Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p23730 Brassica napus HOM05D006699 ORTHO05D008399 1.6e-186 656.0 339 100.0
BraA04t17899Z Brassica rapa HOM05D006699 ORTHO05D008399 2.1e-186 655.6 339 99.7
C04p60180 Brassica napus HOM05D006699 ORTHO05D008399 2.8e-183 645.2 339 97.9
BolC4t27520H Brassica oleracea HOM05D006699 ORTHO05D008399 2.8e-183 645.2 339 97.9
Sp4g13510 Schrenkiella parvula HOM05D006699 ORTHO05D008399 1.6e-170 602.8 337 92.3
Thhalv10016897m.g Eutrema salsugineum HOM05D006699 ORTHO05D008399 1.4e-166 589.7 337 90.2
AT2G31040 Arabidopsis thaliana HOM05D006699 ORTHO05D008399 1.2e-162 576.6 338 87.9
AL4G26070 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 1.6e-162 576.2 338 87.9
AL4G26150 Arabidopsis lyrata HOM05D006699 ORTHO05D008399 2.1e-162 575.9 338 88.2
Carub.0004s1225 Capsella rubella HOM05D006699 ORTHO05D008399 4.7e-162 574.7 339 87.9
CARHR124570 Cardamine hirsuta HOM05D006699 ORTHO05D008399 6.7e-161 570.9 337 86.4
COL.COLO4_33580 Corchorus olitorius HOM05D006699 ORTHO05D008399 1.1e-126 457.2 335 69.9
Ciclev10015418m.g Citrus clementina HOM05D006699 ORTHO05D008399 3.2e-126 455.7 345 67.5
Eucgr.A01914 Eucalyptus grandis HOM05D006699 ORTHO05D008399 7.0e-126 454.5 344 66.6
Cfa023335 Carpinus fangiana HOM05D006699 ORTHO05D008399 1.2e-125 453.8 337 67.4
TWI59G0496 Tripterygium wilfordii HOM05D006699 ORTHO05D008399 1.2e-125 453.8 333 70.3
GSVIVG01020707001 Vitis vinifera HOM05D006699 ORTHO05D008399 1.6e-125 453.4 337 68.2
Dinv15443 Davidia involucrata HOM05D006699 ORTHO05D008399 2.7e-125 452.6 341 67.4
QL08p041638 Quercus lobata HOM05D006699 ORTHO05D008399 1.0e-124 450.7 337 68.5
Thecc.01G150500 Theobroma cacao HOM05D006699 ORTHO05D008399 3.0e-124 449.1 335 69.9
HanXRQChr17g0557951 Helianthus annuus HOM05D006699 ORTHO05D008399 5.0e-124 448.4 328 70.7
Potri.014G142200 Populus trichocarpa HOM05D006699 ORTHO05D008399 6.6e-124 448.0 344 66.3
PGR042G0843 Punica granatum HOM05D006699 ORTHO05D008399 8.6e-124 447.6 340 69.1
QL08p041677 Quercus lobata HOM05D006699 ORTHO05D008399 8.6e-124 447.6 337 68.2
TAR626G0153 Trochodendron aralioides HOM05D006699 ORTHO05D008399 1.2e-122 443.7 363 63.4
CANSAT64G2599 Cannabis sativa HOM05D006699 ORTHO05D008399 2.1e-122 443.0 338 68.0
Haze_13371 Corylus avellana HOM05D006699 ORTHO05D008399 2.8e-122 442.6 337 65.6
CiPaw.04G132200 Carya illinoinensis HOM05D006699 ORTHO05D008399 4.7e-122 441.8 341 67.4
AUR62039018 Chenopodium quinoa HOM05D006699 ORTHO05D008399 1.4e-121 440.3 349 67.9
CSS0012388 Camellia sinensis var. sinensis HOM05D006699 ORTHO05D008399 3.1e-121 439.1 336 67.6
ECA233G1148 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.0e-121 438.7 339 70.2
Lsat_1_v5_gn_8_140640 Lactuca sativa HOM05D006699 ORTHO05D008399 2.0e-120 436.4 333 68.5
MD17G1230900 Malus domestica HOM05D006699 ORTHO05D008399 4.4e-120 435.3 333 67.6
Lj3g0015335 Lotus japonicus HOM05D006699 ORTHO05D008399 9.8e-120 434.1 343 63.8
Aa31LG1G7380 Aethionema arabicum HOM05D006699 ORTHO05D008399 1.3e-119 433.7 348 69.0
arahy.Tifrunner.gnm1.ann1.GAG0UF Arachis hypogaea HOM05D006699 ORTHO05D008399 1.7e-119 433.3 344 64.8
CDE10G1046 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 2.9e-119 432.6 334 65.9
Gohir.A12G086400 Gossypium hirsutum HOM05D006699 ORTHO05D008399 2.9e-119 432.6 338 66.6
Lj1A681T38 Lonicera japonica HOM05D006699 ORTHO05D008399 2.9e-119 432.6 338 65.7
EL10Ac2g03349 Beta vulgaris HOM05D006699 ORTHO05D008399 3.7e-119 432.2 348 66.1
Gorai.008G095400 Gossypium raimondii HOM05D006699 ORTHO05D008399 6.4e-119 431.4 338 66.3
MD09G1238000 Malus domestica HOM05D006699 ORTHO05D008399 6.4e-119 431.4 333 66.7
arahy.Tifrunner.gnm1.ann1.0K2T49 Arachis hypogaea HOM05D006699 ORTHO05D008399 1.9e-118 429.9 344 64.5
Prupe.3G118500 Prunus persica HOM05D006699 ORTHO05D008399 1.9e-118 429.9 343 65.0
MSTRG.15092 Avicennia marina HOM05D006699 ORTHO05D008399 1.2e-117 427.2 340 66.2
ClCG02G017820 Citrullus lanatus HOM05D006699 ORTHO05D008399 1.0e-116 424.1 344 65.7
Rhsim06G0131200 Rhododendron simsii HOM05D006699 ORTHO05D008399 1.7e-116 423.3 308 68.5
Gohir.D12G085000 Gossypium hirsutum HOM05D006699 ORTHO05D008399 3.0e-116 422.5 338 65.4
Ca_18111_v3 Cicer arietinum L. HOM05D006699 ORTHO05D008399 5.0e-116 421.8 329 65.7
Migut.M00261 Erythranthe guttata HOM05D006699 ORTHO05D008399 1.5e-115 420.2 344 64.5
RcHm_v2.0_Chr2g0129651 Rosa chinensis HOM05D006699 ORTHO05D008399 1.9e-115 419.9 332 65.7
SGA_v2.0_scaffold9G04816 Striga asiatica HOM05D006699 ORTHO05D008399 2.5e-115 419.5 330 65.8
CsaV3_6G018450 Cucumis sativus L. HOM05D006699 ORTHO05D008399 9.5e-115 417.5 341 64.5
Glyma.06G277600 Glycine max HOM05D006699 ORTHO05D008399 9.5e-115 417.5 330 65.2
Phvul.011G130500 Phaseolus vulgaris HOM05D006699 ORTHO05D008399 2.1e-114 416.4 345 62.9
Psat7g165360 Pisum sativum HOM05D006699 ORTHO05D008399 8.1e-114 414.5 339 63.7
Manes.02G091200 Manihot esculenta HOM05D006699 ORTHO05D008399 2.3e-113 412.9 348 62.6
VMungo1127G1340 Vigna mungo HOM05D006699 ORTHO05D008399 6.8e-113 411.4 329 65.3
unitig_0.g2026 Utricularia gibba HOM05D006699 ORTHO05D008399 8.9e-113 411.0 347 63.1
FvH4_6g27380 Fragaria vesca HOM05D006699 ORTHO05D008399 1.5e-112 410.2 335 64.8
Medtr4g079850 Medicago truncatula HOM05D006699 ORTHO05D008399 7.5e-112 407.9 343 63.0
PGSC0003DMG400007857 Solanum tuberosum HOM05D006699 ORTHO05D008399 4.9e-111 405.2 339 64.9
Sabra14G0107300 Salix brachista HOM05D006699 ORTHO05D008399 6.4e-111 404.8 366 60.1
Lalb_Chr01g0006001 Lupinus albus HOM05D006699 ORTHO05D008399 1.4e-110 403.7 345 63.5
PSO229G0039 Papaver somniferum HOM05D006699 ORTHO05D008399 1.9e-110 403.3 343 60.3
Peaxi162Scf00384g00423 Petunia axillaris HOM05D006699 ORTHO05D008399 5.4e-110 401.7 333 64.0
Actinidia11153 Actinidia chinensis HOM05D006699 ORTHO05D008399 9.2e-110 401.0 338 65.1
PSO675G3944 Papaver somniferum HOM05D006699 ORTHO05D008399 9.2e-110 401.0 343 60.3
FAN14G2123 Fragaria x ananassa HOM05D006699 ORTHO05D008399 8.6e-108 394.4 347 62.2
Hund07812 Selenicereus undatus HOM05D006699 ORTHO05D008399 3.3e-107 392.5 357 61.9
DCAR_017060 Daucus carota HOM05D006699 ORTHO05D008399 4.3e-107 392.1 337 62.3
CAN.G1049.6 Capsicum annuum HOM05D006699 ORTHO05D008399 5.6e-107 391.7 341 62.8
Nitab4.5_0001095g0100 Nicotiana tabacum HOM05D006699 ORTHO05D008399 4.7e-106 388.7 333 62.2
FAN09G4348 Fragaria x ananassa HOM05D006699 ORTHO05D008399 1.1e-105 387.5 369 59.1
Sopen12g006230 Solanum pennellii HOM05D006699 ORTHO05D008399 1.5e-104 383.6 305 65.6
Solyc12g010870.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 9.9e-104 380.9 307 65.1
PGSC0003DMG400020443 Solanum tuberosum HOM05D006699 ORTHO05D008399 2.2e-103 379.8 338 63.0
Solyc07g055050.3 Solanum lycopersicum HOM05D006699 ORTHO05D008399 6.4e-103 378.3 338 63.0
Sopen07g027160 Solanum pennellii HOM05D006699 ORTHO05D008399 1.1e-102 377.5 338 63.3
ATR0602G053 Amborella trichopoda HOM05D006699 ORTHO05D008399 3.2e-102 375.9 319 60.5
Nitab4.5_0000537g0130 Nicotiana tabacum HOM05D006699 ORTHO05D008399 9.6e-99 364.4 343 58.9
Os01g0673800 Oryza sativa ssp. japonica HOM05D006699 ORTHO05D008399 1.9e-94 350.1 317 59.3
Manes.01G133200 Manihot esculenta HOM05D006699 ORTHO05D008399 2.1e-93 346.7 280 65.0
Sc06g0009080 Simmondsia chinensis HOM05D006699 ORTHO05D008399 2.1e-93 346.7 271 65.3
Sed0000889 Sechium edule HOM05D006699 ORTHO05D008399 5.1e-92 342.0 279 66.7
FAN02G3357 Fragaria x ananassa HOM05D006699 ORTHO05D008399 1.9e-91 340.1 302 61.3
Nitab4.5_0011277g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 4.8e-90 335.5 345 55.4
Nitab4.5_0009754g0010 Nicotiana tabacum HOM05D006699 ORTHO05D008399 8.1e-90 334.7 339 57.2
Lju1655A0G36 Lonicera japonica HOM05D006699 ORTHO05D008399 5.8e-88 328.6 406 48.5
Aqoxy1G02064 Aquilegia oxysepala HOM05D006699 ORTHO05D008399 2.2e-87 326.6 259 66.8
Peaxi162Scf00469g00217 Petunia axillaris HOM05D006699 ORTHO05D008399 2.2e-87 326.6 335 57.6
Sed0016519 Sechium edule HOM05D006699 ORTHO05D008399 4.9e-87 325.5 343 54.8
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 3.7e-82 309.3 231 70.6
Eucgr.K01127 Eucalyptus grandis HOM05D006699 ORTHO05D008399 1.2e-80 304.3 334 52.7
MELO3C013567.2 Cucumis melo HOM05D006699 ORTHO05D008399 3.8e-79 299.3 236 64.8
HPP92_009665 Vanilla planifolia HOM05D006699 ORTHO05D008399 3.8e-79 299.3 372 47.8
Oeu018752.1 Olea europaea HOM05D006699 ORTHO05D008399 1.1e-78 297.7 239 63.2
TPR.G28306 Trifolium pratense HOM05D006699 ORTHO05D008399 7.1e-78 295.0 283 57.2
Cc05_g08340 Coffea canephora HOM05D006699 ORTHO05D008399 4.3e-75 285.8 244 62.3
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 2.5e-70 270.0 180 72.2
vmacro12376 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 4.2e-70 269.2 337 47.2
Mapoly0038s0046 Marchantia polymorpha HOM05D006699 ORTHO05D008399 7.9e-69 265.0 303 48.5
Pp3c8_13580 Physcomitrium patens HOM05D006699 ORTHO05D008399 7.9e-69 265.0 333 47.1
Atru.chr6.2796 Acer truncatum HOM05D006699 ORTHO05D008399 1.5e-59 234.2 186 64.5
SEGI_23271 Sequoiadendron giganteum HOM05D006699 ORTHO05D008399 4.3e-59 232.6 250 49.6
AagrBONN_evm.TU.Sc2ySwM_228.3020 Anthoceros agrestis HOM05D006699 ORTHO05D008399 5.7e-59 232.3 276 45.7
SMO014G0045 Selaginella moellendorffii HOM05D006699 ORTHO05D008399 6.9e-57 225.3 333 42.9
Cpa.g.sc52.174 Carica papaya HOM05D006699 ORTHO05D008399 5.1e-52 209.1 189 61.9
Zm00001eb360100 Zea mays HOM05D006699 ORTHO05D008399 6.1e-45 185.7 228 48.7
Cc05_g08350 Coffea canephora HOM05D006699 ORTHO05D008399 8.5e-39 165.2 96 82.3
BraA03t11005Z Brassica rapa HOM05D006699 ORTHO05D008399 1.9e-30 137.5 93 77.4
A03p17330 Brassica napus HOM05D006699 ORTHO05D008399 2.7e-29 133.7 93 76.3
vmacro12375 Vaccinium macrocarpon HOM05D006699 ORTHO05D008399 6.8e-28 129.0 91 63.7
Atru.chr6.2795 Acer truncatum HOM05D006699 ORTHO05D008399 1.7e-26 124.4 76 77.6
Ah.01g003520 Amaranthus hybridus HOM05D006699 ORTHO05D008399 3.1e-25 120.2 104 59.6
Cre01.g049600 Chlamydomonas reinhardtii HOM05D006699 ORTHO05D008399 7.7e-24 115.5 288 32.3
CDE10G0215 Ceratophyllum demersum HOM05D006699 ORTHO05D008399 9.8e-19 98.6 60 78.3
PRCOL_00001453 Prasinoderma coloniale HOM05D006699 ORTHO05D008399 1.1e-17 95.1 261 29.1
Lsat_1_v5_gn_2_38761 Lactuca sativa HOM05D006699 ORTHO05D008399 7.8e-16 89.0 78 56.4
MCO04G044 Micromonas commoda HOM05D006699 ORTHO05D008399 1.7e-15 87.8 276 29.7
C03p20440 Brassica napus HOM05D006699 ORTHO05D042655 5.0e-15 86.3 54 81.5
BolC3t14422H Brassica oleracea HOM05D006699 ORTHO05D042655 5.0e-15 86.3 54 81.5
TPR.G33085 Trifolium pratense HOM05D006699 ORTHO05D008399 9.8e-11 72.0 43 79.1


User provided reference genes

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