Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p25910 Brassica napus HOM05D000021 ORTHO05D027986 7.6e-61 236.9 112 100.0
C01p32850 Brassica napus HOM05D000021 ORTHO05D027986 1.1e-35 153.3 80 91.2
BolC1t03226H Brassica oleracea HOM05D000021 ORTHO05D027986 3.2e-35 151.8 80 90.0
BcaC02g11588 Brassica carinata HOM05D000021 ORTHO05D000010 1.1e-14 83.6 52 76.9
C04p13650 Brassica napus HOM05D000021 ORTHO05D000010 1.1e-14 83.6 52 76.9
BolC4t22955H Brassica oleracea HOM05D000021 ORTHO05D000010 1.1e-14 83.6 52 76.9
C07p06010 Brassica napus HOM05D000021 ORTHO05D000010 4.1e-14 81.6 54 68.5
BolC7t41013H Brassica oleracea HOM05D000021 ORTHO05D000010 4.1e-14 81.6 54 68.5
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 7.0e-14 80.9 52 75.0
Carub.0005s1370 Capsella rubella HOM05D000021 ORTHO05D000010 7.0e-14 80.9 78 52.6
BraA08t32276Z Brassica rapa HOM05D000021 ORTHO05D000010 1.2e-13 80.1 52 73.1
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 1.6e-13 79.7 52 75.0
BcaB04g17168 Brassica carinata HOM05D000021 ORTHO05D000010 2.0e-13 79.3 52 73.1
BcaB03g16479 Brassica carinata HOM05D000021 ORTHO05D000010 2.7e-13 79.0 54 66.7
BraA03t13605Z Brassica rapa HOM05D000021 ORTHO05D000010 2.7e-13 79.0 54 68.5
Carub.0005s1366 Capsella rubella HOM05D000021 ORTHO05D000010 2.7e-13 79.0 78 52.6
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 3.5e-13 78.6 52 73.1
Carub.0005s1333 Capsella rubella HOM05D000021 ORTHO05D000010 3.5e-13 78.6 52 69.2
Carub.0005s1367 Capsella rubella HOM05D000021 ORTHO05D000010 3.5e-13 78.6 54 68.5
AL5G26360 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 4.5e-13 78.2 54 68.5
A05p16850 Brassica napus HOM05D000021 ORTHO05D000010 4.5e-13 78.2 54 64.8
BraA05t20586Z Brassica rapa HOM05D000021 ORTHO05D000010 4.5e-13 78.2 54 64.8
A08p02310 Brassica napus HOM05D000021 ORTHO05D000010 5.9e-13 77.8 52 71.2
CARHR155720 Cardamine hirsuta HOM05D000021 ORTHO05D000010 5.9e-13 77.8 52 73.1
C03p55540 Brassica napus HOM05D000021 ORTHO05D000010 7.7e-13 77.4 54 68.5
BolC3t17830H Brassica oleracea HOM05D000021 ORTHO05D000010 7.7e-13 77.4 54 68.5
AL5G26330 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 1.0e-12 77.0 54 66.7
BcaC01g03149 Brassica carinata HOM05D000021 ORTHO05D000010 1.0e-12 77.0 54 68.5
C09p24100 Brassica napus HOM05D000021 ORTHO05D000010 1.0e-12 77.0 52 73.1
BolC9t55326H Brassica oleracea HOM05D000021 ORTHO05D000010 1.0e-12 77.0 52 73.1
AL5G26840 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 1.3e-12 76.6 54 66.7
A06p20020 Brassica napus HOM05D000021 ORTHO05D000010 1.3e-12 76.6 58 65.5
A09p19100 Brassica napus HOM05D000021 ORTHO05D000010 1.3e-12 76.6 52 71.2
BraA06t25088Z Brassica rapa HOM05D000021 ORTHO05D000010 1.3e-12 76.6 58 65.5
BraA09t37529Z Brassica rapa HOM05D000021 ORTHO05D000010 1.3e-12 76.6 52 71.2
AL5G26340 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 1.7e-12 76.3 52 67.3
BcaC04g22053 Brassica carinata HOM05D000021 ORTHO05D000010 2.2e-12 75.9 52 73.1
BolC3t21369H Brassica oleracea HOM05D000021 ORTHO05D000010 2.2e-12 75.9 52 69.2
Sp1g34070 Schrenkiella parvula HOM05D000021 ORTHO05D000010 2.2e-12 75.9 52 71.2
AL5G26350 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 2.9e-12 75.5 52 67.3
CARHR155710 Cardamine hirsuta HOM05D000021 ORTHO05D000010 2.9e-12 75.5 52 73.1
Sp5g16390 Schrenkiella parvula HOM05D000021 ORTHO05D000010 2.9e-12 75.5 54 64.8
AT3G47090 Arabidopsis thaliana HOM05D000021 ORTHO05D000010 3.8e-12 75.1 52 69.2
AT3G47570 Arabidopsis thaliana HOM05D000021 ORTHO05D000010 3.8e-12 75.1 73 52.1
Thhalv10010091m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 3.8e-12 75.1 78 48.7
A10p08940 Brassica napus HOM05D000021 ORTHO05D000010 5.0e-12 74.7 52 67.3
BraA10t42975Z Brassica rapa HOM05D000021 ORTHO05D000010 5.0e-12 74.7 52 67.3
Sp5g16600 Schrenkiella parvula HOM05D000021 ORTHO05D000010 5.0e-12 74.7 54 64.8
AL3G46650 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 6.5e-12 74.3 55 63.6
BcaC01g01801 Brassica carinata HOM05D000021 ORTHO05D000010 6.5e-12 74.3 58 63.8
C03p71800 Brassica napus HOM05D000021 ORTHO05D000010 6.5e-12 74.3 58 63.8
BolC3t19469H Brassica oleracea HOM05D000021 ORTHO05D000010 6.5e-12 74.3 58 63.8
Carub.0005s1372 Capsella rubella HOM05D000021 ORTHO05D000010 6.5e-12 74.3 54 63.0
Carub.0005s1371 Capsella rubella HOM05D000021 ORTHO05D000010 8.5e-12 73.9 52 67.3
AL5G23250 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 1.1e-11 73.6 51 68.6
BcaB01g00903 Brassica carinata HOM05D000021 ORTHO05D000010 1.1e-11 73.6 54 68.5
Thhalv10012566m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 1.1e-11 73.6 56 64.3
BcaC04g21816 Brassica carinata HOM05D000021 ORTHO05D000010 1.5e-11 73.2 54 61.1
C09p27170 Brassica napus HOM05D000021 ORTHO05D000010 1.5e-11 73.2 54 61.1
BolC9t55598H Brassica oleracea HOM05D000021 ORTHO05D000010 1.5e-11 73.2 54 61.1
CARHR155700 Cardamine hirsuta HOM05D000021 ORTHO05D000010 1.5e-11 73.2 54 64.8
CARHR155740 Cardamine hirsuta HOM05D000021 ORTHO05D000010 1.5e-11 73.2 54 64.8
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 1.9e-11 72.8 50 72.0
A09p21330 Brassica napus HOM05D000021 ORTHO05D000010 1.9e-11 72.8 54 61.1
AL4G21250 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 2.5e-11 72.4 52 63.5
Sp2g09620 Schrenkiella parvula HOM05D000021 ORTHO05D000010 3.2e-11 72.0 52 63.5
Aa31LG4G14460 Aethionema arabicum HOM05D000021 ORTHO05D000010 4.2e-11 71.6 54 63.0
AL5G26810 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 4.2e-11 71.6 54 63.0
BcaB07g30925 Brassica carinata HOM05D000021 ORTHO05D000010 4.2e-11 71.6 54 57.4
A08p21980 Brassica napus HOM05D000021 ORTHO05D000010 4.2e-11 71.6 69 53.6
Carub.0004s1293 Capsella rubella HOM05D000021 ORTHO05D000010 4.2e-11 71.6 58 58.6
Carub.0004s1294 Capsella rubella HOM05D000021 ORTHO05D000010 4.2e-11 71.6 55 60.0
Thhalv10010090m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 4.2e-11 71.6 52 65.4
BraA04t17726Z Brassica rapa HOM05D000021 ORTHO05D000010 5.5e-11 71.2 75 48.0
CARHR152670 Cardamine hirsuta HOM05D000021 ORTHO05D000010 7.2e-11 70.9 52 59.6
AT3G47580 Arabidopsis thaliana HOM05D000021 ORTHO05D000010 9.4e-11 70.5 54 61.1
BolC3t19420H Brassica oleracea HOM05D000021 ORTHO05D000010 9.4e-11 70.5 53 60.4
Thhalv10001203m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 9.4e-11 70.5 52 59.6
Aa31LG4G14530 Aethionema arabicum HOM05D000021 ORTHO05D000010 1.2e-10 70.1 52 63.5
BcaC05g28477 Brassica carinata HOM05D000021 ORTHO05D000010 1.2e-10 70.1 52 65.4
C03p13770 Brassica napus HOM05D000021 ORTHO05D000010 1.2e-10 70.1 76 48.7
C05p45620 Brassica napus HOM05D000021 ORTHO05D000010 1.2e-10 70.1 52 65.4
BolC3t13826H Brassica oleracea HOM05D000021 ORTHO05D000010 1.2e-10 70.1 76 48.7
BraA09t37738Z Brassica rapa HOM05D000021 ORTHO05D000010 1.2e-10 70.1 54 57.4
C02p45390 Brassica napus HOM05D000021 ORTHO05D000010 4.7e-10 68.2 54 57.4
C03p38060 Brassica napus HOM05D000021 ORTHO05D000010 4.7e-10 68.2 52 61.5
BolC3t16091H Brassica oleracea HOM05D000021 ORTHO05D000010 4.7e-10 68.2 52 61.5
Thhalv10000757m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 4.7e-10 68.2 52 59.6
AL5G26870 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 6.1e-10 67.8 54 59.3
BcaC01g06526 Brassica carinata HOM05D000021 ORTHO05D000010 1.0e-09 67.0 58 55.2
BcaC03g16262 Brassica carinata HOM05D000021 ORTHO05D021950 1.0e-09 67.0 92 41.3
BolC2t10077H Brassica oleracea HOM05D000021 ORTHO05D021950 1.0e-09 67.0 92 41.3
BcaB01g00425 Brassica carinata HOM05D000021 ORTHO05D000010 1.4e-09 66.6 78 44.9
BolC3t13820H Brassica oleracea HOM05D000021 ORTHO05D000010 1.4e-09 66.6 59 55.9
BcaC03g16706 Brassica carinata HOM05D000021 ORTHO05D000010 1.8e-09 66.2 54 57.4
BcaC09g48434 Brassica carinata HOM05D000021 ORTHO05D000010 1.8e-09 66.2 54 59.3
A02p28710 Brassica napus HOM05D000021 ORTHO05D000010 1.8e-09 66.2 54 57.4
C01p49820 Brassica napus HOM05D000021 ORTHO05D000010 1.8e-09 66.2 54 59.3
C02p40510 Brassica napus HOM05D000021 ORTHO05D021950 1.8e-09 66.2 83 45.8
C04p57730 Brassica napus HOM05D000021 ORTHO05D000010 1.8e-09 66.2 75 46.7
BolC1t04940H Brassica oleracea HOM05D000021 ORTHO05D000010 1.8e-09 66.2 54 59.3
BolC2t10568H Brassica oleracea HOM05D000021 ORTHO05D000010 1.8e-09 66.2 54 57.4
BraA02t07907Z Brassica rapa HOM05D000021 ORTHO05D000010 1.8e-09 66.2 54 57.4
Thhalv10002388m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 1.8e-09 66.2 54 61.1
C03p91720 Brassica napus HOM05D000021 ORTHO05D000010 3.0e-09 65.5 60 56.7
BolC3t21491H Brassica oleracea HOM05D000021 ORTHO05D000010 3.0e-09 65.5 60 58.3
Aa31LG4G14480 Aethionema arabicum HOM05D000021 ORTHO05D000010 4.0e-09 65.1 54 53.7
Aa31LG4G14470 Aethionema arabicum HOM05D000021 ORTHO05D000010 5.2e-09 64.7 58 55.2
BcaB01g04580 Brassica carinata HOM05D000021 ORTHO05D000010 6.8e-09 64.3 58 55.2
BcaB01g04585 Brassica carinata HOM05D000021 ORTHO05D000010 6.8e-09 64.3 58 53.4
A04p21620 Brassica napus HOM05D000021 ORTHO05D000010 6.8e-09 64.3 75 44.0
C03p13730 Brassica napus HOM05D000021 ORTHO05D000010 6.8e-09 64.3 55 54.5
BolC3t13822H Brassica oleracea HOM05D000021 ORTHO05D016122 6.8e-09 64.3 58 53.4
Aa31LG4G14440 Aethionema arabicum HOM05D000021 ORTHO05D000010 8.8e-09 63.9 51 62.7
AL5G26860 Arabidopsis lyrata HOM05D000021 ORTHO05D000010 8.8e-09 63.9 54 59.3
BcaB01g00489 Brassica carinata HOM05D000021 ORTHO05D000010 1.2e-08 63.5 78 43.6
A09p44850 Brassica napus HOM05D000021 ORTHO05D000010 1.2e-08 63.5 78 43.6
BolC8t50308H Brassica oleracea HOM05D000021 ORTHO05D000010 1.2e-08 63.5 78 43.6
BraA09t39947Z Brassica rapa HOM05D000021 ORTHO05D000010 1.2e-08 63.5 78 43.6
BcaB01g04578 Brassica carinata HOM05D000021 ORTHO05D000010 1.5e-08 63.2 69 46.4
C08p31870 Brassica napus HOM05D000021 ORTHO05D000010 1.5e-08 63.2 59 52.5
BcaC01g06523 Brassica carinata HOM05D000021 ORTHO05D016122 2.0e-08 62.8 58 55.2
A03p11730 Brassica napus HOM05D000021 ORTHO05D000010 2.0e-08 62.8 58 51.7
Thhalv10028397m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 2.0e-08 62.8 45 62.2
BcaB01g04587 Brassica carinata HOM05D000021 ORTHO05D000010 4.4e-08 61.6 54 55.6
BcaB01g04575 Brassica carinata HOM05D000021 ORTHO05D000010 5.7e-08 61.2 54 53.7
C03p13760 Brassica napus HOM05D000021 ORTHO05D000010 7.5e-08 60.8 58 51.7
BcaB08g35206 Brassica carinata HOM05D000021 ORTHO05D000010 9.8e-08 60.5 55 50.9
BcaB05g24092 Brassica carinata HOM05D000021 ORTHO05D000010 1.3e-07 60.1 54 53.7
C03p13700 Brassica napus HOM05D000021 ORTHO05D000010 1.3e-07 60.1 54 55.6
BcaB01g04576 Brassica carinata HOM05D000021 ORTHO05D000010 1.7e-07 59.7 58 50.0
BcaB01g04589 Brassica carinata HOM05D000021 ORTHO05D000010 4.8e-07 58.2 54 48.1
Thhalv10017653m.g Eutrema salsugineum HOM05D000021 ORTHO05D000010 1.8e-06 56.2 54 51.9
BcaC01g06522 Brassica carinata HOM05D000021 ORTHO05D000010 4.1e-06 55.1 58 46.6


User provided reference genes

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