Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 1.0e-244 849.7 455 100.0
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 5.5e-243 844.0 455 99.1
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 1.8e-238 828.9 455 97.1
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 2.2e-236 822.0 453 96.2
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 5.6e-227 790.8 465 91.0
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 8.3e-223 776.9 465 89.5
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 1.0e-212 743.4 465 85.8
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 4.3e-211 738.0 465 85.2
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 5.6e-211 737.6 465 84.9
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 8.3e-207 723.8 462 83.5
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 6.2e-202 707.6 464 79.5
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 2.2e-167 592.8 465 66.9
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 4.9e-167 591.7 456 68.4
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.1e-166 590.5 456 68.2
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 7.1e-166 587.8 463 68.3
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 2.1e-165 586.3 459 67.1
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 3.5e-165 585.5 463 66.1
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 3.5e-165 585.5 463 66.1
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 1.1e-163 580.5 464 66.4
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 1.9e-163 579.7 456 66.9
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 9.7e-163 577.4 463 66.1
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 2.2e-162 576.2 462 64.9
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 2.2e-162 576.2 465 65.8
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 3.7e-162 575.5 455 65.9
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 8.2e-162 574.3 462 65.4
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 1.4e-161 573.5 457 66.1
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 2.9e-159 565.8 457 65.9
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 1.1e-158 563.9 465 64.5
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 1.1e-158 563.9 457 63.7
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.6e-157 560.1 463 65.0
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 7.9e-157 557.8 469 63.1
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 6.7e-156 554.7 467 61.2
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 8.7e-156 554.3 459 63.8
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 1.5e-155 553.5 464 64.7
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 1.9e-155 553.1 462 63.9
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 3.3e-155 552.4 493 60.6
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 9.7e-155 550.8 457 64.1
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 3.7e-154 548.9 454 64.3
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 4.8e-154 548.5 455 63.1
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 1.1e-153 547.4 454 63.9
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.4e-153 546.2 457 63.7
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 4.1e-153 545.4 456 64.5
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 1.2e-152 543.9 456 62.3
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.0e-152 543.1 457 63.5
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 2.0e-152 543.1 455 63.5
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 1.7e-151 540.0 461 62.9
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 3.8e-151 538.9 452 62.4
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 3.8e-151 538.9 458 63.3
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 5.0e-151 538.5 454 62.6
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 1.4e-150 537.0 459 62.5
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 7.2e-150 534.6 455 63.1
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 1.6e-149 533.5 466 60.5
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 7.9e-149 531.2 459 61.9
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 1.0e-148 530.8 454 61.9
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 1.8e-148 530.0 466 61.8
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 2.3e-148 529.6 482 58.7
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 2.0e-147 526.6 466 61.4
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 1.3e-146 523.9 495 58.2
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 2.8e-146 522.7 479 59.7
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 3.7e-146 522.3 482 59.1
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 4.8e-146 521.9 494 58.3
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 1.1e-145 520.8 462 61.3
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 2.4e-145 519.6 460 60.4
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 5.3e-145 518.5 454 60.8
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 3.4e-144 515.8 454 60.6
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 3.4e-144 515.8 462 61.0
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 5.9e-144 515.0 461 59.4
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 6.5e-143 511.5 437 62.2
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 8.5e-143 511.1 461 60.5
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 7.2e-142 508.1 472 57.2
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 3.6e-141 505.8 474 58.0
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 2.2e-138 496.5 460 59.6
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 2.2e-138 496.5 463 59.0
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 4.1e-137 492.3 452 57.1
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 7.0e-137 491.5 483 56.3
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 9.1e-137 491.1 465 57.2
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 2.0e-136 490.0 459 58.0
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 4.5e-136 488.8 417 62.1
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 3.8e-135 485.7 419 59.9
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.1e-134 484.2 460 56.7
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 4.7e-133 478.8 460 56.7
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.8e-132 476.9 460 58.3
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 1.2e-131 474.2 466 55.4
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.7e-130 470.3 425 61.2
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 4.8e-130 468.8 416 62.7
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 7.0e-129 464.9 372 65.1
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 2.7e-128 463.0 486 52.7
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 1.6e-125 453.8 478 52.5
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 6.1e-125 451.8 322 73.6
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 3.8e-119 432.6 375 61.9
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.5e-118 430.6 467 51.2
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 2.5e-118 429.9 467 51.8
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 1.4e-116 424.1 454 52.4
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 2.6e-115 419.9 462 50.9
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 3.4e-115 419.5 358 62.8
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 6.3e-114 415.2 321 67.9
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 1.1e-113 414.5 267 87.6
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 3.3e-110 402.9 477 47.0
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 5.8e-107 392.1 220 94.5
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 4.6e-104 382.5 327 61.5
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 2.9e-98 363.2 506 45.3
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 1.4e-97 360.9 323 61.0
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 1.6e-96 357.5 360 53.3
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 2.3e-95 353.6 335 57.3
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 8.3e-90 335.1 327 56.9
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 9.2e-81 305.1 297 59.6
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 2.5e-78 297.0 341 49.3
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 4.7e-77 292.7 483 39.5
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 1.6e-72 277.7 418 41.4
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 4.0e-60 236.5 353 43.6
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 4.2e-57 226.5 487 34.5
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 1.0e-42 178.7 483 33.5
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.0e-39 168.7 156 58.3
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 1.4e-36 158.3 199 50.8
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 5.1e-31 139.8 81 90.1
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 2.0e-30 137.9 82 91.5
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 9.7e-30 135.6 81 88.9
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 3.1e-28 130.6 497 25.8
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 4.2e-25 120.2 370 31.9
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.4e-23 115.2 128 53.9
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 2.8e-21 107.5 84 64.3
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 4.8e-21 106.7 141 46.1
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 1.4e-20 105.1 399 25.8
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 3.8e-18 97.1 430 25.6
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 3.6e-16 90.5 100 50.0
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 2.0e-11 74.7 100 47.0
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 4.0e-07 60.5 72 41.7
SEGI_04453 Sequoiadendron giganteum HOM05D006261 ORTHO05D386652 2.6e-06 57.8 40 70.0
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 9.8e-06 55.8 72 38.9


User provided reference genes

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