Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p26450 Brassica napus HOM05D007839 ORTHO05D009924 5.9e-77 290.8 149 100.0
C04p63860 Brassica napus HOM05D007839 ORTHO05D009924 2.3e-73 278.9 152 96.1
BraA04t18149Z Brassica rapa HOM05D007839 ORTHO05D009924 2.3e-73 278.9 152 96.1
Sp4g16790 Schrenkiella parvula HOM05D007839 ORTHO05D009924 5.6e-59 231.1 149 81.9
BcaB06g28780 Brassica carinata HOM05D007839 ORTHO05D009924 8.3e-55 217.2 138 84.1
BcaB02g09533 Brassica carinata HOM05D007839 ORTHO05D009924 4.1e-54 214.9 145 77.9
CARHR128620 Cardamine hirsuta HOM05D007839 ORTHO05D009924 7.8e-53 210.7 138 79.7
AT2G34530 Arabidopsis thaliana HOM05D007839 ORTHO05D009924 5.0e-52 208.0 138 79.0
AL4G30500 Arabidopsis lyrata HOM05D007839 ORTHO05D009924 6.6e-52 207.6 147 74.8
BcaC02g11515 Brassica carinata HOM05D007839 ORTHO05D009924 5.6e-51 204.5 143 75.5
Aa31LG10G6870 Aethionema arabicum HOM05D007839 ORTHO05D009924 6.2e-50 201.1 134 77.6
BolC4t23033H Brassica oleracea HOM05D007839 ORTHO05D009924 1.3e-47 193.4 143 72.0
BraA05t20061Z Brassica rapa HOM05D007839 ORTHO05D009924 1.1e-46 190.3 143 70.6
THA.LOC104814297 Tarenaya hassleriana HOM05D007839 ORTHO05D009924 4.3e-35 151.8 140 59.3
Carub.0004s1620 Capsella rubella HOM05D007839 ORTHO05D009924 2.0e-32 142.9 137 61.3
BolC4t27853H Brassica oleracea HOM05D007839 ORTHO05D009924 1.9e-27 126.3 67 97.0
Thhalv10017730m.g Eutrema salsugineum HOM05D007839 ORTHO05D009924 1.4e-25 120.2 91 73.6
Manes.17G069900 Manihot esculenta HOM05D007839 ORTHO05D009924 4.0e-25 118.6 132 48.5
C04p14500 Brassica napus HOM05D007839 ORTHO05D009924 9.9e-24 114.0 67 86.6
A05p11150 Brassica napus HOM05D007839 ORTHO05D009924 2.2e-23 112.8 67 85.1
CiPaw.09G123500 Carya illinoinensis HOM05D007839 ORTHO05D009924 4.9e-23 111.7 122 51.6
CSS0048482 Camellia sinensis var. sinensis HOM05D007839 ORTHO05D009924 3.2e-22 109.0 146 45.2
MBI07_g43266_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 1.6e-21 106.7 142 45.1
Ciclev10017838m.g Citrus clementina HOM05D007839 ORTHO05D009924 2.1e-21 106.3 139 46.0
Haze_05595 Corylus avellana HOM05D007839 ORTHO05D009924 6.6e-20 101.3 140 43.6
HPP92_020033 Vanilla planifolia HOM05D007839 ORTHO05D009924 1.5e-19 100.1 139 43.2
Cpa.g.sc166.6 Carica papaya HOM05D007839 ORTHO05D009924 3.3e-19 99.0 110 48.2
Potri.004G064800 Populus trichocarpa HOM05D007839 ORTHO05D009924 7.3e-19 97.8 133 42.1
Atru.chr10.1228 Acer truncatum HOM05D007839 ORTHO05D009924 9.6e-19 97.4 135 43.0
Duzib235G0881 Durio zibethinus HOM05D007839 ORTHO05D009924 1.6e-18 96.7 140 45.0
FAN25G1788 Fragaria x ananassa HOM05D007839 ORTHO05D009924 2.1e-18 96.3 135 42.2
Sabra11G0067200 Salix brachista HOM05D007839 ORTHO05D009924 3.6e-18 95.5 134 40.3
RcHm_v2.0_Chr5g0014141 Rosa chinensis HOM05D007839 ORTHO05D009924 6.2e-18 94.7 142 44.4
MBI07_g37165_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 8.1e-18 94.4 129 43.4
FAN16G2540 Fragaria x ananassa HOM05D000499 ORTHO05D006980 1.1e-17 94.0 153 40.5
Prupe.4G080500 Prunus persica HOM05D007839 ORTHO05D009924 1.4e-17 93.6 134 44.8
QL05p058124 Quercus lobata HOM05D007839 ORTHO05D009924 1.4e-17 93.6 133 43.6
Cfa000944 Carpinus fangiana HOM05D007839 ORTHO05D009924 2.4e-17 92.8 134 44.0
CANSAT35G0562 Cannabis sativa HOM05D007839 ORTHO05D009924 4.0e-17 92.0 131 40.5
MD10G1262200 Malus domestica HOM05D007839 ORTHO05D009924 5.3e-17 91.7 136 42.6
Sabra04G0043100 Salix brachista HOM05D007839 ORTHO05D009924 5.3e-17 91.7 135 42.2
TWI73G0350 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 6.9e-17 91.3 132 39.4
COL.COLO4_31073 Corchorus olitorius HOM05D007839 ORTHO05D009924 1.5e-16 90.1 137 40.1
Nitab4.5_0009201g0030 Nicotiana tabacum HOM05D007839 ORTHO05D009924 1.5e-16 90.1 133 41.4
arahy.Tifrunner.gnm1.ann1.EDFF2E Arachis hypogaea HOM05D007839 ORTHO05D009924 2.0e-16 89.7 79 59.5
MD05G1283900 Malus domestica HOM05D007839 ORTHO05D009924 2.0e-16 89.7 136 43.4
GSVIVG01021451001 Vitis vinifera HOM05D007839 ORTHO05D009924 2.0e-16 89.7 134 41.0
RcHm_v2.0_Chr5g0014111 Rosa chinensis HOM05D007839 ORTHO05D009924 2.6e-16 89.4 94 53.2
CiPaw.09G123700 Carya illinoinensis HOM05D007839 ORTHO05D009924 3.4e-16 89.0 134 42.5
FvH4_3g05560 Fragaria vesca HOM05D007839 ORTHO05D009924 3.4e-16 89.0 135 40.7
TWI09G0569 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 7.6e-16 87.8 137 37.2
TWI73G0663 Tripterygium wilfordii HOM05D007839 ORTHO05D009924 7.6e-16 87.8 131 38.9
QL05p058196 Quercus lobata HOM05D007839 ORTHO05D009924 9.9e-16 87.4 139 39.6
FAN11G2724 Fragaria x ananassa HOM05D000499 ORTHO05D006980 2.2e-15 86.3 129 41.1
Medtr2g019410 Medicago truncatula HOM05D007839 ORTHO05D009924 4.9e-15 85.1 137 39.4
Peaxi162Scf00008g02916 Petunia axillaris HOM05D007839 ORTHO05D009924 3.2e-14 82.4 136 39.7
Sopen02g019500 Solanum pennellii HOM05D007839 ORTHO05D009924 5.4e-14 81.6 134 39.6
Nitab4.5_0000869g0080 Nicotiana tabacum HOM05D007839 ORTHO05D009924 7.1e-14 81.3 133 39.1
Gohir.D06G142600 Gossypium hirsutum HOM05D007839 ORTHO05D009924 1.2e-13 80.5 131 38.9
Thecc.06G150800 Theobroma cacao HOM05D007839 ORTHO05D009924 1.2e-13 80.5 140 39.3
Gorai.010G166400 Gossypium raimondii HOM05D007839 ORTHO05D009924 1.6e-13 80.1 131 38.9
Gohir.A06G137400 Gossypium hirsutum HOM05D007839 ORTHO05D009924 4.6e-13 78.6 131 38.2
GSVIVG01021458001 Vitis vinifera HOM05D007839 ORTHO05D009924 4.6e-13 78.6 67 62.7
Glyma.15G094000 Glycine max HOM05D007839 ORTHO05D009924 1.3e-12 77.0 131 40.5
ATR1091G096 Amborella trichopoda HOM05D000884 ORTHO05D002127 1.8e-12 76.6 130 36.2
MBI07_g35861_MAGBIO Magnolia biondii HOM05D007839 ORTHO05D009924 3.0e-12 75.9 100 44.0
Phvul.006G164900 Phaseolus vulgaris HOM05D007839 ORTHO05D009924 6.7e-12 74.7 132 40.2
ClCG01G024620 Citrullus lanatus HOM05D007839 ORTHO05D009924 1.5e-11 73.6 131 36.6
PGSC0003DMG400021096 Solanum tuberosum HOM05D007839 ORTHO05D009924 1.5e-11 73.6 67 59.7
TPR.G11372 Trifolium pratense HOM05D007839 ORTHO05D009924 7.4e-11 71.2 67 56.7
Sed0023114 Sechium edule HOM05D007839 ORTHO05D009924 1.8e-09 66.6 138 34.1
Haze_05600 Corylus avellana HOM05D007839 ORTHO05D009924 6.9e-09 64.7 132 35.6
CsaV3_6G051740 Cucumis sativus L. HOM05D007839 ORTHO05D009924 1.5e-08 63.5 131 32.8
Ciclev10016244m.g Citrus clementina HOM05D008587 ORTHO05D010485 3.2e-06 55.8 87 41.4
MELO3C007133.2 Cucumis melo HOM05D007839 ORTHO05D009924 4.2e-06 55.5 131 34.4


User provided reference genes

Program Settings