Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A07p22570 Brassica napus HOM05D010817 ORTHO05D000721 5.1e-151 537.7 273 100.0
BraA07t29934Z Brassica rapa HOM05D010817 ORTHO05D000721 3.9e-143 511.5 263 98.5
BcaC08g44747 Brassica carinata HOM05D010817 ORTHO05D000721 1.1e-121 440.3 289 83.4
C06p22860 Brassica napus HOM05D010817 ORTHO05D000721 1.1e-121 440.3 289 83.4
BolC6t37484H Brassica oleracea HOM05D010817 ORTHO05D000721 3.0e-119 432.2 282 82.6
BcaB02g07676 Brassica carinata HOM05D010817 ORTHO05D000721 1.7e-106 389.8 293 75.8
Sp5g06770 Schrenkiella parvula HOM05D010817 ORTHO05D000721 2.0e-75 286.6 294 61.9
Carub.0005s2246 Capsella rubella HOM05D010817 ORTHO05D000721 2.6e-62 243.0 273 56.4
BcaB02g08403 Brassica carinata HOM05D010817 ORTHO05D000721 2.9e-61 239.6 261 58.2
CARHR165790 Cardamine hirsuta HOM05D010817 ORTHO05D000721 1.1e-57 227.6 309 50.5
A04p04300 Brassica napus HOM05D010817 ORTHO05D000721 1.9e-57 226.9 286 55.2
Thhalv10010589m.g Eutrema salsugineum HOM05D010817 ORTHO05D000721 7.3e-57 224.9 261 57.1
BraA04t16141Z Brassica rapa HOM05D010817 ORTHO05D000721 4.0e-55 219.2 292 53.1
AL5G36940 Arabidopsis lyrata HOM05D010817 ORTHO05D000721 2.2e-45 186.8 256 50.8
BolC4t25132H Brassica oleracea HOM05D010817 ORTHO05D000721 2.0e-38 163.7 310 43.2
Aa31LG10G10690 Aethionema arabicum HOM05D010817 ORTHO05D000721 4.4e-38 162.5 269 47.2
BcaC02g09784 Brassica carinata HOM05D010817 ORTHO05D000721 5.8e-38 162.2 310 42.9
C04p36650 Brassica napus HOM05D010817 ORTHO05D000721 5.8e-38 162.2 310 42.9
AT3G55690 Arabidopsis thaliana HOM05D010817 ORTHO05D000721 2.9e-37 159.8 263 46.8
THA.LOC104810062 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 8.4e-37 158.3 327 39.4
THA.LOC104824295 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 1.1e-36 157.9 346 39.0
THA.LOC104809429 Tarenaya hassleriana HOM05D001128 ORTHO05D000721 2.7e-35 153.3 315 39.0
Aa31LG5G19750 Aethionema arabicum HOM05D001128 ORTHO05D000721 2.1e-32 143.7 276 41.3
CARHR134790 Cardamine hirsuta HOM05D012316 ORTHO05D000721 1.1e-31 141.4 289 40.8
AL4G37440 Arabidopsis lyrata HOM05D012316 ORTHO05D000721 5.3e-31 139.0 280 40.4
Sp4g22160 Schrenkiella parvula HOM05D012316 ORTHO05D000721 1.2e-30 137.9 296 40.9
Thhalv10017947m.g Eutrema salsugineum HOM05D012316 ORTHO05D000721 3.4e-30 136.3 252 43.7
AT2G39870 Arabidopsis thaliana HOM05D012316 ORTHO05D000721 4.5e-30 136.0 280 40.4
Carub.0004s2199 Capsella rubella HOM05D012316 ORTHO05D000721 5.8e-30 135.6 283 38.9
C04p67650 Brassica napus HOM05D001949 ORTHO05D003065 2.7e-27 126.7 251 41.0
BolC4t28264H Brassica oleracea HOM05D012316 ORTHO05D000721 2.7e-27 126.7 251 41.0
BraA04t18487Z Brassica rapa HOM05D012316 ORTHO05D000721 4.6e-27 125.9 250 40.4
A04p30210 Brassica napus HOM05D001949 ORTHO05D003065 1.3e-26 124.4 238 41.2
BolC4t22380H Brassica oleracea HOM05D012316 ORTHO05D000721 2.9e-21 106.7 287 35.2
BcaB02g09076 Brassica carinata HOM05D012316 ORTHO05D000721 3.8e-21 106.3 254 39.0
C04p07640 Brassica napus HOM05D012316 ORTHO05D000721 4.9e-21 105.9 288 34.7
Gohir.D04G065500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.4e-20 104.4 298 35.2
Gohir.A05G346700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.7e-19 100.1 298 34.9
Gorai.012G073700 Gossypium raimondii HOM05D001128 ORTHO05D000721 2.7e-19 100.1 298 34.6
Gohir.D10G238700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 4.6e-19 99.4 303 34.3
Gohir.A10G226400 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.3e-18 97.8 309 34.0
Gorai.011G274600 Gossypium raimondii HOM05D001128 ORTHO05D000721 2.3e-18 97.1 309 33.7
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 1.5e-17 94.4 163 42.9
Cpa.g.sc19.247 Carica papaya HOM05D001128 ORTHO05D000721 4.3e-17 92.8 313 32.9
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 9.6e-17 91.7 141 47.5
FAN01G1897 Fragaria x ananassa HOM05D001128 ORTHO05D000721 4.8e-16 89.4 318 33.0
BraA05t19623Z Brassica rapa HOM05D012316 ORTHO05D000721 6.2e-16 89.0 248 35.1
FvH4_7g23630 Fragaria vesca HOM05D001128 ORTHO05D000721 1.4e-15 87.8 318 32.4
FAN06G2816 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.4e-15 87.8 318 32.4
FAN06G3577 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.4e-15 87.8 318 32.4
FAN10G3504 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.4e-15 87.8 295 33.6
MD01G1142200 Malus domestica HOM05D001128 ORTHO05D000721 4.1e-15 86.3 328 30.5
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 4.1e-15 86.3 347 30.5
QL08p062120 Quercus lobata HOM05D001128 ORTHO05D000721 6.9e-15 85.5 352 29.8
arahy.Tifrunner.gnm1.ann1.U326PE Arachis hypogaea HOM05D001128 ORTHO05D000721 9.0e-15 85.1 301 32.6
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 9.0e-15 85.1 130 47.7
MD07G1207900 Malus domestica HOM05D001128 ORTHO05D000721 2.0e-14 84.0 360 30.0
arahy.Tifrunner.gnm1.ann1.1NAQ44 Arachis hypogaea HOM05D001128 ORTHO05D000721 5.8e-14 82.4 301 32.2
Ca_17132_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 1.3e-13 81.3 279 33.3
Potri.008G062200 Populus trichocarpa HOM05D001128 ORTHO05D000721 2.2e-13 80.5 150 44.0
Prupe.2G243200 Prunus persica HOM05D001128 ORTHO05D000721 2.9e-13 80.1 338 30.5
Sabra10G0150300 Salix brachista HOM05D001128 ORTHO05D000721 2.9e-13 80.1 355 29.0
RcHm_v2.0_Chr1g0368901 Rosa chinensis HOM05D001128 ORTHO05D000721 3.8e-13 79.7 335 31.3
TAR633G0212 Trochodendron aralioides HOM05D001128 ORTHO05D000721 3.8e-13 79.7 370 27.8
CANSAT56G3374 Cannabis sativa HOM05D001128 ORTHO05D000721 5.0e-13 79.3 352 29.8
FAN03G2145 Fragaria x ananassa HOM05D001128 ORTHO05D000721 6.5e-13 79.0 136 44.1
A05p06540 Brassica napus HOM05D012316 ORTHO05D000721 1.9e-12 77.4 248 33.5
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 3.2e-12 76.6 288 28.8
BcaC02g12120 Brassica carinata HOM05D012316 ORTHO05D000721 5.5e-12 75.9 288 30.9
CiPaw.01G293700 Carya illinoinensis HOM05D001128 ORTHO05D000721 5.5e-12 75.9 171 39.8
Sabra08G0045800 Salix brachista HOM05D001128 ORTHO05D000721 5.5e-12 75.9 355 29.6
Lalb_Chr18g0052901 Lupinus albus HOM05D001128 ORTHO05D000721 1.2e-11 74.7 294 32.0
Duzib106G0526 Durio zibethinus HOM05D001128 ORTHO05D000721 1.6e-11 74.3 157 40.1
Lj1A945T19 Lonicera japonica HOM05D001128 ORTHO05D000721 2.1e-11 73.9 306 29.4
Phvul.001G238700 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 2.1e-11 73.9 305 29.2
Lj1A946G35 Lonicera japonica HOM05D001128 ORTHO05D000721 3.5e-11 73.2 258 31.0
Manes.07G123000 Manihot esculenta HOM05D001128 ORTHO05D000721 3.5e-11 73.2 350 28.0
TPR.G11407 Trifolium pratense HOM05D001128 ORTHO05D000721 3.5e-11 73.2 277 29.6
Actinidia02898 Actinidia chinensis HOM05D001128 ORTHO05D000721 6.1e-11 72.4 131 39.7
Manes.10G020800 Manihot esculenta HOM05D001128 ORTHO05D000721 1.8e-10 70.9 146 40.4
Lalb_Chr15g0084451 Lupinus albus HOM05D001128 ORTHO05D000721 5.1e-10 69.3 278 30.2
Haze_17155 Corylus avellana HOM05D001128 ORTHO05D000721 6.7e-10 68.9 156 39.7
Ciclev10031729m.g Citrus clementina HOM05D001128 ORTHO05D000721 8.7e-10 68.6 130 40.8
vmacro20201 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 1.1e-09 68.2 278 28.4
Psat5g125600 Pisum sativum HOM05D001128 ORTHO05D000721 1.5e-09 67.8 315 29.8
CiPaw.02G188400 Carya illinoinensis HOM05D001128 ORTHO05D000721 2.5e-09 67.0 134 42.5
TWI09G0818 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 2.5e-09 67.0 145 40.7
TAR636G2726 Trochodendron aralioides HOM05D001128 ORTHO05D000721 2.5e-09 67.0 304 29.6
Cfa001394 Carpinus fangiana HOM05D001128 ORTHO05D000721 5.7e-09 65.9 156 39.1
arahy.Tifrunner.gnm1.ann1.EVQB8B Arachis hypogaea HOM05D001128 ORTHO05D000721 1.3e-08 64.7 146 41.1
arahy.Tifrunner.gnm1.ann1.RKI1B6 Arachis hypogaea HOM05D001128 ORTHO05D000721 1.3e-08 64.7 146 41.1
Glyma.02G252700 Glycine max HOM05D001128 ORTHO05D000721 3.7e-08 63.2 147 39.5
Lalb_Chr17g0346461 Lupinus albus HOM05D001128 ORTHO05D000721 6.3e-08 62.4 159 37.7
Atru.chr12.272 Acer truncatum HOM05D001128 ORTHO05D000721 8.2e-08 62.0 111 40.5
TAR623G0478 Trochodendron aralioides HOM05D001128 ORTHO05D000721 1.1e-07 61.6 143 36.4
Medtr3g069670 Medicago truncatula HOM05D001128 ORTHO05D000721 1.4e-07 61.2 304 28.3
PSO384G2375 Papaver somniferum HOM05D001128 ORTHO05D000721 1.4e-07 61.2 349 27.5
CSS0030928 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 1.8e-07 60.8 317 29.3
ClCG11G006470 Citrullus lanatus HOM05D001128 ORTHO05D000721 1.8e-07 60.8 319 27.6
Lj6g0007644 Lotus japonicus HOM05D001128 ORTHO05D000721 1.8e-07 60.8 321 27.7
Manes.07G123100 Manihot esculenta HOM05D001128 ORTHO05D000721 1.8e-07 60.8 279 29.4
PSO339G4622 Papaver somniferum HOM05D001128 ORTHO05D000721 1.8e-07 60.8 350 27.1
Glyma.11G225400 Glycine max HOM05D001128 ORTHO05D000721 3.1e-07 60.1 307 28.3
Dinv16282 Davidia involucrata HOM05D001128 ORTHO05D000721 4.1e-07 59.7 132 38.6
Nn2g11296 Nelumbo nucifera HOM05D001128 ORTHO05D000721 4.1e-07 59.7 330 27.9
ClCG07G003770 Citrullus lanatus HOM05D001128 ORTHO05D000721 5.3e-07 59.3 135 35.6
Rhsim03G0138400 Rhododendron simsii HOM05D001128 ORTHO05D000721 6.9e-07 58.9 170 32.4
LjContig00141g0001836 Lotus japonicus HOM05D001128 ORTHO05D000721 1.2e-06 58.2 116 38.8
Psat2g036720 Pisum sativum HOM05D001128 ORTHO05D000721 2.0e-06 57.4 140 39.3
Glyma.18G031800 Glycine max HOM05D001128 ORTHO05D000721 3.4e-06 56.6 149 36.2
TWI53G0706 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 3.4e-06 56.6 147 37.4
Lalb_Chr04g0250911 Lupinus albus HOM05D001128 ORTHO05D000721 4.5e-06 56.2 308 28.6
Glyma.14G063900 Glycine max HOM05D001128 ORTHO05D000721 5.9e-06 55.8 148 37.8
MBI05_g02674_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 5.9e-06 55.8 342 25.7
Phvul.008G228300 Phaseolus vulgaris HOM05D001128 ORTHO05D000721 5.9e-06 55.8 145 38.6
Lalb_Chr10g0104881 Lupinus albus HOM05D001128 ORTHO05D000721 1.0e-05 55.1 171 34.5
VMungo1383G0733 Vigna mungo HOM05D001128 ORTHO05D000721 1.0e-05 55.1 141 35.5


User provided reference genes

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