Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p18620 Brassica napus HOM05D002373 ORTHO05D008661 4.5e-175 617.8 319 100.0
BcaC08g44045 Brassica carinata HOM05D002373 ORTHO05D008661 1.8e-168 595.9 321 97.2
BolC6t36626H Brassica oleracea HOM05D002373 ORTHO05D008661 7.0e-168 594.0 321 96.9
C06p14460 Brassica napus HOM05D002373 ORTHO05D008661 2.0e-167 592.4 321 96.6
BcaB02g10929 Brassica carinata HOM05D002373 ORTHO05D005805 1.2e-162 576.6 318 93.4
Sp1g39670 Schrenkiella parvula HOM05D002373 ORTHO05D008661 1.1e-157 560.1 324 89.5
Thhalv10011660m.g Eutrema salsugineum HOM05D002373 ORTHO05D008661 1.2e-154 550.1 324 88.3
CARHR043340 Cardamine hirsuta HOM05D002373 ORTHO05D008661 5.4e-152 541.2 324 87.3
AL1G61480 Arabidopsis lyrata HOM05D002373 ORTHO05D008661 2.3e-150 535.8 324 86.1
BraA05t20753Z Brassica rapa HOM05D002373 ORTHO05D008661 2.3e-147 525.8 277 98.6
Carub.0001s4228 Capsella rubella HOM05D002373 ORTHO05D008661 7.5e-146 520.8 324 84.0
AT1G53120 Arabidopsis thaliana HOM05D002373 ORTHO05D008661 2.9e-145 518.8 324 84.6
Aa31LG10G2010 Aethionema arabicum HOM05D002373 ORTHO05D008661 1.0e-142 510.4 324 80.6
THA.LOC104810464 Tarenaya hassleriana HOM05D002373 ORTHO05D008661 2.1e-135 486.1 321 77.3
Thecc.07G090300 Theobroma cacao HOM05D002373 ORTHO05D008661 2.5e-125 452.6 329 71.4
Cpa.g.sc80.70 Carica papaya HOM05D002373 ORTHO05D008661 3.6e-124 448.7 330 69.4
Ciclev10008924m.g Citrus clementina HOM05D002373 ORTHO05D008661 3.4e-122 442.2 325 68.9
Gohir.A13G146100 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.7e-121 439.9 325 68.6
Gohir.D13G151000 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.9e-121 439.1 323 70.3
GSVIVG01014327001 Vitis vinifera HOM05D002373 ORTHO05D008661 7.1e-120 434.5 323 71.2
COL.COLO4_27178 Corchorus olitorius HOM05D002373 ORTHO05D008661 3.5e-119 432.2 322 70.5
HanXRQChr12g0364201 Helianthus annuus HOM05D002373 ORTHO05D008661 1.3e-118 430.3 285 74.4
CSS0006904 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.9e-118 428.7 319 68.3
Actinidia35249 Actinidia chinensis HOM05D002373 ORTHO05D008661 6.6e-118 427.9 323 69.0
Potri.011G119800 Populus trichocarpa HOM05D002373 ORTHO05D008661 1.5e-117 426.8 331 69.5
TAR624G1149 Trochodendron aralioides HOM05D002373 ORTHO05D008661 1.5e-117 426.8 326 69.6
DCAR_019560 Daucus carota HOM05D002373 ORTHO05D008661 1.9e-117 426.4 279 74.2
MD11G1252400 Malus domestica HOM05D002373 ORTHO05D008661 4.8e-116 421.8 326 68.4
CANSAT56G3654 Cannabis sativa HOM05D002373 ORTHO05D008661 6.2e-116 421.4 326 68.4
RcHm_v2.0_Chr5g0033281 Rosa chinensis HOM05D002373 ORTHO05D008661 6.2e-116 421.4 323 67.5
FvH4_3g19840 Fragaria vesca HOM05D002373 ORTHO05D008661 1.4e-115 420.2 322 66.8
Sabra11G0104200 Salix brachista HOM05D002373 ORTHO05D008661 1.4e-115 420.2 271 77.1
CSS0005109 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 3.1e-115 419.1 319 67.1
Atru.BG.257.p Acer truncatum HOM05D002373 ORTHO05D008661 9.0e-115 417.5 254 79.9
CsaV3_3G019460 Cucumis sativus L. HOM05D002373 ORTHO05D008661 9.0e-115 417.5 317 67.2
FAN11G3740 Fragaria x ananassa HOM05D002373 ORTHO05D008661 9.0e-115 417.5 322 66.8
ECA240G3063 Erigeron canadensis HOM05D002373 ORTHO05D008661 1.2e-114 417.2 294 70.7
MELO3C019408.2 Cucumis melo HOM05D002373 ORTHO05D008661 1.5e-114 416.8 302 69.5
FAN25G2634 Fragaria x ananassa HOM05D002373 ORTHO05D008661 1.5e-114 416.8 319 66.5
Lj3g0019501 Lotus japonicus HOM05D002373 ORTHO05D008661 2.0e-114 416.4 328 64.9
Atru.BG.152.p Acer truncatum HOM05D002373 ORTHO05D008661 4.4e-114 415.2 254 79.5
arahy.Tifrunner.gnm1.ann1.CVL1T8 Arachis hypogaea HOM05D002373 ORTHO05D008661 4.4e-114 415.2 312 67.3
Sed0026190 Sechium edule HOM05D002373 ORTHO05D008661 5.8e-114 414.8 281 72.2
arahy.Tifrunner.gnm1.ann1.D1WMTZ Arachis hypogaea HOM05D002373 ORTHO05D008661 9.9e-114 414.1 312 67.3
Lalb_Chr25g0286331 Lupinus albus HOM05D002373 ORTHO05D008661 2.2e-113 412.9 308 66.2
Lsat_1_v5_gn_9_97941 Lactuca sativa HOM05D002373 ORTHO05D008661 3.8e-113 412.1 269 75.5
Glyma.12G224900 Glycine max HOM05D002373 ORTHO05D008661 1.1e-112 410.6 265 73.6
Dinv20179 Davidia involucrata HOM05D002373 ORTHO05D008661 1.4e-112 410.2 274 74.5
Prupe.4G180500 Prunus persica HOM05D002373 ORTHO05D008661 1.9e-112 409.8 326 66.9
PGSC0003DMG400015321 Solanum tuberosum HOM05D002373 ORTHO05D008661 2.4e-112 409.5 279 72.0
Ca_03504_v3 Cicer arietinum L. HOM05D002373 ORTHO05D008661 3.2e-112 409.1 318 64.2
Nn1g04122 Nelumbo nucifera HOM05D002373 ORTHO05D008661 3.2e-112 409.1 270 76.3
Eucgr.F01146 Eucalyptus grandis HOM05D002373 ORTHO05D008661 4.2e-112 408.7 279 73.1
CAN.G213.9 Capsicum annuum HOM05D002373 ORTHO05D008661 5.4e-112 408.3 304 67.1
VMungo1080G1315 Vigna mungo HOM05D002373 ORTHO05D008661 1.2e-111 407.1 325 64.6
TPR.G39017 Trifolium pratense HOM05D002373 ORTHO05D008661 1.6e-111 406.8 265 72.5
Psat5g243920 Pisum sativum HOM05D002373 ORTHO05D008661 3.5e-111 405.6 265 72.1
ClCG05G009320 Citrullus lanatus HOM05D002373 ORTHO05D008661 4.6e-111 405.2 341 63.6
MBI06_g23077_MAGBIO Magnolia biondii HOM05D002373 ORTHO05D008661 4.6e-111 405.2 269 73.6
Medtr2g085340 Medicago truncatula HOM05D002373 ORTHO05D008661 6.0e-111 404.8 323 63.5
Lj1C842T3 Lonicera japonica HOM05D002373 ORTHO05D008661 7.9e-111 404.4 319 67.4
QL08p022081 Quercus lobata HOM05D002373 ORTHO05D008661 7.9e-111 404.4 330 62.7
Sopen12g007190 Solanum pennellii HOM05D002373 ORTHO05D008661 7.9e-111 404.4 279 71.0
Solyc12g013870.3 Solanum lycopersicum HOM05D002373 ORTHO05D008661 3.0e-110 402.5 279 70.6
Migut.H01944 Erythranthe guttata HOM05D002373 ORTHO05D008661 3.9e-110 402.1 322 65.2
Cfa020577 Carpinus fangiana HOM05D002373 ORTHO05D008661 5.1e-110 401.7 316 63.9
CiPaw.11G170200 Carya illinoinensis HOM05D002373 ORTHO05D008661 1.5e-109 400.2 343 63.0
MSTRG.12905 Avicennia marina HOM05D002373 ORTHO05D008661 4.3e-109 398.7 279 70.6
Phvul.002G286700 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 5.6e-109 398.3 265 72.1
PGR083G2563 Punica granatum HOM05D002373 ORTHO05D008661 7.3e-109 397.9 334 63.8
vmacro09529 Vaccinium macrocarpon HOM05D002373 ORTHO05D008661 2.8e-108 396.0 270 74.8
Aqoxy1G02390 Aquilegia oxysepala HOM05D002373 ORTHO05D008661 8.1e-108 394.4 326 64.7
SGA_v2.0_scaffold70G23676 Striga asiatica HOM05D002373 ORTHO05D008661 3.4e-106 389.0 328 61.6
Manes.03G109500 Manihot esculenta HOM05D002373 ORTHO05D008661 4.5e-106 388.7 237 79.3
Nitab4.5_0009292g0020 Nicotiana tabacum HOM05D002373 ORTHO05D008661 4.9e-105 385.2 305 65.6
Peaxi162Scf00000g03511 Petunia axillaris HOM05D002373 ORTHO05D008661 1.1e-104 384.0 301 65.1
EL10Ac4g08187 Beta vulgaris HOM05D002373 ORTHO05D008661 3.2e-104 382.5 319 62.4
Zm00001eb153060 Zea mays HOM05D002373 ORTHO05D008661 4.6e-103 378.6 270 70.0
Hund20000 Selenicereus undatus HOM05D002373 ORTHO05D008661 6.7e-102 374.8 268 69.8
AUR62019433 Chenopodium quinoa HOM05D002373 ORTHO05D008661 1.1e-101 374.0 296 65.5
CDE02G2303 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 2.5e-101 372.9 234 76.1
Ah.06g184370 Amaranthus hybridus HOM05D002373 ORTHO05D008661 3.3e-101 372.5 269 68.4
AUR62039201 Chenopodium quinoa HOM05D002373 ORTHO05D008661 3.3e-101 372.5 296 65.5
TWI38G1988 Tripterygium wilfordii HOM05D002373 ORTHO05D008661 5.6e-101 371.7 272 70.2
Os01g0747700 Oryza sativa ssp. japonica HOM05D002373 ORTHO05D008661 9.6e-101 370.9 274 67.9
FAN16G2188 Fragaria x ananassa HOM05D002373 ORTHO05D008661 4.8e-100 368.6 236 74.6
HPP92_024439 Vanilla planifolia HOM05D002373 ORTHO05D008661 9.0e-99 364.4 259 69.1
ATR0737G132 Amborella trichopoda HOM05D002373 ORTHO05D008661 5.5e-96 355.1 246 69.1
Phvul.005G072600 Phaseolus vulgaris HOM05D002373 ORTHO05D008661 1.3e-94 350.5 237 72.2
unitig_26.g9527 Utricularia gibba HOM05D002373 ORTHO05D008661 8.7e-94 347.8 256 68.8
Gorai.013G170800 Gossypium raimondii HOM05D002373 ORTHO05D008661 9.6e-93 344.4 210 80.0
Sc03g0010080 Simmondsia chinensis HOM05D002373 ORTHO05D008661 4.1e-91 339.0 266 64.7
Haze_09434 Corylus avellana HOM05D002373 ORTHO05D008661 9.0e-91 337.8 318 56.6
Nitab4.5_0000332g0080 Nicotiana tabacum HOM05D002373 ORTHO05D008661 1.2e-90 337.4 305 60.3
Rhsim04G0021500 Rhododendron simsii HOM05D002373 ORTHO05D008661 1.5e-90 337.0 267 67.4
FAN21G4050 Fragaria x ananassa HOM05D002373 ORTHO05D008661 8.4e-89 331.3 209 75.1
PSO541G6350 Papaver somniferum HOM05D002373 ORTHO05D008661 7.4e-85 318.2 215 72.1
Oeu060559.2 Olea europaea HOM05D002373 ORTHO05D008661 8.2e-84 314.7 341 51.6
Pp3c20_21790 Physcomitrium patens HOM05D002373 ORTHO05D008661 2.1e-79 300.1 290 55.2
AagrBONN_evm.TU.Sc2ySwM_344.3401 Anthoceros agrestis HOM05D002373 ORTHO05D008661 9.1e-75 284.6 278 51.4
SMO367G1013 Selaginella moellendorffii HOM05D002373 ORTHO05D008661 3.9e-70 269.2 243 55.1
Mapoly0051s0038 Marchantia polymorpha HOM05D002373 ORTHO05D008661 5.1e-70 268.9 295 49.2
Gorai.013G169000 Gossypium raimondii HOM05D002373 ORTHO05D008661 1.3e-68 264.2 220 62.7
Glyma.13G276400 Glycine max HOM05D002373 ORTHO05D008661 8.5e-65 251.5 190 64.7
CDE08G0691 Ceratophyllum demersum HOM05D002373 ORTHO05D008661 3.6e-63 246.1 148 79.1
Cre12.g502950 Chlamydomonas reinhardtii HOM05D002373 ORTHO05D008661 4.7e-63 245.7 251 51.4
MCO14G219 Micromonas commoda HOM05D002373 ORTHO05D008661 5.2e-54 215.7 292 43.5
CSS0025404 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 1.3e-49 201.1 129 75.2
Thecc.07G090900 Theobroma cacao HOM05D002373 ORTHO05D008661 4.3e-40 169.5 105 77.1
Gohir.D13G152082 Gossypium hirsutum HOM05D002373 ORTHO05D008661 1.0e-33 148.3 88 84.1
Gorai.013G170900 Gossypium raimondii HOM05D002373 ORTHO05D008661 3.0e-33 146.7 88 84.1
Gohir.A13G147066 Gossypium hirsutum HOM05D002373 ORTHO05D008661 2.6e-29 133.7 81 82.7
A01p26780 Brassica napus HOM05D002373 ORTHO05D008661 2.3e-25 120.6 76 82.9
PRCOL_00005720 Prasinoderma coloniale HOM05D002373 ORTHO05D008661 8.3e-20 102.1 261 31.8
CSS0007754 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 7.1e-19 99.0 65 72.3
CSS0007182 Camellia sinensis var. sinensis HOM05D002373 ORTHO05D008661 2.7e-18 97.1 64 73.4
BcaC05g28656 Brassica carinata HOM05D022203 ORTHO05D024331 2.4e-11 73.9 36 100.0
Aa31LG8G11430 Aethionema arabicum HOM05D002105 ORTHO05D001271 1.7e-09 67.8 76 51.3
Atru.chr2.2601 Acer truncatum HOM05D002373 ORTHO05D013107 8.6e-09 65.5 51 62.7
C05p47850 Brassica napus HOM05D022203 ORTHO05D024331 1.8e-06 57.8 28 96.4
MD11G1248800 Malus domestica HOM05D002373 ORTHO05D008661 5.2e-06 56.2 95 41.1


User provided reference genes

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