Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 1.0e-159 566.6 273 100.0
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 1.8e-156 555.8 273 97.4
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 9.0e-156 553.5 273 97.1
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 1.2e-155 553.1 273 97.8
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 1.7e-151 539.3 273 93.8
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 1.5e-147 526.2 273 92.3
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 6.4e-146 520.8 273 89.4
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 8.4e-146 520.4 273 88.6
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 2.5e-142 508.8 274 88.0
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 1.2e-139 500.0 274 86.1
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 1.4e-137 493.0 256 94.5
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 1.6e-133 479.6 256 91.0
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 1.4e-132 476.5 273 82.1
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 2.2e-130 469.2 273 79.1
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 4.1e-116 421.8 273 72.2
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 5.3e-116 421.4 273 71.4
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 1.4e-113 413.3 267 72.3
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 1.6e-112 409.8 273 69.2
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.8e-111 406.4 249 72.3
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 1.8e-111 406.4 249 72.3
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 2.3e-111 406.0 268 71.3
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 3.9e-111 405.2 249 72.3
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 8.8e-111 404.1 249 73.5
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 1.5e-110 403.3 245 73.1
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 4.4e-110 401.7 267 68.9
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 7.4e-110 401.0 273 68.1
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 1.3e-109 400.2 249 71.5
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 1.7e-109 399.8 250 71.6
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.4e-108 396.7 273 68.5
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 1.4e-108 396.7 273 66.7
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 1.8e-108 396.4 261 69.3
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 1.8e-108 396.4 268 68.3
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 3.1e-108 395.6 264 70.1
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 9.1e-108 394.0 268 67.2
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 2.0e-107 392.9 274 66.4
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.6e-107 392.5 249 69.1
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 2.6e-107 392.5 249 69.1
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 4.5e-107 391.7 274 65.0
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 5.9e-107 391.3 262 69.1
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 5.9e-107 391.3 272 68.4
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 7.7e-107 391.0 270 66.3
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 1.0e-106 390.6 264 68.9
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 8.5e-106 387.5 256 68.4
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 8.5e-106 387.5 249 70.7
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 1.4e-105 386.7 256 68.4
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 1.9e-105 386.3 250 70.0
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 1.9e-105 386.3 252 70.6
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 2.7e-104 382.5 273 67.0
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 6.1e-104 381.3 266 65.0
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 6.7e-103 377.9 265 65.3
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 6.7e-103 377.9 262 67.2
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 8.8e-103 377.5 256 67.6
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 1.1e-102 377.1 248 69.0
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 1.5e-102 376.7 256 67.6
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 1.5e-102 376.7 264 67.8
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 2.6e-102 375.9 243 69.1
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 5.7e-102 374.8 249 69.1
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 1.3e-101 373.6 248 68.1
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 1.7e-101 373.2 270 64.1
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 2.8e-101 372.5 270 64.1
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 1.8e-100 369.8 273 61.5
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 5.3e-100 368.2 248 66.9
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 5.3e-100 368.2 249 66.3
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 7.0e-100 367.9 267 63.3
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 9.1e-100 367.5 268 63.4
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 1.6e-99 366.7 274 62.8
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 1.7e-98 363.2 288 60.4
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 1.6e-96 356.7 251 63.7
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 3.6e-96 355.5 258 63.6
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 3.6e-96 355.5 291 58.4
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 1.4e-95 353.6 247 67.2
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 1.5e-94 350.1 244 67.2
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.8e-92 343.2 254 61.8
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 7.7e-91 337.8 247 63.6
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 1.3e-90 337.0 253 59.3
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 1.1e-89 334.0 222 68.0
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 9.8e-86 320.9 241 63.1
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 1.7e-85 320.1 242 62.4
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 2.0e-83 313.2 291 55.0
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 7.7e-83 311.2 236 59.3
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 1.9e-81 306.6 234 60.7
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 2.1e-80 303.1 240 59.2
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 2.8e-80 302.8 235 59.6
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 1.7e-77 293.5 203 65.0
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 4.5e-75 285.4 237 54.9
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 1.9e-73 280.0 175 70.9
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 8.0e-72 274.6 192 64.1
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 1.4e-71 273.9 278 52.5
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 8.3e-69 264.6 234 48.7
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 2.7e-67 259.6 260 45.0
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 4.6e-67 258.8 183 63.4
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 9.5e-65 251.1 185 65.4
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 8.9e-63 244.6 163 70.6
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 9.5e-57 224.6 136 71.3
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 5.4e-52 208.8 144 67.4
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 6.2e-48 195.3 160 53.8
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 4.0e-47 192.6 170 52.4
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 8.9e-47 191.4 133 65.4
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.4e-46 189.1 131 67.9
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 4.4e-46 189.1 131 67.9
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 2.2e-45 186.8 129 60.5
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 2.1e-43 180.3 136 61.8
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 4.6e-43 179.1 111 72.1
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 2.4e-36 156.8 144 54.2
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 2.1e-32 143.7 236 33.9
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 6.2e-32 142.1 103 62.1
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 2.7e-27 126.7 261 36.8
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 4.3e-25 119.4 111 53.2
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 4.8e-24 115.9 154 42.2
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 3.1e-23 113.2 95 56.8
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 1.5e-22 110.9 62 80.6
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 1.8e-18 97.4 68 69.1
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 5.7e-17 92.4 59 74.6
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 9.6e-17 91.7 53 81.1
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.1e-15 86.7 44 84.1
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.1e-15 86.7 44 84.1
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 4.1e-15 86.3 73 61.6
BcaC02g08202 Brassica carinata HOM05D000127 ORTHO05D000243 3.2e-12 76.6 38 89.5
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 3.2e-12 76.6 59 57.6
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 7.9e-11 72.0 146 28.1
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 1.6e-08 64.3 41 70.7
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.4e-07 61.2 86 44.2
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 5.3e-07 59.3 38 65.8
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 5.3e-07 59.3 87 39.1
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 5.3e-07 59.3 38 65.8


User provided reference genes

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