Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p09170 Brassica napus HOM05D007586 ORTHO05D009554 1.0e-37 159.5 76 100.0
BraA03t10240Z Brassica rapa HOM05D007586 ORTHO05D009554 1.0e-37 159.5 76 100.0
BcaB01g05279 Brassica carinata HOM05D007586 ORTHO05D009554 4.4e-36 154.1 76 96.1
C03p10700 Brassica napus HOM05D007586 ORTHO05D009554 4.4e-36 154.1 76 96.1
BcaB01g04886 Brassica carinata HOM05D007586 ORTHO05D009554 7.8e-33 143.3 76 89.5
Sp6g25470 Schrenkiella parvula HOM05D007586 ORTHO05D009554 3.0e-32 141.4 76 90.8
BraA10t44138Z Brassica rapa HOM05D007586 ORTHO05D009554 1.5e-31 139.0 76 88.2
Thhalv10015193m.g Eutrema salsugineum HOM05D007586 ORTHO05D009554 2.3e-29 131.7 76 85.5
CARHR194100 Cardamine hirsuta HOM05D007586 ORTHO05D009554 7.5e-28 126.7 77 85.7
BolC3t13546H Brassica oleracea HOM05D007586 ORTHO05D009554 7.0e-26 120.2 60 91.7
BcaB08g36636 Brassica carinata HOM05D007586 ORTHO05D009554 1.9e-23 112.1 76 75.0
Nn4g26123 Nelumbo nucifera HOM05D007586 ORTHO05D009554 9.5e-23 109.8 73 74.0
AL6G30270 Arabidopsis lyrata HOM05D007586 ORTHO05D009554 4.0e-21 104.4 75 70.7
AT5G18920 Arabidopsis thaliana HOM05D007586 ORTHO05D009554 4.0e-21 104.4 78 71.8
A10p20750 Brassica napus HOM05D007586 ORTHO05D009554 2.0e-20 102.1 58 84.5
Carub.0006s1722 Capsella rubella HOM05D007586 ORTHO05D009554 2.0e-20 102.1 78 70.5
COL.COLO4_13963 Corchorus olitorius HOM05D007586 ORTHO05D009554 2.0e-20 102.1 74 67.6
THA.LOC104802735 Tarenaya hassleriana HOM05D007586 ORTHO05D009554 2.6e-20 101.7 74 66.2
Cpa.g.sc16.72 Carica papaya HOM05D007586 ORTHO05D009554 3.4e-20 101.3 72 72.2
Gohir.D10G162600 Gossypium hirsutum HOM05D007586 ORTHO05D009554 7.5e-20 100.1 76 68.4
Gorai.011G181700 Gossypium raimondii HOM05D007586 ORTHO05D009554 7.5e-20 100.1 76 68.4
Atru.chr4.2702 Acer truncatum HOM05D007586 ORTHO05D009554 9.9e-20 99.8 68 69.1
Dinv38351 Davidia involucrata HOM05D007586 ORTHO05D009554 9.9e-20 99.8 78 62.8
Manes.03G188100 Manihot esculenta HOM05D007586 ORTHO05D009554 2.9e-19 98.2 62 75.8
Sabra08G0162000 Salix brachista HOM05D007586 ORTHO05D009554 2.9e-19 98.2 60 76.7
Potri.008G198500 Populus trichocarpa HOM05D007586 ORTHO05D009554 3.7e-19 97.8 60 75.0
Aa31LG11G10810 Aethionema arabicum HOM05D007586 ORTHO05D009554 4.9e-19 97.4 63 79.4
QL06p006198 Quercus lobata HOM05D007586 ORTHO05D009554 4.9e-19 97.4 67 71.6
Gohir.A10G105800 Gossypium hirsutum HOM05D007586 ORTHO05D009554 8.3e-19 96.7 76 67.1
Potri.010G028000 Populus trichocarpa HOM05D007586 ORTHO05D009554 8.3e-19 96.7 65 69.2
Actinidia00073 Actinidia chinensis HOM05D007586 ORTHO05D009554 1.9e-18 95.5 55 78.2
Lj6g0006659 Lotus japonicus HOM05D007586 ORTHO05D009554 3.2e-18 94.7 62 69.4
EL10Ac3g07262 Beta vulgaris HOM05D007586 ORTHO05D009554 5.4e-18 94.0 65 66.2
Haze_01009 Corylus avellana HOM05D007586 ORTHO05D009554 7.1e-18 93.6 55 78.2
vmacro15289 Vaccinium macrocarpon HOM05D007586 ORTHO05D009554 7.1e-18 93.6 74 62.2
CiPaw.02G089500 Carya illinoinensis HOM05D007586 ORTHO05D009554 9.2e-18 93.2 69 66.7
Sopen01g032230 Solanum pennellii HOM05D007586 ORTHO05D009554 9.2e-18 93.2 69 65.2
unitig_749.g14058 Utricularia gibba HOM05D007586 ORTHO05D009554 9.2e-18 93.2 79 57.0
Ah.04g150810 Amaranthus hybridus HOM05D007586 ORTHO05D009554 1.2e-17 92.8 67 62.7
Duzib151G0133 Durio zibethinus HOM05D007586 ORTHO05D009554 1.6e-17 92.4 77 66.2
Lalb_Chr18g0055891 Lupinus albus HOM05D007586 ORTHO05D009554 1.6e-17 92.4 69 63.8
Thecc.04G272400 Theobroma cacao HOM05D007586 ORTHO05D009554 3.5e-17 91.3 71 66.2
GSVIVG01017851001 Vitis vinifera HOM05D007586 ORTHO05D009554 3.5e-17 91.3 55 74.5
ECA246G1660 Erigeron canadensis HOM05D007586 ORTHO05D009554 4.6e-17 90.9 68 63.2
MBI19_g21636_MAGBIO Magnolia biondii HOM05D007586 ORTHO05D009554 4.6e-17 90.9 71 60.6
Psat1g185520 Pisum sativum HOM05D007586 ORTHO05D009554 7.8e-17 90.1 67 64.2
Cc03_g02750 Coffea canephora HOM05D007586 ORTHO05D009554 1.0e-16 89.7 53 75.5
TPR.G18017 Trifolium pratense HOM05D007586 ORTHO05D009554 1.7e-16 89.0 57 70.2
CSS0032912 Camellia sinensis var. sinensis HOM05D007586 ORTHO05D009554 2.3e-16 88.6 53 75.5
DCAR_027132 Daucus carota HOM05D007586 ORTHO05D009554 2.3e-16 88.6 74 56.8
Migut.G00284 Erythranthe guttata HOM05D007586 ORTHO05D009554 2.3e-16 88.6 79 58.2
PSO210G0926 Papaver somniferum HOM05D007586 ORTHO05D009554 2.3e-16 88.6 63 65.1
PSO832G2949 Papaver somniferum HOM05D007586 ORTHO05D009554 2.3e-16 88.6 60 66.7
SalBow2G2177 Salvia bowleyana HOM05D007586 ORTHO05D009554 2.3e-16 88.6 57 71.9
Hma1.2p1_2025F.1_g311520 Hydrangea macrophylla HOM05D007586 ORTHO05D009554 3.0e-16 88.2 70 61.4
Glyma.15G100600 Glycine max HOM05D007586 ORTHO05D009554 3.9e-16 87.8 72 58.3
ATR0626G363 Amborella trichopoda HOM05D007586 ORTHO05D009554 6.6e-16 87.0 67 62.7
Medtr2g020920 Medicago truncatula HOM05D007586 ORTHO05D009554 6.6e-16 87.0 61 65.6
Cfa015540 Carpinus fangiana HOM05D007586 ORTHO05D009554 8.6e-16 86.7 55 70.9
CsaV3_6G005530 Cucumis sativus L. HOM05D007586 ORTHO05D009554 1.1e-15 86.3 66 66.7
Prupe.1G146700 Prunus persica HOM05D007586 ORTHO05D009554 1.9e-15 85.5 62 64.5
ClCG06G005620 Citrullus lanatus HOM05D007586 ORTHO05D009554 2.5e-15 85.1 66 65.2
TAR636G1069 Trochodendron aralioides HOM05D007586 ORTHO05D009554 2.5e-15 85.1 45 86.7
Zm00001eb349880 Zea mays HOM05D007586 ORTHO05D009554 2.5e-15 85.1 75 53.3
RcHm_v2.0_Chr4g0420101 Rosa chinensis HOM05D007586 ORTHO05D009554 3.3e-15 84.7 53 69.8
TWI09G0380 Tripterygium wilfordii HOM05D007586 ORTHO05D009554 3.3e-15 84.7 78 56.4
arahy.Tifrunner.gnm1.ann1.5VHG73 Arachis hypogaea HOM05D007586 ORTHO05D009554 5.6e-15 84.0 65 60.0
arahy.Tifrunner.gnm1.ann1.SH255N Arachis hypogaea HOM05D007586 ORTHO05D009554 7.3e-15 83.6 65 58.5
COL.COLO4_25734 Corchorus olitorius HOM05D007586 ORTHO05D009554 7.3e-15 83.6 46 78.3
MD13G1177700 Malus domestica HOM05D007586 ORTHO05D009554 7.3e-15 83.6 65 61.5
Sed0005131 Sechium edule HOM05D007586 ORTHO05D009554 7.3e-15 83.6 67 61.2
FvH4_4g16650 Fragaria vesca HOM05D007586 ORTHO05D009554 1.6e-14 82.4 82 51.2
FAN12G0362 Fragaria x ananassa HOM05D007586 ORTHO05D009554 1.6e-14 82.4 82 51.2
Glyma.13G212100 Glycine max HOM05D007586 ORTHO05D009554 2.8e-14 81.6 69 58.0
Os05g0404300 Oryza sativa ssp. japonica HOM05D007586 ORTHO05D009554 3.6e-14 81.3 47 74.5
AUR62018376 Chenopodium quinoa HOM05D000949 ORTHO05D001276 4.7e-14 80.9 61 63.9
Phvul.006G158400 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 4.7e-14 80.9 58 62.1
SEGI_37206 Sequoiadendron giganteum HOM05D007586 ORTHO05D009554 1.1e-13 79.7 56 57.1
Lj3g0017006 Lotus japonicus HOM05D007586 ORTHO05D009554 1.4e-13 79.3 46 76.1
CANSAT01G2672 Cannabis sativa HOM05D007586 ORTHO05D009554 1.8e-13 79.0 49 71.4
Phvul.006G158200 Phaseolus vulgaris HOM05D007586 ORTHO05D009554 1.8e-13 79.0 63 57.1
PGR031G0345 Punica granatum HOM05D007586 ORTHO05D009554 3.1e-13 78.2 44 77.3
arahy.Tifrunner.gnm1.ann1.70FWSL Arachis hypogaea HOM05D007586 ORTHO05D009554 1.2e-12 76.3 77 50.6
Ciclev10006319m.g Citrus clementina HOM05D007586 ORTHO05D009554 2.6e-12 75.1 46 73.9
Nitab4.5_0009518g0010 Nicotiana tabacum HOM05D007586 ORTHO05D009554 2.2e-11 72.0 43 69.8
Hma1.2p1_0511F.1_g169220 Hydrangea macrophylla HOM05D000488 ORTHO05D000347 8.4e-11 70.1 53 62.3
Nitab4.5_0000201g0230 Nicotiana tabacum HOM05D007586 ORTHO05D009554 2.4e-10 68.6 43 65.1
FAN22G2185 Fragaria x ananassa HOM05D007586 ORTHO05D009554 4.1e-10 67.8 72 50.0
Ca_00589_v3 Cicer arietinum L. HOM05D002494 ORTHO05D002673 5.4e-10 67.4 37 78.4
Nitab4.5_0000059g0210 Nicotiana tabacum HOM05D007586 ORTHO05D009554 1.6e-09 65.9 48 62.5
Medtr2g020940 Medicago truncatula HOM05D007586 ORTHO05D009554 4.6e-09 64.3 46 65.2
Eucgr.B01188 Eucalyptus grandis HOM05D007586 ORTHO05D009554 2.3e-08 62.0 32 81.2
Pp3c2_37920 Physcomitrium patens HOM05D007586 ORTHO05D009554 8.7e-08 60.1 65 36.9
Peaxi162Scf00095g00411 Petunia axillaris HOM05D007586 ORTHO05D009554 2.1e-06 55.5 35 74.3


User provided reference genes

Program Settings