Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A06p04000 Brassica napus HOM05D032197 ORTHO05D040377 1.5e-62 242.7 119 100.0
BraA04t16301Z Brassica rapa HOM05D032197 ORTHO05D040377 1.2e-59 233.0 115 100.0
C05p32660 Brassica napus HOM05D032197 ORTHO05D100717 1.5e-43 179.5 93 91.4
BcaC07g40876 Brassica carinata HOM05D001077 ORTHO05D001053 3.1e-12 75.5 68 63.2
A09p55740 Brassica napus HOM05D001077 ORTHO05D001053 3.1e-12 75.5 68 63.2
C08p38740 Brassica napus HOM05D001077 ORTHO05D001053 3.1e-12 75.5 68 63.2
BolC8t51444H Brassica oleracea HOM05D001077 ORTHO05D001053 3.1e-12 75.5 68 63.2
BraA09t40975Z Brassica rapa HOM05D001077 ORTHO05D001053 3.1e-12 75.5 68 63.2
BcaB08g35171 Brassica carinata HOM05D001077 ORTHO05D001053 6.9e-12 74.3 68 61.8
Carub.0004s0489 Capsella rubella HOM05D001077 ORTHO05D001053 1.5e-11 73.2 64 60.9
Sp4g04440 Schrenkiella parvula HOM05D001077 ORTHO05D001053 2.0e-11 72.8 64 60.9
AT2G25270 Arabidopsis thaliana HOM05D001077 ORTHO05D001053 2.6e-11 72.4 64 60.9
Aa31sc229G20 Aethionema arabicum HOM05D001077 ORTHO05D001053 2.9e-10 68.9 62 59.7
CARHR116270 Cardamine hirsuta HOM05D001077 ORTHO05D001053 8.5e-10 67.4 62 58.1
Oeu033350.1 Olea europaea HOM05D001077 ORTHO05D001053 4.2e-09 65.1 64 51.6
Dinv18183 Davidia involucrata HOM05D001077 ORTHO05D001053 7.2e-09 64.3 64 51.6
Psat5g030680 Pisum sativum HOM05D001077 ORTHO05D001053 1.2e-08 63.5 64 48.4
Cpa.g.sc187.16 Carica papaya HOM05D001077 ORTHO05D001053 1.6e-08 63.2 64 50.0
Atru.chr7.2488 Acer truncatum HOM05D001077 ORTHO05D001053 2.1e-08 62.8 62 50.0
Migut.A00012 Erythranthe guttata HOM05D001077 ORTHO05D001053 2.1e-08 62.8 64 50.0
Lj8C730T2 Lonicera japonica HOM05D001077 ORTHO05D001053 2.1e-08 62.8 62 51.6
Lj1g0001776 Lotus japonicus HOM05D001077 ORTHO05D001053 2.1e-08 62.8 64 48.4
COL.COLO4_18901 Corchorus olitorius HOM05D001077 ORTHO05D001053 2.7e-08 62.4 64 50.0
Lj8C731T2 Lonicera japonica HOM05D001077 ORTHO05D001053 2.7e-08 62.4 62 51.6
Lalb_Chr23g0268391 Lupinus albus HOM05D001077 ORTHO05D001053 2.7e-08 62.4 64 48.4
THA.LOC104803645 Tarenaya hassleriana HOM05D001077 ORTHO05D001053 2.7e-08 62.4 64 53.1
CSS0030718 Camellia sinensis var. sinensis HOM05D001077 ORTHO05D001053 3.6e-08 62.0 64 48.4
Sc08g0006000 Simmondsia chinensis HOM05D001077 ORTHO05D001053 3.6e-08 62.0 64 48.4
Lsat_1_v5_gn_6_115560 Lactuca sativa HOM05D001077 ORTHO05D001053 4.7e-08 61.6 64 50.0
Haze_21476 Corylus avellana HOM05D001077 ORTHO05D001053 6.1e-08 61.2 64 48.4
MSTRG.26026 Avicennia marina HOM05D001077 ORTHO05D001053 7.9e-08 60.8 64 50.0
Ca_15758_v3 Cicer arietinum L. HOM05D001077 ORTHO05D001053 7.9e-08 60.8 64 46.9
Medtr3g106510 Medicago truncatula HOM05D001077 ORTHO05D001053 7.9e-08 60.8 64 46.9
AUR62011231 Chenopodium quinoa HOM05D001077 ORTHO05D001053 1.0e-07 60.5 62 48.4
AUR62020002 Chenopodium quinoa HOM05D001077 ORTHO05D001053 1.0e-07 60.5 62 48.4
Thecc.09G020300 Theobroma cacao HOM05D001077 ORTHO05D001053 1.0e-07 60.5 64 48.4
EL10Ac8g18792 Beta vulgaris HOM05D001077 ORTHO05D001053 1.4e-07 60.1 62 45.2
QL02p020683 Quercus lobata HOM05D001077 ORTHO05D001053 1.8e-07 59.7 60 51.7
Ah.09g224080 Amaranthus hybridus HOM05D001077 ORTHO05D001053 2.3e-07 59.3 62 43.5
Cc08_g00290 Coffea canephora HOM05D001077 ORTHO05D001053 2.3e-07 59.3 64 45.3
Rhsim07G0161400 Rhododendron simsii HOM05D001077 ORTHO05D001053 2.3e-07 59.3 64 45.3
Sc09g0010350 Simmondsia chinensis HOM05D001077 ORTHO05D001053 2.3e-07 59.3 64 48.4
Dinv15877 Davidia involucrata HOM05D001077 ORTHO05D001053 3.0e-07 58.9 64 48.4
Gorai.009G060000 Gossypium raimondii HOM05D001077 ORTHO05D001053 3.0e-07 58.9 64 45.3
Nitab4.5_0006182g0010 Nicotiana tabacum HOM05D001077 ORTHO05D001053 3.0e-07 58.9 64 45.3
RcHm_v2.0_Chr6g0297331 Rosa chinensis HOM05D001077 ORTHO05D001053 3.0e-07 58.9 64 48.4
arahy.Tifrunner.gnm1.ann1.BJI0RA Arachis hypogaea HOM05D001077 ORTHO05D001053 3.9e-07 58.5 58 50.0
CSS0016048 Camellia sinensis var. sinensis HOM05D001077 ORTHO05D001053 3.9e-07 58.5 64 46.9
CAN.G142.11 Capsicum annuum HOM05D001077 ORTHO05D001053 3.9e-07 58.5 64 45.3
MD15G1129700 Malus domestica HOM05D001077 ORTHO05D001053 3.9e-07 58.5 64 46.9
Hund21597 Selenicereus undatus HOM05D001077 ORTHO05D001053 3.9e-07 58.5 62 48.4
PGSC0003DMG400015625 Solanum tuberosum HOM05D001077 ORTHO05D001053 3.9e-07 58.5 64 45.3
VMungo1309G1027 Vigna mungo HOM05D001077 ORTHO05D001053 3.9e-07 58.5 64 43.8
Duzib168G0096 Durio zibethinus HOM05D001077 ORTHO05D001053 5.1e-07 58.2 64 43.8
Glyma.15G199800 Glycine max HOM05D001077 ORTHO05D001053 5.1e-07 58.2 68 45.6
SalBow4G0581 Salvia bowleyana HOM05D001077 ORTHO05D001053 5.1e-07 58.2 64 46.9
Actinidia23079 Actinidia chinensis HOM05D001077 ORTHO05D001053 6.7e-07 57.8 64 42.2
CiPaw.08G008900 Carya illinoinensis HOM05D001077 ORTHO05D001053 6.7e-07 57.8 64 46.9
ECA246G0511 Erigeron canadensis HOM05D001077 ORTHO05D001053 6.7e-07 57.8 64 46.9
FvH4_2g28370 Fragaria vesca HOM05D001077 ORTHO05D001053 6.7e-07 57.8 64 43.8
Glyma.06G065800 Glycine max HOM05D001077 ORTHO05D001053 6.7e-07 57.8 64 43.8
Phvul.009G090800 Phaseolus vulgaris HOM05D001077 ORTHO05D001053 6.7e-07 57.8 64 45.3
Prupe.1G485200 Prunus persica HOM05D001077 ORTHO05D001053 6.7e-07 57.8 64 46.9
TPR.G40191 Trifolium pratense HOM05D001077 ORTHO05D001053 6.7e-07 57.8 62 50.0
VMungo1309G3163 Vigna mungo HOM05D001077 ORTHO05D001053 6.7e-07 57.8 68 45.6
EL10Ac2g04162 Beta vulgaris HOM05D001077 ORTHO05D001053 8.8e-07 57.4 62 48.4
Gohir.A05G056800 Gossypium hirsutum HOM05D001077 ORTHO05D001053 8.8e-07 57.4 64 43.8
Gohir.D05G058900 Gossypium hirsutum HOM05D001077 ORTHO05D001053 8.8e-07 57.4 64 43.8
vmacro05158 Vaccinium macrocarpon HOM05D001077 ORTHO05D001053 8.8e-07 57.4 64 45.3
MSTRG.11601 Avicennia marina HOM05D001077 ORTHO05D001053 1.1e-06 57.0 64 46.9
Ciclev10007910m.g Citrus clementina HOM05D001077 ORTHO05D001053 1.1e-06 57.0 64 45.3
Lalb_Chr11g0073061 Lupinus albus HOM05D001077 ORTHO05D001053 1.1e-06 57.0 58 48.3
Solyc08g041710.3 Solanum lycopersicum HOM05D001077 ORTHO05D001053 1.1e-06 57.0 64 43.8
Sopen08g011780 Solanum pennellii HOM05D001077 ORTHO05D001053 1.1e-06 57.0 64 43.8
GSVIVG01012867001 Vitis vinifera HOM05D001077 ORTHO05D001053 1.1e-06 57.0 64 43.8
Glyma.04G064500 Glycine max HOM05D001077 ORTHO05D001053 1.5e-06 56.6 64 43.8
Lalb_Chr08g0233611 Lupinus albus HOM05D001077 ORTHO05D001053 1.5e-06 56.6 62 43.5
TAR383G0689 Trochodendron aralioides HOM05D001077 ORTHO05D001053 1.5e-06 56.6 64 43.8
Potri.018G023200 Populus trichocarpa HOM05D001077 ORTHO05D001053 2.0e-06 56.2 64 45.3
QL02p090954 Quercus lobata HOM05D001077 ORTHO05D001053 2.0e-06 56.2 64 43.8
CANSAT11G2366 Cannabis sativa HOM05D001077 ORTHO05D001053 2.6e-06 55.8 68 41.2
Glyma.09G093400 Glycine max HOM05D001077 ORTHO05D001053 2.6e-06 55.8 68 44.1
PSO063G0816 Papaver somniferum HOM05D001077 ORTHO05D001053 2.6e-06 55.8 64 42.2
PSO832G3478 Papaver somniferum HOM05D001077 ORTHO05D001053 2.6e-06 55.8 64 42.2
Phvul.009G210800 Phaseolus vulgaris HOM05D001077 ORTHO05D001053 2.6e-06 55.8 68 44.1
PGR044G1389 Punica granatum HOM05D001077 ORTHO05D001053 2.6e-06 55.8 60 48.3
TAR625G0835 Trochodendron aralioides HOM05D001077 ORTHO05D001053 2.6e-06 55.8 62 45.2
Aqoxy7G03570 Aquilegia oxysepala HOM05D001077 ORTHO05D001053 3.3e-06 55.5 68 41.2
Eucgr.C00451 Eucalyptus grandis HOM05D001077 ORTHO05D001053 3.3e-06 55.5 64 40.6
Eucgr.L01040 Eucalyptus grandis HOM05D001077 ORTHO05D001053 3.3e-06 55.5 64 40.6
Manes.16G125400 Manihot esculenta HOM05D001077 ORTHO05D001053 3.3e-06 55.5 60 48.3
Oeu053101.1 Olea europaea HOM05D001077 ORTHO05D001053 3.3e-06 55.5 62 43.5
Actinidia25434 Actinidia chinensis HOM05D001077 ORTHO05D001053 4.4e-06 55.1 64 45.3
CiPaw.15G184000 Carya illinoinensis HOM05D001077 ORTHO05D001053 4.4e-06 55.1 68 42.6
AUR62012438 Chenopodium quinoa HOM05D001077 ORTHO05D001053 4.4e-06 55.1 62 45.2
Lsat_1_v5_gn_5_7920 Lactuca sativa HOM05D001077 ORTHO05D001053 4.4e-06 55.1 63 46.0
MD02G1016700 Malus domestica HOM05D001077 ORTHO05D001053 4.4e-06 55.1 62 43.5
Manes.04G107200 Manihot esculenta HOM05D001077 ORTHO05D001053 4.4e-06 55.1 64 45.3
PGSC0003DMG400014134 Solanum tuberosum HOM05D001077 ORTHO05D001053 4.4e-06 55.1 64 46.9
Ca_02891_v3 Cicer arietinum L. HOM05D001077 ORTHO05D001053 5.7e-06 54.7 62 46.8
Medtr2g450550 Medicago truncatula HOM05D001077 ORTHO05D001053 5.7e-06 54.7 68 44.1
Sabra06G0202200 Salix brachista HOM05D001077 ORTHO05D001053 5.7e-06 54.7 64 43.8
TAR636G0246 Trochodendron aralioides HOM05D001077 ORTHO05D001053 5.7e-06 54.7 64 43.8
GSVIVG01017509001 Vitis vinifera HOM05D001077 ORTHO05D001053 5.7e-06 54.7 59 45.8
ECA232G1528 Erigeron canadensis HOM05D001077 ORTHO05D001053 7.4e-06 54.3 64 45.3
Lj5C77T12 Lonicera japonica HOM05D001077 ORTHO05D001053 7.4e-06 54.3 64 43.8
Nn2g12216 Nelumbo nucifera HOM05D001077 ORTHO05D001053 7.4e-06 54.3 62 46.8
Psat0s1918g0040 Pisum sativum HOM05D001077 ORTHO05D001053 7.4e-06 54.3 62 45.2
Sed0008829 Sechium edule HOM05D001077 ORTHO05D001053 7.4e-06 54.3 60 45.0
Hund04448 Selenicereus undatus HOM05D001077 ORTHO05D001053 7.4e-06 54.3 62 45.2
Solyc06g065870.3 Solanum lycopersicum HOM05D001077 ORTHO05D001053 7.4e-06 54.3 64 42.2
Sopen06g024350 Solanum pennellii HOM05D001077 ORTHO05D001053 7.4e-06 54.3 64 42.2
PGSC0003DMG400026099 Solanum tuberosum HOM05D001077 ORTHO05D001053 7.4e-06 54.3 64 42.2
TWI34G1714 Tripterygium wilfordii HOM05D001077 ORTHO05D001053 7.4e-06 54.3 64 45.3
vmacro19029 Vaccinium macrocarpon HOM05D001077 ORTHO05D001053 7.4e-06 54.3 64 46.9
arahy.Tifrunner.gnm1.ann1.L2GPYS Arachis hypogaea HOM05D001077 ORTHO05D001053 9.7e-06 53.9 71 43.7
Cfa020908 Carpinus fangiana HOM05D001077 ORTHO05D001053 9.7e-06 53.9 64 43.8
Haze_19339 Corylus avellana HOM05D001077 ORTHO05D001053 9.7e-06 53.9 64 43.8
ECA233G3285 Erigeron canadensis HOM05D001077 ORTHO05D001053 9.7e-06 53.9 62 45.2


User provided reference genes

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