Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 3.0e-82 308.5 161 100.0
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 3.0e-82 308.5 161 100.0
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 2.1e-80 302.4 162 98.8
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 2.1e-80 302.4 162 98.8
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 4.7e-80 301.2 162 98.1
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 1.4e-79 299.7 162 97.5
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 1.4e-79 299.7 162 97.5
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 1.4e-79 299.7 162 97.5
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 5.2e-79 297.7 162 96.9
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 5.2e-79 297.7 162 96.9
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 6.8e-79 297.4 164 97.6
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 1.2e-78 296.6 162 96.3
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 1.2e-78 296.6 162 96.3
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 1.2e-78 296.6 162 96.3
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 3.4e-78 295.0 162 95.1
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 2.2e-77 292.4 161 96.9
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 2.2e-77 292.4 161 96.9
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 3.7e-77 291.6 162 92.6
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 8.3e-77 290.4 163 93.9
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 1.4e-76 289.7 163 94.5
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 4.1e-76 288.1 162 93.2
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 1.3e-74 283.1 163 93.9
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 1.7e-74 282.7 162 90.1
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 2.9e-69 265.4 162 85.8
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 8.4e-69 263.8 162 85.8
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 5.1e-66 254.6 162 82.7
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 2.9e-61 238.8 163 78.5
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 3.5e-59 231.9 161 78.9
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 1.7e-58 229.6 161 76.4
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 2.0e-54 216.1 162 72.8
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 2.6e-54 215.7 159 73.6
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 2.6e-54 215.7 162 77.8
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 5.8e-54 214.5 162 74.1
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 2.9e-53 212.2 164 70.7
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 6.4e-53 211.1 162 73.5
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 8.4e-53 210.7 166 70.5
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 1.9e-52 209.5 166 71.7
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 2.4e-52 209.1 163 73.0
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 2.4e-52 209.1 163 73.0
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 3.2e-52 208.8 163 69.3
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 3.2e-52 208.8 162 71.6
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 4.2e-52 208.4 165 69.7
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 4.2e-52 208.4 160 73.1
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 7.1e-52 207.6 165 67.3
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 9.3e-52 207.2 163 72.4
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 9.3e-52 207.2 165 72.7
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 1.2e-51 206.8 160 71.2
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 1.2e-51 206.8 167 68.9
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 1.2e-51 206.8 167 68.3
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 1.2e-51 206.8 165 73.3
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 1.6e-51 206.5 138 76.8
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 2.1e-51 206.1 160 71.2
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 2.7e-51 205.7 165 69.1
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 2.7e-51 205.7 165 70.9
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 2.7e-51 205.7 161 73.9
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 2.7e-51 205.7 157 70.1
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 3.5e-51 205.3 140 78.6
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 3.5e-51 205.3 139 80.6
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 3.5e-51 205.3 167 68.3
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 3.5e-51 205.3 162 70.4
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 4.6e-51 204.9 167 68.3
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 4.6e-51 204.9 161 73.3
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 7.9e-51 204.1 164 68.9
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 1.0e-50 203.8 169 68.6
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 1.0e-50 203.8 158 72.2
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 1.0e-50 203.8 157 70.7
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 1.8e-50 203.0 161 73.3
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 1.8e-50 203.0 161 73.3
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 2.3e-50 202.6 167 67.1
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 2.3e-50 202.6 168 67.3
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 3.9e-50 201.8 162 71.6
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 3.9e-50 201.8 162 71.6
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 3.9e-50 201.8 163 65.6
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 5.1e-50 201.4 141 75.2
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 8.7e-50 200.7 138 76.1
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 2.5e-49 199.1 163 67.5
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 3.3e-49 198.7 166 68.1
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 3.3e-49 198.7 138 75.4
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 4.3e-49 198.4 166 65.7
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 4.3e-49 198.4 138 74.6
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 5.6e-49 198.0 164 71.3
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 5.6e-49 198.0 163 66.9
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 5.6e-49 198.0 138 75.4
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 1.3e-48 196.8 157 68.2
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 1.3e-48 196.8 137 75.2
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.6e-48 196.4 139 77.0
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 2.1e-48 196.1 154 71.4
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.7e-48 195.3 164 69.5
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 8.1e-48 194.1 164 67.7
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 8.1e-48 194.1 139 75.5
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 8.1e-48 194.1 138 73.9
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 1.8e-47 193.0 152 67.1
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 2.4e-47 192.6 136 73.5
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.4e-47 192.6 164 65.2
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 3.1e-47 192.2 100 94.0
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 4.0e-47 191.8 138 73.9
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 5.3e-47 191.4 100 92.0
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 5.3e-47 191.4 100 92.0
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 9.0e-47 190.7 135 73.3
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 2.0e-46 189.5 161 68.9
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 2.0e-46 189.5 136 74.3
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 4.5e-46 188.3 152 64.5
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 5.8e-46 188.0 141 72.3
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 5.8e-46 188.0 141 73.0
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.7e-45 186.4 141 72.3
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 1.7e-45 186.4 110 80.9
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 2.2e-45 186.0 108 84.3
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 3.8e-45 185.3 164 64.6
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 3.8e-45 185.3 114 81.6
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 8.4e-45 184.1 141 71.6
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 1.1e-44 183.7 100 86.0
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 7.9e-43 177.6 167 61.1
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 6.9e-39 164.5 138 65.9
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 2.9e-37 159.1 79 94.9
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.2e-36 155.6 96 83.3
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 7.9e-35 151.0 167 56.9
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 3.1e-31 139.0 97 68.0
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 4.5e-30 135.2 94 71.3
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 1.7e-29 133.3 135 49.6
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 2.5e-28 129.4 162 46.9
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 5.5e-28 128.3 113 58.4
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 4.6e-27 125.2 159 47.2
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 1.1e-23 114.0 72 77.8
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 7.9e-19 97.8 51 94.1
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 7.9e-19 97.8 51 94.1
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 7.9e-19 97.8 52 92.3
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 6.7e-18 94.7 90 52.2
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 2.0e-17 93.2 106 52.8
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 4.8e-16 88.6 101 50.5
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 9.4e-12 74.3 118 39.0


User provided reference genes

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