Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p41270 Brassica napus HOM05D004151 ORTHO05D004775 1.7e-82 309.7 204 100.0
BNapus_Darmor_BZH_scaffold_78p00440 Brassica napus HOM05D004151 ORTHO05D004775 1.7e-82 309.7 204 100.0
BraA01t04550Z Brassica rapa HOM05D004151 ORTHO05D004775 1.4e-81 306.6 204 99.0
BcaNung05743 Brassica carinata HOM05D004151 ORTHO05D004775 2.9e-74 282.3 205 93.7
BolC1t05799H Brassica oleracea HOM05D004151 ORTHO05D004775 4.3e-70 268.5 189 89.9
BcaNung05745 Brassica carinata HOM05D004151 ORTHO05D004775 4.0e-68 261.9 185 90.3
BolC3t13499H Brassica oleracea HOM05D004151 ORTHO05D004775 3.4e-59 232.3 168 85.7
A03p08690 Brassica napus HOM05D004151 ORTHO05D004775 4.5e-59 231.9 169 82.8
Sp3g02890 Schrenkiella parvula HOM05D004151 ORTHO05D004775 2.9e-58 229.2 204 83.3
BcaB01g05179 Brassica carinata HOM05D004151 ORTHO05D004775 1.4e-57 226.9 168 84.5
C03p10140 Brassica napus HOM05D004151 ORTHO05D004775 1.4e-57 226.9 168 84.5
BraA03t10192Z Brassica rapa HOM05D004151 ORTHO05D004775 1.4e-57 226.9 168 84.5
Sp6g26140 Schrenkiella parvula HOM05D004151 ORTHO05D004775 4.6e-56 221.9 166 81.3
Thhalv10014755m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 7.9e-56 221.1 150 82.0
AT3G03920 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 3.9e-55 218.8 208 73.6
A02p04770 Brassica napus HOM05D004151 ORTHO05D004775 3.9e-55 218.8 165 81.2
CARHR078040 Cardamine hirsuta HOM05D004151 ORTHO05D004775 1.1e-54 217.2 167 71.3
Thhalv10021561m.g Eutrema salsugineum HOM05D004151 ORTHO05D004775 2.5e-54 216.1 150 85.3
BcaC03g13582 Brassica carinata HOM05D004151 ORTHO05D004775 4.3e-54 215.3 165 77.6
BolC2t06882H Brassica oleracea HOM05D004151 ORTHO05D004775 4.3e-54 215.3 165 77.6
Carub.0003s0316 Capsella rubella HOM05D004151 ORTHO05D004775 5.6e-54 214.9 199 79.4
BraA02t05436Z Brassica rapa HOM05D004151 ORTHO05D004775 7.4e-54 214.5 165 77.6
CARHR194880 Cardamine hirsuta HOM05D004151 ORTHO05D004775 2.1e-53 213.0 165 80.6
C02p09730 Brassica napus HOM05D004151 ORTHO05D004775 4.8e-53 211.8 165 77.0
AL3G13810 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 1.4e-52 210.3 155 83.2
Ah.06g191800 Amaranthus hybridus HOM05D004151 ORTHO05D004775 1.8e-52 209.9 177 76.3
SGA_v2.0_scaffold274G46513 Striga asiatica HOM05D004151 ORTHO05D004775 4.0e-52 208.8 157 81.5
Sabra13G0051900 Salix brachista HOM05D004151 ORTHO05D004775 3.4e-51 205.7 165 75.8
GSVIVG01033401001 Vitis vinifera HOM05D004151 ORTHO05D004775 4.5e-51 205.3 180 76.1
TAR369G0512 Trochodendron aralioides HOM05D004151 ORTHO05D004775 7.6e-51 204.5 153 83.0
BcaB05g23300 Brassica carinata HOM05D004151 ORTHO05D004775 2.2e-50 203.0 150 82.0
CsaV3_4G013280 Cucumis sativus L. HOM05D004151 ORTHO05D004775 2.2e-50 203.0 168 75.6
AL6G29380 Arabidopsis lyrata HOM05D004151 ORTHO05D004775 2.9e-50 202.6 148 77.7
Glyma.16G041400 Glycine max HOM05D004151 ORTHO05D004775 2.9e-50 202.6 166 78.9
Gohir.A08G213200 Gossypium hirsutum HOM05D004151 ORTHO05D004775 2.9e-50 202.6 146 82.9
Gorai.004G244500 Gossypium raimondii HOM05D004151 ORTHO05D004775 2.9e-50 202.6 146 82.9
Aa31LG11G11430 Aethionema arabicum HOM05D004151 ORTHO05D004775 4.9e-50 201.8 150 80.7
THA.LOC104827273 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 6.5e-50 201.4 150 81.3
Sed0023399 Sechium edule HOM05D004151 ORTHO05D004775 8.4e-50 201.1 149 81.2
Carub.0006s1646 Capsella rubella HOM05D004151 ORTHO05D004775 1.1e-49 200.7 146 81.5
Gohir.D08G230300 Gossypium hirsutum HOM05D004151 ORTHO05D004775 1.1e-49 200.7 146 82.2
Nn7g35851 Nelumbo nucifera HOM05D004151 ORTHO05D004775 1.1e-49 200.7 149 79.9
Sed0025621 Sechium edule HOM05D004151 ORTHO05D004775 1.4e-49 200.3 166 75.9
Ah.13g075350 Amaranthus hybridus HOM05D004151 ORTHO05D004775 1.9e-49 199.9 150 78.7
ClCG04G005310 Citrullus lanatus HOM05D004151 ORTHO05D004775 1.9e-49 199.9 151 82.1
Hma1.2p1_0134F.1_g061640 Hydrangea macrophylla HOM05D004151 ORTHO05D004775 1.9e-49 199.9 143 84.6
MELO3C008801.2 Cucumis melo HOM05D004151 ORTHO05D004775 2.5e-49 199.5 168 80.4
Thecc.05G294500 Theobroma cacao HOM05D004151 ORTHO05D004775 3.2e-49 199.1 149 79.9
FvH4_1g30320 Fragaria vesca HOM05D004151 ORTHO05D004775 4.2e-49 198.7 164 75.0
FAN28G2413 Fragaria x ananassa HOM05D004151 ORTHO05D004775 4.2e-49 198.7 143 81.1
Manes.08G144000 Manihot esculenta HOM05D004151 ORTHO05D004775 4.2e-49 198.7 146 82.2
PGR142G1491 Punica granatum HOM05D004151 ORTHO05D004775 4.2e-49 198.7 148 81.8
Duzib106G1401 Durio zibethinus HOM05D004151 ORTHO05D004775 5.5e-49 198.4 149 79.9
Peaxi162Scf00003g04832 Petunia axillaris HOM05D004151 ORTHO05D004775 5.5e-49 198.4 161 70.8
AT5G18180 Arabidopsis thaliana HOM05D004151 ORTHO05D004775 9.3e-49 197.6 208 68.8
CANSAT78G0749 Cannabis sativa HOM05D004151 ORTHO05D004775 9.3e-49 197.6 182 72.0
SalBow5G4201 Salvia bowleyana HOM05D004151 ORTHO05D004775 1.2e-48 197.2 152 74.3
TWI32G1207 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 1.2e-48 197.2 179 77.1
Lalb_Chr14g0364491 Lupinus albus HOM05D004151 ORTHO05D004775 1.6e-48 196.8 158 69.0
PSO384G0229 Papaver somniferum HOM05D004151 ORTHO05D004775 1.6e-48 196.8 147 80.3
Aa31LG5G14500 Aethionema arabicum HOM05D004151 ORTHO05D004775 2.1e-48 196.4 208 70.7
Haze_19418 Corylus avellana HOM05D004151 ORTHO05D004775 2.1e-48 196.4 167 72.5
Haze_19447 Corylus avellana HOM05D004151 ORTHO05D004775 2.1e-48 196.4 167 72.5
Manes.09G141400 Manihot esculenta HOM05D004151 ORTHO05D004775 2.1e-48 196.4 154 78.6
PSO339G5713 Papaver somniferum HOM05D004151 ORTHO05D004775 2.1e-48 196.4 146 80.8
Cc06_g22960 Coffea canephora HOM05D004151 ORTHO05D004775 2.7e-48 196.1 163 66.3
PSO063G0165 Papaver somniferum HOM05D004151 ORTHO05D004775 2.7e-48 196.1 154 80.5
QL07p019530 Quercus lobata HOM05D004151 ORTHO05D004775 2.7e-48 196.1 159 78.0
SEGI_32651 Sequoiadendron giganteum HOM05D004151 ORTHO05D004775 2.7e-48 196.1 149 75.2
HPP92_021240 Vanilla planifolia HOM05D004151 ORTHO05D004775 2.7e-48 196.1 150 78.7
Cfa016441 Carpinus fangiana HOM05D004151 ORTHO05D004775 4.6e-48 195.3 200 62.5
Gohir.A11G296500 Gossypium hirsutum HOM05D004151 ORTHO05D004775 4.6e-48 195.3 146 80.1
Lj1g0021266 Lotus japonicus HOM05D004151 ORTHO05D004775 4.6e-48 195.3 183 72.1
COL.COLO4_13597 Corchorus olitorius HOM05D004151 ORTHO05D004775 6.0e-48 194.9 143 81.8
MD05G1045500 Malus domestica HOM05D004151 ORTHO05D004775 6.0e-48 194.9 164 68.9
FAN19G1796 Fragaria x ananassa HOM05D004151 ORTHO05D004775 7.9e-48 194.5 164 74.4
FAN26G2823 Fragaria x ananassa HOM05D004151 ORTHO05D004775 7.9e-48 194.5 164 74.4
Lalb_Chr22g0359191 Lupinus albus HOM05D004151 ORTHO05D004775 7.9e-48 194.5 166 66.3
unitig_21.g20195 Utricularia gibba HOM05D004151 ORTHO05D004775 7.9e-48 194.5 163 76.1
EL10Ac3g06820 Beta vulgaris HOM05D004151 ORTHO05D004775 1.0e-47 194.1 146 79.5
Dinv37014 Davidia involucrata HOM05D004151 ORTHO05D004775 1.0e-47 194.1 184 65.2
Gohir.D11G310400 Gossypium hirsutum HOM05D004151 ORTHO05D004775 1.0e-47 194.1 146 79.5
Gorai.007G343400 Gossypium raimondii HOM05D004151 ORTHO05D004775 1.0e-47 194.1 146 79.5
Os11g0579800 Oryza sativa ssp. japonica HOM05D004151 ORTHO05D004775 1.3e-47 193.7 151 74.8
PSO782G4796 Papaver somniferum HOM05D004151 ORTHO05D004775 1.3e-47 193.7 154 75.3
FAN23G0170 Fragaria x ananassa HOM05D004151 ORTHO05D004775 1.8e-47 193.4 164 74.4
Nitab4.5_0007542g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.8e-47 193.4 150 74.7
Nitab4.5_0009048g0010 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.8e-47 193.4 150 77.3
Sc25g0004980 Simmondsia chinensis HOM05D004151 ORTHO05D004775 1.8e-47 193.4 178 71.3
PGSC0003DMG400008366 Solanum tuberosum HOM05D004151 ORTHO05D004775 1.8e-47 193.4 175 65.1
TPR.G5895 Trifolium pratense HOM05D004151 ORTHO05D004775 1.8e-47 193.4 171 74.9
Duzib177G0709 Durio zibethinus HOM05D004151 ORTHO05D004775 2.3e-47 193.0 151 79.5
Medtr7g085640 Medicago truncatula HOM05D004151 ORTHO05D004775 2.3e-47 193.0 182 73.6
Psat0s1971g0280 Pisum sativum HOM05D004151 ORTHO05D004775 2.3e-47 193.0 150 78.0
Potri.013G058400 Populus trichocarpa HOM05D004151 ORTHO05D004775 2.3e-47 193.0 161 74.5
RcHm_v2.0_Chr3g0490211 Rosa chinensis HOM05D004151 ORTHO05D004775 2.3e-47 193.0 192 67.7
MSTRG.19934 Avicennia marina HOM05D004151 ORTHO05D004775 3.0e-47 192.6 165 75.2
AUR62032690 Chenopodium quinoa HOM05D004151 ORTHO05D004775 3.0e-47 192.6 145 80.0
THA.LOC104802867 Tarenaya hassleriana HOM05D004151 ORTHO05D004775 3.0e-47 192.6 151 78.8
Solyc10g078540.3 Solanum lycopersicum HOM05D004151 ORTHO05D004775 1.1e-46 190.7 175 64.0
Sopen10g029190 Solanum pennellii HOM05D004151 ORTHO05D004775 1.1e-46 190.7 175 64.0
Oeu059999.1 Olea europaea HOM05D004151 ORTHO05D004775 1.5e-46 190.3 161 67.1
Atru.chr5.2062 Acer truncatum HOM05D004151 ORTHO05D004775 2.5e-46 189.5 204 64.7
arahy.Tifrunner.gnm1.ann1.JDMG7B Arachis hypogaea HOM05D004151 ORTHO05D004775 2.5e-46 189.5 150 79.3
arahy.Tifrunner.gnm1.ann1.PLSY77 Arachis hypogaea HOM05D004151 ORTHO05D004775 2.5e-46 189.5 150 79.3
Dinv14579 Davidia involucrata HOM05D004151 ORTHO05D004775 2.5e-46 189.5 156 75.0
CDE06G0359 Ceratophyllum demersum HOM05D004151 ORTHO05D004775 3.3e-46 189.1 154 74.0
Phvul.001G110400 Phaseolus vulgaris HOM05D004151 ORTHO05D004775 3.3e-46 189.1 159 72.3
Migut.J01888 Erythranthe guttata HOM05D004151 ORTHO05D004775 4.3e-46 188.7 150 78.7
Lsat_1_v5_gn_8_24760 Lactuca sativa HOM05D004151 ORTHO05D004775 7.4e-46 188.0 154 77.9
TWI34G0161 Tripterygium wilfordii HOM05D004151 ORTHO05D004775 7.4e-46 188.0 161 74.5
Pp3c25_15020 Physcomitrium patens HOM05D004151 ORTHO05D004775 9.6e-46 187.6 151 74.2
HanXRQChr07g0204461 Helianthus annuus HOM05D004151 ORTHO05D004775 1.3e-45 187.2 151 76.2
Hund24835 Selenicereus undatus HOM05D004151 ORTHO05D004775 2.1e-45 186.4 179 71.5
Prupe.8G064800 Prunus persica HOM05D004151 ORTHO05D004775 2.8e-45 186.0 165 72.1
Atru.chr5.2060 Acer truncatum HOM05D004151 ORTHO05D004775 3.7e-45 185.7 204 64.2
Zm00001eb200450 Zea mays HOM05D004151 ORTHO05D004775 3.7e-45 185.7 153 75.2
MD00G1189600 Malus domestica HOM05D004151 ORTHO05D004775 4.8e-45 185.3 201 64.2
Aqoxy1G00486 Aquilegia oxysepala HOM05D004151 ORTHO05D004775 6.3e-45 184.9 150 78.0
VMungo1383G2477 Vigna mungo HOM05D004151 ORTHO05D004775 6.3e-45 184.9 150 76.7
CiPaw.09G001900 Carya illinoinensis HOM05D004151 ORTHO05D004775 1.1e-44 184.1 154 74.0
Glyma.19G110900 Glycine max HOM05D004151 ORTHO05D004775 1.1e-44 184.1 180 72.2
HanXRQChr08g0216931 Helianthus annuus HOM05D004151 ORTHO05D004775 3.1e-44 182.6 177 75.1
Pp3c5_28430 Physcomitrium patens HOM05D004151 ORTHO05D004775 5.3e-44 181.8 149 73.2
ATR0697G007 Amborella trichopoda HOM05D004151 ORTHO05D004775 1.5e-43 180.3 142 78.2
Lsat_1_v5_gn_8_145841 Lactuca sativa HOM05D004151 ORTHO05D004775 2.0e-43 179.9 151 75.5
Potri.019G034900 Populus trichocarpa HOM05D004151 ORTHO05D004775 2.0e-43 179.9 157 75.2
Oeu049600.1 Olea europaea HOM05D004151 ORTHO05D004775 3.4e-43 179.1 177 67.2
CSS0045523 Camellia sinensis var. sinensis HOM05D004151 ORTHO05D004775 4.5e-43 178.7 153 73.2
Mapoly0086s0024 Marchantia polymorpha HOM05D004151 ORTHO05D004775 5.9e-43 178.3 108 77.8
ECA233G5487 Erigeron canadensis HOM05D004151 ORTHO05D004775 1.0e-42 177.6 167 71.3
Zm00001eb114360 Zea mays HOM05D004151 ORTHO05D004775 1.0e-42 177.6 187 63.6
AagrBONN_evm.TU.Sc2ySwM_362.2901 Anthoceros agrestis HOM05D004151 ORTHO05D004775 3.8e-42 175.6 150 70.7
Rhsim04G0087500 Rhododendron simsii HOM05D004151 ORTHO05D004775 5.0e-42 175.3 163 63.8
vmacro09141 Vaccinium macrocarpon HOM05D004151 ORTHO05D004775 2.5e-41 172.9 157 68.8
Actinidia22083 Actinidia chinensis HOM05D004151 ORTHO05D004775 3.2e-41 172.6 148 72.3
Sabra19G0042500 Salix brachista HOM05D004151 ORTHO05D004775 3.2e-41 172.6 146 76.7
Sabra19G0044800 Salix brachista HOM05D004151 ORTHO05D004775 3.2e-41 172.6 146 76.7
Cpa.g.sc51.114 Carica papaya HOM05D004151 ORTHO05D004775 9.3e-41 171.0 95 85.3
COL.COLO4_13598 Corchorus olitorius HOM05D004151 ORTHO05D004775 1.2e-40 170.6 148 72.3
CBR_g48747 Chara braunii HOM05D004151 ORTHO05D004775 3.6e-40 169.1 159 68.6
Nitab4.5_0004844g0050 Nicotiana tabacum HOM05D004151 ORTHO05D004775 6.1e-40 168.3 89 89.9
CAN.G960.49 Capsicum annuum HOM05D004151 ORTHO05D004775 1.3e-39 167.2 103 81.6
Peaxi162Scf00076g01048 Petunia axillaris HOM05D004151 ORTHO05D004775 5.1e-39 165.2 164 62.2
Cre13.g567850 Chlamydomonas reinhardtii HOM05D004151 ORTHO05D004775 6.7e-39 164.9 197 65.5
Hund19236 Selenicereus undatus HOM05D004151 ORTHO05D004775 1.9e-38 163.3 110 73.6
Ca_08267_v3 Cicer arietinum L. HOM05D004151 ORTHO05D004775 1.3e-37 160.6 90 84.4
Nitab4.5_0002769g0090 Nicotiana tabacum HOM05D004151 ORTHO05D004775 1.4e-36 157.1 154 70.1
BolC2t11912H Brassica oleracea HOM05D004151 ORTHO05D004775 5.9e-35 151.8 129 65.1
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 2.2e-34 149.8 106 77.4
MCO13G219 Micromonas commoda HOM05D004151 ORTHO05D004775 3.2e-33 146.0 126 63.5
SMO347G0554 Selaginella moellendorffii HOM05D004151 ORTHO05D004775 7.2e-33 144.8 123 63.4
C09p58800 Brassica napus HOM05D004151 ORTHO05D004775 3.9e-31 139.0 80 80.0
BraA10t42874Z Brassica rapa HOM05D004151 ORTHO05D004775 3.7e-29 132.5 102 69.6
C02p58510 Brassica napus HOM05D004151 ORTHO05D004775 1.6e-24 117.1 95 63.2
PRCOL_00005119 Prasinoderma coloniale HOM05D005848 ORTHO05D007532 6.1e-24 115.2 76 64.5
unitig_744.g24550 Utricularia gibba HOM05D004151 ORTHO05D004775 2.6e-22 109.8 103 63.1
Haze_27090 Corylus avellana HOM05D000590 ORTHO05D004775 7.4e-22 108.2 115 47.8
Actinidia30553 Actinidia chinensis HOM05D004151 ORTHO05D004775 4.8e-21 105.5 58 87.9
HanXRQChr05g0143841 Helianthus annuus HOM05D004151 ORTHO05D004775 2.0e-19 100.1 145 53.8
Oeu035720.1 Olea europaea HOM05D004151 ORTHO05D004775 3.2e-17 92.8 107 52.3
Zm00001eb274230 Zea mays HOM05D004151 ORTHO05D004775 1.2e-16 90.9 50 78.0
Oeu035726.1 Olea europaea HOM05D004151 ORTHO05D004775 2.7e-16 89.7 107 51.4
BcaB08g36698 Brassica carinata HOM05D004151 ORTHO05D004775 6.3e-13 78.6 46 82.6
Atru.chr10.1764 Acer truncatum HOM05D004151 ORTHO05D004775 7.0e-12 75.1 78 59.0
Atru.chr5.2304 Acer truncatum HOM05D004151 ORTHO05D004775 7.0e-12 75.1 78 59.0
BolC9t58722H Brassica oleracea HOM05D004151 ORTHO05D004775 9.1e-12 74.7 150 48.0
Atru.chr6.7 Acer truncatum HOM05D004151 ORTHO05D004775 2.7e-11 73.2 78 57.7
Atru.chr13.534 Acer truncatum HOM05D004151 ORTHO05D004775 5.9e-11 72.0 78 57.7
Atru.chr2.3197 Acer truncatum HOM05D004151 ORTHO05D004775 5.9e-11 72.0 78 57.7
Atru.chr4.2011 Acer truncatum HOM05D004151 ORTHO05D004775 5.9e-11 72.0 78 57.7
ECA246G0128 Erigeron canadensis HOM05D001659 ORTHO05D001659 1.2e-06 57.8 38 68.4


User provided reference genes

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