Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A09p33650 Brassica napus HOM05D007324 ORTHO05D007884 2.4e-45 185.7 134 100.0
BcaB07g32955 Brassica carinata HOM05D007324 ORTHO05D007884 3.7e-38 161.8 134 85.1
BolC5t31929H Brassica oleracea HOM05D007324 ORTHO05D007884 9.2e-37 157.1 135 77.8
C05p32030 Brassica napus HOM05D007324 ORTHO05D007884 3.9e-35 151.8 135 76.3
C05p32110 Brassica napus HOM05D007324 ORTHO05D007884 6.6e-35 151.0 134 64.2
BolC5t31940H Brassica oleracea HOM05D007324 ORTHO05D007884 6.6e-35 151.0 134 64.2
Thhalv10009848m.g Eutrema salsugineum HOM05D007324 ORTHO05D007884 3.1e-32 142.1 115 65.2
Sp1g28340 Schrenkiella parvula HOM05D007324 ORTHO05D007884 8.9e-32 140.6 134 79.1
BcaB04g17953 Brassica carinata HOM05D007324 ORTHO05D007884 6.2e-25 117.9 114 59.6
BolC8t47935H Brassica oleracea HOM05D007324 ORTHO05D007884 1.8e-24 116.3 114 55.3
Aa31LG2G13400 Aethionema arabicum HOM05D007324 ORTHO05D007884 8.9e-24 114.0 115 68.7
A08p09020 Brassica napus HOM05D007324 ORTHO05D007884 4.1e-21 105.1 100 55.0
BraA08t32903Z Brassica rapa HOM05D007324 ORTHO05D007884 4.1e-21 105.1 100 55.0
BcaC05g27297 Brassica carinata HOM05D007324 ORTHO05D007884 1.2e-20 103.6 134 59.0
AL1G46810 Arabidopsis lyrata HOM05D007324 ORTHO05D007884 1.3e-19 100.1 115 68.7
AL1G48030 Arabidopsis lyrata HOM05D007324 ORTHO05D007884 9.5e-18 94.0 105 62.9
CARHR032010 Cardamine hirsuta HOM05D007324 ORTHO05D007884 2.8e-17 92.4 116 61.2
PGR042G1904 Punica granatum HOM05D007324 ORTHO05D007884 2.4e-08 62.8 95 44.2
Glyma.17G155000 Glycine max HOM05D007324 ORTHO05D007884 5.2e-08 61.6 113 37.2
Ciclev10033018m.g Citrus clementina HOM05D007324 ORTHO05D007884 1.5e-07 60.1 119 38.7
GSVIVG01013196001 Vitis vinifera HOM05D007324 ORTHO05D007884 2.6e-07 59.3 107 55.1
Glyma.05G112000 Glycine max HOM05D007324 ORTHO05D007884 2.9e-06 55.8 115 34.8
arahy.Tifrunner.gnm1.ann1.0E68DR Arachis hypogaea HOM05D007324 ORTHO05D007884 8.4e-06 54.3 90 38.9
arahy.Tifrunner.gnm1.ann1.69TWVD Arachis hypogaea HOM05D007324 ORTHO05D007884 8.4e-06 54.3 90 38.9
Lalb_Chr16g0386011 Lupinus albus HOM05D007324 ORTHO05D007884 8.4e-06 54.3 75 45.3


User provided reference genes

Program Settings