Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p01240 Brassica napus HOM05D007539 ORTHO05D009315 1.8e-117 426.0 233 100.0
BcaB01g05802 Brassica carinata HOM05D007539 ORTHO05D009315 1.1e-98 363.6 237 81.4
CARHR209760 Cardamine hirsuta HOM05D007539 ORTHO05D009315 3.5e-92 342.0 256 75.0
BolC3t12712H Brassica oleracea HOM05D007539 ORTHO05D009315 7.8e-92 340.9 302 63.9
Thhalv10014552m.g Eutrema salsugineum HOM05D007539 ORTHO05D009315 2.8e-89 332.4 251 75.7
C03p01600 Brassica napus HOM05D007539 ORTHO05D009315 2.1e-84 316.2 197 83.8
BcaB01g05814 Brassica carinata HOM05D007539 ORTHO05D009315 1.0e-83 313.9 193 82.4
BraA03t09504Z Brassica rapa HOM05D007539 ORTHO05D009315 6.4e-78 294.7 271 67.9
Manes.08G015800 Manihot esculenta HOM05D007539 ORTHO05D009315 4.0e-72 275.4 235 61.7
COL.COLO4_22255 Corchorus olitorius HOM05D007539 ORTHO05D009315 1.2e-71 273.9 185 74.1
Duzib093G0735 Durio zibethinus HOM05D007539 ORTHO05D009315 2.9e-70 269.2 185 72.4
Thecc.05G075600 Theobroma cacao HOM05D007539 ORTHO05D009315 3.8e-70 268.9 184 72.8
Lj5g0010413 Lotus japonicus HOM05D007539 ORTHO05D009315 1.1e-69 267.3 184 70.7
Glyma.10G063500 Glycine max HOM05D007539 ORTHO05D009315 1.4e-69 266.9 183 71.6
arahy.Tifrunner.gnm1.ann1.6XWD2H Arachis hypogaea HOM05D007539 ORTHO05D009315 2.4e-69 266.2 183 72.7
arahy.Tifrunner.gnm1.ann1.M3KAW1 Arachis hypogaea HOM05D007539 ORTHO05D009315 2.4e-69 266.2 183 72.7
Psat6g077160 Pisum sativum HOM05D007539 ORTHO05D009315 2.4e-69 266.2 185 71.4
Gorai.009G410900 Gossypium raimondii HOM05D007539 ORTHO05D009315 3.2e-69 265.8 186 72.0
Cfa016483 Carpinus fangiana HOM05D007539 ORTHO05D009315 1.2e-68 263.8 185 70.3
Ca_11568_v3 Cicer arietinum L. HOM05D007539 ORTHO05D009315 1.6e-68 263.5 184 71.7
TPR.G9909 Trifolium pratense HOM05D007539 ORTHO05D009315 2.1e-68 263.1 185 69.2
VMungo0720G2140 Vigna mungo HOM05D007539 ORTHO05D009315 3.5e-68 262.3 183 71.0
Cpa.g.sc5.125 Carica papaya HOM05D007539 ORTHO05D009315 7.8e-68 261.2 184 70.1
Gohir.A04G068300 Gossypium hirsutum HOM05D007539 ORTHO05D009315 1.3e-67 260.4 186 71.0
PGR142G1614 Punica granatum HOM05D007539 ORTHO05D009315 1.3e-67 260.4 180 70.6
Cc06_g04790 Coffea canephora HOM05D007539 ORTHO05D009315 2.3e-67 259.6 182 69.2
QL07p041368 Quercus lobata HOM05D007539 ORTHO05D009315 2.3e-67 259.6 184 68.5
Solyc10g085820.2 Solanum lycopersicum HOM05D007539 ORTHO05D009315 2.3e-67 259.6 183 70.5
Gohir.D04G106800 Gossypium hirsutum HOM05D007539 ORTHO05D009315 3.0e-67 259.2 186 71.0
Ciclev10009520m.g Citrus clementina HOM05D007539 ORTHO05D009315 3.9e-67 258.8 183 69.4
Eucgr.K02419 Eucalyptus grandis HOM05D007539 ORTHO05D009315 3.9e-67 258.8 184 67.4
Phvul.007G226000 Phaseolus vulgaris HOM05D007539 ORTHO05D009315 3.9e-67 258.8 183 70.5
Potri.016G096900 Populus trichocarpa HOM05D007539 ORTHO05D009315 3.9e-67 258.8 180 70.0
Sopen10g035220 Solanum pennellii HOM05D007539 ORTHO05D009315 3.9e-67 258.8 183 69.9
PGSC0003DMG400008599 Solanum tuberosum HOM05D007539 ORTHO05D009315 3.9e-67 258.8 183 69.4
Aqoxy4G02594 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 5.1e-67 258.5 185 69.2
Eucgr.K02422 Eucalyptus grandis HOM05D007539 ORTHO05D009315 5.1e-67 258.5 184 67.4
Nn2g13907 Nelumbo nucifera HOM05D007539 ORTHO05D009315 1.1e-66 257.3 183 68.9
Sc20g0005850 Simmondsia chinensis HOM05D007539 ORTHO05D009315 1.1e-66 257.3 184 68.5
Aqoxy2G01556 Aquilegia oxysepala HOM05D007539 ORTHO05D009315 1.9e-66 256.5 183 69.4
Aa31LG1G21630 Aethionema arabicum HOM05D007539 ORTHO05D009315 3.3e-66 255.8 156 78.8
HanXRQChr08g0218701 Helianthus annuus HOM05D007539 ORTHO05D009315 3.3e-66 255.8 182 68.7
RcHm_v2.0_Chr3g0471301 Rosa chinensis HOM05D007539 ORTHO05D009315 3.3e-66 255.8 188 69.7
Medtr1g062250 Medicago truncatula HOM05D007539 ORTHO05D009315 5.6e-66 255.0 185 69.7
Oeu045245.1 Olea europaea HOM05D007539 ORTHO05D009315 7.3e-66 254.6 184 67.4
CAN.G729.5 Capsicum annuum HOM05D007539 ORTHO05D009315 9.6e-66 254.2 179 70.9
SalBow5G4705 Salvia bowleyana HOM05D007539 ORTHO05D009315 1.3e-65 253.8 184 66.8
Ah.08g211220 Amaranthus hybridus HOM05D007539 ORTHO05D009315 1.6e-65 253.4 179 68.2
Prupe.7G122900 Prunus persica HOM05D007539 ORTHO05D009315 1.6e-65 253.4 183 68.3
MSTRG.10338 Avicennia marina HOM05D007539 ORTHO05D009315 2.1e-65 253.1 184 66.8
Nitab4.5_0009839g0010 Nicotiana tabacum HOM05D007539 ORTHO05D009315 2.1e-65 253.1 234 58.1
MELO3C009408.2 Cucumis melo HOM05D007539 ORTHO05D009315 4.8e-65 251.9 185 68.1
TWI74G0011 Tripterygium wilfordii HOM05D007539 ORTHO05D009315 4.8e-65 251.9 183 67.8
Dinv37358 Davidia involucrata HOM05D007539 ORTHO05D009315 6.2e-65 251.5 185 67.0
Peaxi162Scf00146g00014 Petunia axillaris HOM05D007539 ORTHO05D009315 8.1e-65 251.1 183 67.8
SGA_v2.0_scaffold224G42914 Striga asiatica HOM05D007539 ORTHO05D009315 1.1e-64 250.8 184 65.8
Lj2A124T70 Lonicera japonica HOM05D007539 ORTHO05D009315 1.4e-64 250.4 183 67.8
Sabra16G0100100 Salix brachista HOM05D007539 ORTHO05D009315 1.8e-64 250.0 205 62.9
Os08g0560600 Oryza sativa ssp. japonica HOM05D007539 ORTHO05D009315 5.3e-64 248.4 179 67.0
MBI11_g41953_MAGBIO Magnolia biondii HOM05D007539 ORTHO05D009315 9.0e-64 247.7 186 65.6
Sed0004549 Sechium edule HOM05D007539 ORTHO05D009315 9.0e-64 247.7 185 67.6
EL10Ac7g16719 Beta vulgaris HOM05D007539 ORTHO05D009315 1.2e-63 247.3 184 64.1
MD12G1102800 Malus domestica HOM05D007539 ORTHO05D009315 7.6e-63 244.6 189 65.1
FvH4_6g17220 Fragaria vesca HOM05D007539 ORTHO05D009315 9.9e-63 244.2 186 65.6
Migut.L01732 Erythranthe guttata HOM05D007539 ORTHO05D009315 1.3e-62 243.8 188 63.3
Rhsim03G0085100 Rhododendron simsii HOM05D007539 ORTHO05D009315 1.3e-62 243.8 271 51.7
Zm00001eb175880 Zea mays HOM05D007539 ORTHO05D009315 2.2e-62 243.0 178 65.2
FAN05G2086 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.9e-62 242.7 186 65.1
GSVIVG01033714001 Vitis vinifera HOM05D007539 ORTHO05D009315 4.9e-62 241.9 184 64.7
HPP92_014788 Vanilla planifolia HOM05D007539 ORTHO05D009315 6.4e-62 241.5 182 63.2
AUR62042699 Chenopodium quinoa HOM05D007539 ORTHO05D009315 8.4e-62 241.1 180 64.4
FAN14G0473 Fragaria x ananassa HOM05D007539 ORTHO05D009315 8.4e-62 241.1 186 65.1
Actinidia39861 Actinidia chinensis HOM05D007539 ORTHO05D009315 1.1e-61 240.7 182 64.8
PSO339G1895 Papaver somniferum HOM05D007539 ORTHO05D009315 3.2e-61 239.2 181 65.2
unitig_8.g4721 Utricularia gibba HOM05D007539 ORTHO05D009315 9.3e-61 237.7 186 64.0
FAN05G5748 Fragaria x ananassa HOM05D007539 ORTHO05D009315 1.6e-60 236.9 181 65.2
CANSAT80G1421 Cannabis sativa HOM05D007539 ORTHO05D009315 2.1e-60 236.5 191 66.5
CDE02G3922 Ceratophyllum demersum HOM05D007539 ORTHO05D009315 6.0e-60 235.0 182 63.2
Carub.0006s0239 Capsella rubella HOM05D007539 ORTHO05D009315 5.1e-59 231.9 137 83.2
FAN02G2576 Fragaria x ananassa HOM05D007539 ORTHO05D009315 5.1e-59 231.9 186 62.9
ATR0950G005 Amborella trichopoda HOM05D007539 ORTHO05D009315 6.7e-59 231.5 178 62.9
ECA238G4618 Erigeron canadensis HOM05D007539 ORTHO05D009315 6.7e-59 231.5 180 64.4
AL6G13050 Arabidopsis lyrata HOM05D007539 ORTHO05D009315 3.3e-58 229.2 137 81.8
CiPaw.09G005200 Carya illinoinensis HOM05D007539 ORTHO05D009315 3.7e-57 225.7 141 76.6
CsaV3_3G036460 Cucumis sativus L. HOM05D007539 ORTHO05D009315 1.8e-56 223.4 185 63.2
Nitab4.5_0000725g0080 Nicotiana tabacum HOM05D007539 ORTHO05D009315 1.8e-56 223.4 255 50.6
Glyma.13G148000 Glycine max HOM05D007539 ORTHO05D009315 2.4e-56 223.0 140 75.7
Lalb_Chr02g0155351 Lupinus albus HOM05D007539 ORTHO05D009315 1.2e-55 220.7 161 68.3
Ah.12g063350 Amaranthus hybridus HOM05D007539 ORTHO05D009315 8.4e-54 214.5 153 67.3
TAR633G2614 Trochodendron aralioides HOM05D006793 ORTHO05D009315 1.1e-53 214.2 141 73.0
ClCG10G019640 Citrullus lanatus HOM05D007539 ORTHO05D009315 3.0e-51 206.1 146 67.8
vmacro07349 Vaccinium macrocarpon HOM05D007539 ORTHO05D009315 6.7e-51 204.9 153 66.0
Lsat_1_v5_gn_2_18420 Lactuca sativa HOM05D007539 ORTHO05D009315 2.1e-44 183.3 136 66.2
AUR62040192 Chenopodium quinoa HOM05D007539 ORTHO05D009315 7.4e-42 174.9 136 63.2
AagrBONN_evm.TU.Sc2ySwM_117.3355 Anthoceros agrestis HOM05D007539 ORTHO05D009315 3.1e-40 169.5 181 46.4
Mapoly0014s0214 Marchantia polymorpha HOM05D007539 ORTHO05D009315 2.0e-39 166.8 197 46.2
FAN09G1910 Fragaria x ananassa HOM05D007539 ORTHO05D009315 2.2e-30 136.7 77 83.1
QL07p041388 Quercus lobata HOM05D007539 ORTHO05D009315 1.1e-26 124.4 77 72.7
CBR_g37238 Chara braunii HOM05D007539 ORTHO05D009315 2.7e-20 103.2 250 28.8
AT5G03560 Arabidopsis thaliana HOM05D002804 ORTHO05D003755 1.5e-10 70.9 105 63.8
AL6G13060 Arabidopsis lyrata HOM05D002804 ORTHO05D003755 4.4e-10 69.3 99 49.5
FAN13G0623 Fragaria x ananassa HOM05D002804 ORTHO05D003755 9.7e-10 68.2 87 52.9
Carub.0006s0240 Capsella rubella HOM05D002804 ORTHO05D003755 2.7e-07 60.1 30 90.0


User provided reference genes

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