Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 4.2e-145 519.2 610 100.0
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 1.1e-126 458.0 604 97.0
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 2.0e-110 404.1 604 93.4
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 2.8e-109 400.2 607 92.9
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 8.2e-109 398.7 583 95.7
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 2.8e-101 373.6 231 87.9
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 1.5e-97 361.3 237 87.8
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 2.5e-97 360.5 608 89.3
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 2.3e-95 354.0 237 85.7
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 4.4e-94 349.7 229 84.7
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 9.8e-94 348.6 234 83.3
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 3.7e-93 346.7 228 84.6
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 3.7e-93 346.7 228 84.6
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 3.1e-92 343.6 234 81.6
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 2.0e-91 340.9 234 81.2
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 1.3e-90 338.2 226 81.4
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 1.3e-90 338.2 226 81.4
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 7.5e-86 322.4 231 79.7
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 3.7e-77 293.5 612 63.6
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 1.1e-76 292.0 233 72.1
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 1.3e-58 231.9 605 76.4
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 3.4e-54 217.2 554 80.0
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 2.9e-53 214.2 239 56.1
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 6.4e-53 213.0 620 73.5
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 8.4e-53 212.6 552 79.0
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 1.1e-52 212.2 242 53.7
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 1.4e-52 211.8 239 52.3
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 1.9e-52 211.5 241 54.4
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 1.9e-52 211.5 232 54.7
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 2.4e-52 211.1 237 55.3
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.4e-52 211.1 237 55.3
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 3.2e-52 210.7 583 75.8
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 3.2e-52 210.7 251 53.0
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 4.2e-52 210.3 612 74.5
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 7.1e-52 209.5 619 75.0
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 1.2e-51 208.8 238 53.4
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 1.6e-51 208.4 228 55.3
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.6e-51 208.4 610 75.7
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.6e-51 208.4 610 75.7
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 1.6e-51 208.4 236 53.8
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 3.5e-51 207.2 244 52.9
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 4.6e-51 206.8 237 53.2
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 6.0e-51 206.5 239 53.6
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 1.3e-50 205.3 236 55.5
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 1.3e-50 205.3 230 53.0
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 2.3e-50 204.5 235 53.6
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 3.0e-50 204.1 550 78.0
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.1e-49 202.2 627 72.6
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 1.9e-49 201.4 237 54.0
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 1.9e-49 201.4 174 62.1
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 2.5e-49 201.1 195 56.9
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 2.5e-49 201.1 583 75.3
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 4.3e-49 200.3 257 49.8
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 7.3e-49 199.5 176 60.8
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 2.1e-48 198.0 172 62.2
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 2.1e-48 198.0 556 77.9
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 2.8e-48 197.6 610 75.2
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 2.8e-48 197.6 163 62.6
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 3.6e-48 197.2 188 56.4
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 3.6e-48 197.2 227 53.7
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 4.8e-48 196.8 233 50.6
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 4.8e-48 196.8 556 77.9
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 4.8e-48 196.8 624 72.1
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.1e-47 195.7 598 71.9
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.1e-47 195.7 598 71.7
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 2.4e-47 194.5 238 50.4
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 2.4e-47 194.5 170 59.4
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 2.4e-47 194.5 159 63.5
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 3.1e-47 194.1 163 61.3
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.2e-46 192.2 256 50.4
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 2.0e-46 191.4 188 57.4
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 9.9e-46 189.1 198 54.5
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 1.3e-45 188.7 177 58.8
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 1.7e-45 188.3 182 56.6
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 1.7e-45 188.3 180 56.1
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 4.9e-45 186.8 242 48.3
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 6.4e-45 186.4 179 55.9
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 1.4e-44 185.3 164 59.1
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 2.4e-44 184.5 176 57.4
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 4.2e-44 183.7 541 76.0
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 7.1e-44 183.0 177 55.9
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 2.1e-43 181.4 250 48.4
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 2.7e-43 181.0 176 56.8
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 2.7e-43 181.0 230 49.1
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 3.5e-43 180.6 250 48.4
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 1.7e-42 178.3 238 45.8
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 3.0e-42 177.6 240 49.6
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 1.5e-41 175.3 237 49.4
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 2.5e-41 174.5 250 45.6
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 9.6e-41 172.6 216 54.6
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 2.1e-40 171.4 263 47.5
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 6.2e-40 169.9 220 50.0
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 8.1e-40 169.5 162 56.2
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 2.6e-38 164.5 216 52.3
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 7.6e-38 162.9 220 50.5
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 2.2e-37 161.4 123 66.7
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 2.2e-37 161.4 110 71.8
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.2e-37 161.4 220 50.9
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 2.9e-37 161.0 243 46.1
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 5.5e-36 156.8 94 80.9
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 6.0e-35 153.3 120 64.2
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 7.9e-35 152.9 123 61.8
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 5.1e-34 150.2 177 49.2
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 1.5e-33 148.7 166 47.0
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 1.9e-33 148.3 217 46.1
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 2.5e-33 147.9 291 39.5
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 2.6e-30 137.9 157 43.3
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 2.3e-26 124.8 124 57.3
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.5e-25 121.3 182 45.6
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.5e-25 121.3 182 45.6
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 1.3e-24 119.0 179 40.8
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 8.5e-21 106.3 243 37.0
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 3.3e-17 94.4 54 87.0
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 9.7e-17 92.8 213 36.2
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 2.2e-16 91.7 64 68.8
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 3.1e-15 87.8 159 37.1
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 5.3e-15 87.0 175 38.9
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 9.0e-15 86.3 164 37.2
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 7.2e-12 76.6 93 73.1
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 8.8e-10 69.7 62 53.2
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 4.4e-09 67.4 144 32.6
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 1.4e-07 62.4 175 33.1
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 1.4e-07 62.4 175 33.1
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 6.9e-07 60.1 94 60.6


User provided reference genes

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