-125 451.4 274 84.7
AL1G28580 Arabidopsis lyrata HOM05D007250 ORTHO05D009162 5.4e-124 448.0 276 84.1
AT1G16445 Arabidopsis thaliana HOM05D007250 ORTHO05D009162 6.1e-120 434.5 276 81.5
Aa31LG7G990 Aethionema arabicum HOM05D007250 ORTHO05D009162 1.6e-104 383.3 280 72.9
Duzib213G0161 Durio zibethinus HOM05D007250 ORTHO05D009162 1.6e-83 313.5 274 61.7
Ciclev10005586m.g Citrus clementina HOM05D007250 ORTHO05D009162 3.0e-82 309.3 266 59.8
Glyma.15G260800 Glycine max HOM05D007250 ORTHO05D009162 3.0e-82 309.3 219 66.2
Thecc.07G179900 Theobroma cacao HOM05D007250 ORTHO05D009162 2.5e-81 306.2 243 63.4
Lj3g0020784 Lotus japonicus HOM05D007250 ORTHO05D009162 9.6e-81 304.3 219 65.8
Medtr1g060720 Medicago truncatula HOM05D007250 ORTHO05D009162 9.6e-81 304.3 217 65.9
Phvul.005G050100 Phaseolus vulgaris HOM05D007250 ORTHO05D009162 9.6e-81 304.3 223 64.6
Sabra07G0056900 Salix brachista HOM05D007250 ORTHO05D009162 9.6e-81 304.3 209 70.3
Gorai.013G142400 Gossypium raimondii HOM05D007250 ORTHO05D009162 6.2e-80 301.6 208 69.7
Manes.06G175800 Manihot esculenta HOM05D007250 ORTHO05D009162 6.2e-80 301.6 257 59.1
QL04p088484 Quercus lobata HOM05D007250 ORTHO05D009162 1.8e-79 300.1 220 67.3
QL04p088943 Quercus lobata HOM05D007250 ORTHO05D009162 1.8e-79 300.1 220 67.3
Potri.007G069400 Populus trichocarpa HOM05D007250 ORTHO05D009162 2.4e-79 299.7 209 69.9
ClCG02G018630 Citrullus lanatus HOM05D007250 ORTHO05D009162 9.0e-79 297.7 207 68.1
Gohir.D13G127200 Gossypium hirsutum HOM05D007250 ORTHO05D009162 1.2e-78 297.4 221 66.5
Ca_03591_v3 Cicer arietinum L. HOM05D007250 ORTHO05D009162 2.0e-78 296.6 219 63.0
GSVIVG01036780001 Vitis vinifera HOM05D007250 ORTHO05D009162 9.9e-78 294.3 264 56.4
Lalb_Chr25g0284601 Lupinus albus HOM05D007250 ORTHO05D009162 2.2e-77 293.1 221 62.4
Actinidia12769 Actinidia chinensis HOM05D007250 ORTHO05D000003 2.4e-76 289.7 222 63.1
Eucgr.F04459 Eucalyptus grandis HOM05D007250 ORTHO05D009162 4.2e-76 288.9 223 63.2
CSS0017513 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 5.4e-76 288.5 211 64.5
vmacro11701 Vaccinium macrocarpon HOM05D007250 ORTHO05D009162 9.3e-76 287.7 230 61.3
CsaV3_6G013550 Cucumis sativus L. HOM05D007250 ORTHO05D009162 1.6e-75 287.0 248 59.7
Haze_07815 Corylus avellana HOM05D007250 ORTHO05D009162 2.1e-75 286.6 223 63.2
Nitab4.5_0003777g0030 Nicotiana tabacum HOM05D007250 ORTHO05D009162 2.7e-75 286.2 235 61.7
Hma1.2p1_0151F.1_g067310 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 3.5e-75 285.8 206 67.0
CiPaw.11G061700 Carya illinoinensis HOM05D007250 ORTHO05D009162 7.8e-75 284.6 244 57.0
AUR62018167 Chenopodium quinoa HOM05D007250 ORTHO05D009162 1.0e-74 284.3 252 57.1
TWI38G0063 Tripterygium wilfordii HOM05D007250 ORTHO05D009162 2.3e-74 283.1 222 61.7
Sed0012120 Sechium edule HOM05D007250 ORTHO05D009162 8.7e-74 281.2 247 57.9
CAN.G492.76 Capsicum annuum HOM05D007250 ORTHO05D009162 1.1e-73 280.8 223 62.3
CSS0024774 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 1.5e-73 280.4 221 62.4
Lj2A15T78 Lonicera japonica HOM05D007250 ORTHO05D009162 2.5e-73 279.6 203 64.5
Nn3g20174 Nelumbo nucifera HOM05D007250 ORTHO05D009162 2.5e-73 279.6 257 52.9
Solyc10g005540.4 Solanum lycopersicum HOM05D007250 ORTHO05D009162 2.5e-73 279.6 220 64.1
Sopen10g001520 Solanum pennellii HOM05D007250 ORTHO05D009162 4.3e-73 278.9 220 64.1
Nitab4.5_0008957g0010 Nicotiana tabacum HOM05D007250 ORTHO05D009162 5.6e-73 278.5 235 60.9
Peaxi162Scf00114g00116 Petunia axillaris HOM05D007250 ORTHO05D009162 9.6e-73 277.7 238 59.7
Dinv19589 Davidia involucrata HOM05D007250 ORTHO05D009162 1.3e-72 277.3 196 68.4
MSTRG.16100 Avicennia marina HOM05D007250 ORTHO05D009162 2.8e-72 276.2 239 56.9
HanXRQChr05g0160551 Helianthus annuus HOM05D007250 ORTHO05D009162 2.8e-72 276.2 238 56.3
Rhsim06G0242100 Rhododendron simsii HOM05D007250 ORTHO05D009162 2.8e-72 276.2 253 55.3
PGSC0003DMG400011276 Solanum tuberosum HOM05D007250 ORTHO05D009162 4.8e-72 275.4 241 60.2
CANSAT56G4154 Cannabis sativa HOM05D007250 ORTHO05D009162 1.4e-71 273.9 251 54.2
PSO541G5100 Papaver somniferum HOM05D007250 ORTHO05D009162 3.1e-71 272.7 250 53.2
RcHm_v2.0_Chr6g0272151 Rosa chinensis HOM05D007250 ORTHO05D009162 4.0e-71 272.3 216 60.6
Oeu034977.1 Olea europaea HOM05D007250 ORTHO05D009162 5.3e-71 271.9 243 56.4
FvH4_2g12161 Fragaria vesca HOM05D007250 ORTHO05D009162 6.9e-71 271.6 225 59.1
MD05G1040700 Malus domestica HOM05D007250 ORTHO05D009162 1.5e-70 270.4 264 54.5
CDE01G0022 Ceratophyllum demersum HOM05D007250 ORTHO05D009162 2.0e-70 270.0 205 62.4
Atru.chr1.107 Acer truncatum HOM05D007250 ORTHO05D009162 1.3e-69 267.3 213 62.0
Lsat_1_v5_gn_7_75520 Lactuca sativa HOM05D007250 ORTHO05D009162 2.2e-69 266.5 266 52.3
Os05g0511700 Oryza sativa ssp. japonica HOM05D007250 ORTHO05D009162 2.2e-69 266.5 228 57.0
unitig_748.g7850 Utricularia gibba HOM05D007250 ORTHO05D001497 9.3e-68 261.2 212 58.0
Zm00001eb292510 Zea mays HOM05D007250 ORTHO05D009162 1.0e-66 257.7 253 54.5
arahy.Tifrunner.gnm1.ann1.QIZU11 Arachis hypogaea HOM05D007250 ORTHO05D009162 1.8e-66 256.9 183 65.6
MBI18_g10574_MAGBIO Magnolia biondii HOM05D007250 ORTHO05D009162 5.1e-66 255.4 183 66.7
AUR62042431 Chenopodium quinoa HOM05D007250 ORTHO05D009162 6.7e-66 255.0 236 54.7
Psat1g013800 Pisum sativum HOM05D007250 ORTHO05D009162 9.6e-65 251.1 194 63.4
ATR0165G048 Amborella trichopoda HOM05D007250 ORTHO05D009162 3.7e-64 249.2 229 53.3
Gohir.A13G123300 Gossypium hirsutum HOM05D007250 ORTHO05D009162 3.1e-63 246.1 292 49.3
Hund20100 Selenicereus undatus HOM05D007250 ORTHO05D009162 2.9e-61 239.6 172 66.9
COL.COLO4_32252 Corchorus olitorius HOM05D007250 ORTHO05D009162 4.2e-60 235.7 221 58.4
Aqoxy6G01374 Aquilegia oxysepala HOM05D007250 ORTHO05D009162 1.2e-59 234.2 260 48.1
arahy.Tifrunner.gnm1.ann1.3NS56Y Arachis hypogaea HOM05D007250 ORTHO05D009162 2.1e-59 233.4 203 58.6
HPP92_000965 Vanilla planifolia HOM05D007250 ORTHO05D009162 3.5e-59 232.6 212 53.8
Prupe.8G055300 Prunus persica HOM05D007250 ORTHO05D009162 4.6e-59 232.3 231 52.8
TAR627G0140 Trochodendron aralioides HOM05D007250 ORTHO05D009162 9.6e-57 224.6 235 51.1
Pp3c16_19260 Physcomitrium patens HOM05D007250 ORTHO05D009162 6.9e-55 218.4 197 53.3
SGA_v2.0_scaffold7G03608 Striga asiatica HOM05D001395 ORTHO05D002039 2.6e-54 216.5 223 50.7
FAN20G1272 Fragaria x ananassa HOM05D007250 ORTHO05D009162 4.9e-53 212.2 228 51.3
EL10Ac2g03263 Beta vulgaris HOM05D007250 ORTHO05D009162 1.9e-52 210.3 275 43.3
Cpa.g.sc34.15 Carica papaya HOM05D007250 ORTHO05D009162 1.6e-51 207.2 188 58.5
Mapoly0102s0005 Marchantia polymorpha HOM05D007250 ORTHO05D009162 7.9e-51 204.9 281 40.2
AagrBONN_evm.TU.Sc2ySwM_117.37 Anthoceros agrestis HOM05D007250 ORTHO05D009162 1.1e-47 194.5 233 45.1
Cc05_g16330 Coffea canephora HOM05D007250 ORTHO05D009162 1.4e-47 194.1 140 64.3
Hma1.2p1_0151F.1_g067320 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 9.0e-47 191.4 143 65.0
SMO141G0022 Selaginella moellendorffii HOM05D007250 ORTHO05D009162 7.7e-46 188.3 187 48.1
PGR031G0704 Punica granatum HOM05D007250 ORTHO05D009162 3.2e-44 183.0 245 44.1
Hma1.2p1_0616F.1_g189960 Hydrangea macrophylla HOM05D007250 ORTHO05D009162 5.0e-37 159.1 218 42.7
Migut.M01530 Erythranthe guttata HOM05D007250 ORTHO05D009162 1.6e-35 154.1 110 62.7
SEGI_10655 Sequoiadendron giganteum HOM05D007250 ORTHO05D009162 2.6e-30 136.7 104 61.5
CBR_g32272 Chara braunii HOM05D007250 ORTHO05D009162 3.5e-30 136.3 146 46.6
MCO03G414 Micromonas commoda HOM05D007250 ORTHO05D009162 6.5e-29 132.1 212 37.7
Cre12.g517550 Chlamydomonas reinhardtii HOM05D007250 ORTHO05D009162 1.6e-27 127.5 169 42.0
FAN24G3506 Fragaria x ananassa HOM05D007250 ORTHO05D009162 3.7e-24 116.3 99 56.6
QL03p068942 Quercus lobata HOM05D007250 ORTHO05D009162 3.5e-22 109.8 210 37.6
Migut.M01529 Erythranthe guttata HOM05D007250 ORTHO05D009162 1.1e-20 104.8 87 58.6
CSS0048664 Camellia sinensis var. sinensis HOM05D007250 ORTHO05D009162 3.2e-20 103.2 102 52.0
Sc10g0008800 Simmondsia chinensis HOM05D007250 ORTHO05D009162 1.5e-17 94.4 82 56.1
PRCOL_00005754 Prasinoderma coloniale HOM05D007250 ORTHO05D009162 3.1e-15 86.7 202 28.7
MELO3C019639.2 Cucumis melo HOM05D007250 ORTHO05D009162 1.5e-09 67.8 40 72.5
Mapoly0062s0100 Marchantia polymorpha HOM05D007250 ORTHO05D009162 4.8e-08 62.8 80 38.8
VMungo1080G0363 Vigna mungo HOM05D007250 ORTHO05D009162 1.4e-07 61.2 40 57.5
QL04p088027 Quercus lobata HOM05D037085 ORTHO05D009162 4.1e-07 59.7 54 51.9


User provided reference genes

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