ID FN392325; SV 1; linear; genomic DNA; STD; FUN; 7450 BP. XX AC FN392325; XX PR Project:37871; XX DT 25-MAY-2009 (Rel. 100, Created) DT 25-MAY-2009 (Rel. 100, Last updated, Version 1) XX DE Pichia pastoris GS115 rDNA sequence, whole genome shotgun sequence XX KW . XX OS Pichia pastoris OC Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; OC Saccharomycetales; Saccharomycetaceae; Pichia. XX RN [1] RP 1-7450 RA Callewaert N.; RT ; RL Submitted (08-MAY-2009) to the EMBL/GenBank/DDBJ databases. RL Callewaert N., Department for Molecular Biomedical Research, Flanders RL Institute for Biotechnology (VIB) / Gent University, Technologiepark 927, RL Ghent, 9052, BELGIUM. XX RN [2] RA De Schutter K., Lin Y.C., Tiels P., Van Hecke A., Glinka S., RA Weber-Lehmann J., Rouze P., Van de Peer Y., Callewaert N.; RT "Genome sequence of the recombinant protein production host Pichia RT pastoris, a methylotrophic yeast"; RL Nature Biotech 0:0-0(0). XX CC Contact: Nico Callewaert CC Unit for Molecular Glycobiology CC Laboratory for Protein Biochemistry and Biomolecular Engineering CC Department of Biochemistry, Physiology and Microbiology, UGent CC VIB Department for Molecular Biomedical Research, UGent CC Technologiepark 927, B-9052 Gent, Belgium CC Tel: (32)93313630 CC Fax: (32)93313609 CC Email: nico.callewaert@dmbr.vib-UGent.be CC ----------- sequencing/assembly CC Unit for Molecular Glycobiology CC Laboratory for Protein Biochemistry and Biomolecular Engineering CC Department of Biochemistry, Physiology and Microbiology, UGent CC VIB Department for Molecular Biomedical Research, UGent CC ----------- annotation CC Unit for Molecular Glycobiology CC Laboratory for Protein Biochemistry and Biomolecular Engineering CC Department of Biochemistry, Physiology and Microbiology, UGent CC VIB Department for Molecular Biomedical Research, UGent CC CC Laboratory for Bioinformatics and Evolutionary Genomics CC VIB Department of Plant Systems Biology, UGent CC Web site: http://bioinformatics.psb.ugent.be/ CC Bioinformatics Online Genome Annotation System (BOGAS): CC http://bioinformatics.psb.ugent.be/webtools/bogas/ CC ----------- CC * NOTE: finishing of chromosomes in process CC * Final curation of the annotation in progress XX FH Key Location/Qualifiers FH FT source 1..7450 FT /organism="Pichia pastoris" FT /strain="GS115" FT /mol_type="genomic DNA" FT /db_xref="taxon:4922" FT rRNA 151..278 FT /gene="5.8S rRNA" FT /product="5.8S ribosomal RNA" FT rRNA 377..1913 FT /gene="18s rRNA" FT /product="18s ribosomal RNA" FT rRNA 4363..7000 FT /gene="26S rRNA" FT /product="26S ribosomal RNA" FT rRNA 7122..7249 FT /gene="5.8S rRNA" FT /product="5.8S ribosomal RNA" XX SQ Sequence 7450 BP; 1707 A; 1911 C; 1789 G; 2040 T; 3 other; cgaaatcccc tcgttgggtt tcgtttttcc ttcccgccta ttgatatgct aagttcagcg 60 ggtaagtctn agggggcggg gggagggaaa atngaggggt tgacgattta ttagtcatcc 120 tttgtattta aaccacgata gtgagagtag actcacccca ccctccctgt atgcaatgtg 180 cgttcgaaaa ttgatggttc acggcggctt ccaggacgta tcgcggatcg ctgcgttctt 240 catcgttgcg agagccaaga gatccgttgg gaggagattt aaataatctg attgtgtata 300 tgtattatcc tagaagttat actcagtgtg taagtgcgct ccggctagcg ccgaagcttc 360 tttatgatcc ttccgcaggt tcacctacgg aaaccttgtt acgactttta cttcctctaa 420 atgaccaagt ttgtccaagt tcaggctcgc gccctcccaa agcctcacta aaccattcaa 480 tcggtagtag cgacgggcgg tgtgtacaaa gggcagggac gtaatcagcg cgagctgatg 540 actcgcgctt actaggaatt cctcgttgaa gcgcctcttg caaagcgcta tccccagcac 600 gacggagtct aagattcccc ggccatctct ggcaaggact cgctgcctcc gtcagtgtag 660 cgcgcgtgcg gcccagaacg tctaagggca tcacagacct gttattgcct cgcttccgct 720 ggcttgcgcc agttgtcctt ctaagaagat cccccagcaa tgccaggtaa cctagttaaa 780 agccaaggtc tcgttcgtta tcgcaattaa gcagacaaat cactccacca actaagaacg 840 gccatgcacc accacccaca aaatcaagaa agtgctctca tcctgtcaat cctcattgtg 900 tctggacctg gtgagtttcc ccgtgttgag tcaaattaag ccgcaggctc cactcctggt 960 ggtgcccttc cgtcaattcc tttaagtttc agccttgcga ccatactccc cccagaaccc 1020 aaagactttg atttctcgta aggtgccggg gaaggctatt ccccgatccc tagtcggcat 1080 cgtttatggt taagactacg acggtatctg atcatcttcg atcccctaac tttcgttctt 1140 gattaatgaa aacgtccttg gcgaatgctt tcgcagtagt tagtcttggg gcgatccaag 1200 aatttcacct ctgacgcccc aatactgacg cccccgaccg tccctgttaa tcattacgcg 1260 gccccgaacc aacaaaagaa ccgtatcctc ttctgttatt ccatgctaat atattcaact 1320 actgccttga acactctaat ttcctcaaag taacgtccgt tcaactacga gctttttaac 1380 tgcaacaact ttaatatacg ctattggagc tggaattacc gcggctgctg gcaccagact 1440 tgccctccaa ttgttcctcg ttaaggtatt tacgttgtac tcattccaat tacaagacca 1500 aaggccctgt atcgttattt attgtcacta cctccctgtg tcaggattgg gtaatttgcg 1560 cgcctgctgc cttccttgga tgtggtagcc gtctctcagg ctccctctcc ggaatcgaac 1620 ccttattccc cgttacccgt agaaaccatg gtaggcctct atcctaccat cgaaagttga 1680 tagggcagaa atttgaatga accatcctaa gattcgaaaa gttattatga atcaccaaaa 1740 cgaaggtttt atctaataaa tacgcccgag ggctgatcaa gtattagctc tagaattacc 1800 acggttatcc ttgtagcaac actatcaaat aaacgataac tgatttaatg agccattcgc 1860 agtttcaccg tataatgcta tacttagaca tgcatggctt aatctttgag acaagcatat 1920 gactactggc aggatcaacc agataactag gttttgaagc tagataaagt gtttgttccc 1980 ccggctcttt tggagttagt aggcttaagg ccctacgatt atttatctac gtagtaatcc 2040 acttttccct tgtgggcatg ttaggctggc tcgtgtctcc cgaccctttg ccagtgttcc 2100 catgccctgc gttctcagag ttttcactct tctttcatgt atatccttcc gggtcctttt 2160 cgtcgggtgc aaaactagac taggtggata tgcgttgggt ggactagcgg agtgaattgg 2220 tcgactgttt gttaggagtc tggtgtgcgc gagacgtccc taacaaatgt gcgatttcga 2280 cttacgattt ttcagaccgt gagatgggac aagtatccgc gaattgcctt gctgggcatt 2340 ctgggcggga agaatgtttc gctggaaggg gaactttaga ttacagggca aacatgcaaa 2400 tcccaggcgg ggaaagcgct gatttctgcg gttcaggccc tgatccggag tttgagaacc 2460 ccaacatcag aatacaccaa aatgggttga ggtggtgaat gctatgtagt gaacgcttat 2520 gtaagtgagc acttatgtaa gcggttgacc attatgtaag cttgtggttt acgtaaactg 2580 ttatgtaagc tttgaccatt atgtaagctt gtggtttacg taaactgtta tgtaagcttt 2640 gaccattatg taagcttgtg gtttacgtaa actgttatgt aagctttgac cattatgtaa 2700 gcttgtggtt tacgtaaact gttatgtaag ctttggccat tatgtaagct ttaaacactt 2760 atgtaagctc gagcccagta tgtaagcaga ttgacccatt atgtaagctt tgaacactta 2820 tgtaagctcg aaaccggtta ggtaagcagc tttgtaagca atctggacaa ttatgtaagc 2880 gggttacgta aacagttatg taagcagaaa aatttcaaac gacaaaactt ggggtctaca 2940 gacacagtag ccagaagatt gcactaccat tcgactcctc atgacccact ctttcgatcc 3000 atgtagttag gttaccgttt ttcctaatat ttaaggatgt tgaaaattca ttttcatttt 3060 tttcgttttt aagattttct cacaactctt ccaaagatta ctagttgact tttcaaatat 3120 ttagggtatt tttctcactt tttcctagca aactccaatt ggtgggttca gtgcaatgga 3180 gtatcacctt gcaaccacaa cgtaatagct aacttgtggc caccatgtct ggttgtagag 3240 ataattggat tctaatgtgg atcacatgac tactcacgtg tcaaaaaccc aacctgactt 3300 ggcccagctt agcaagaata tttcgaatcc actcttgtgg cctagtggac aactgggaaa 3360 gcttgcgacg cagtcgtttt tggcgatcca ggcgtagtac taggttcgag cctggtcatt 3420 cagatggctc agaacttgag gttgactgag ttccaggttc gagtccagga cgggttggtt 3480 ggtgtcgtcg gctttcggtt ggtctttgat cggcactcgg catgatgatg ttgagactga 3540 cgcgtcgact ggacgtgttt agtacacggt ccacgcgtaa tgtgtggtct tatcttgttg 3600 gtgtcttctt ttgtctggta tcttatctta tctgggatgt gtattatgta agctggagaa 3660 aactctgcgg caagagaaaa aaacaacaag tccaaccgcg ggagactatc cggcgggaga 3720 tcatccggcg agcggagcgc agctgggggg agtcaagatg atggcaagtc caaccgcggg 3780 agactatccg gcgggagatg gtccggcgag cggagcgcag ctggggggtg atgctgaggg 3840 agtcaaggtg aggtcaggtg aaggtctcaa gttcctatag tttttcaagt gcgtgcaagt 3900 gcaagtgcaa gtccaggtgg gacagttttt tggaagtgga ggtgtcacgt gaggacttct 3960 aaggagaatc tcaagtccag gacaatcctc acagatccag gtggtcaatg gaacggcagg 4020 ccacgggagc ggagcaggac agggccgcct gttggactca acaaggaggg tctgtcgggg 4080 tacgacgggg cgtggttgac tggtggagat ttgcgttcac caaccagcgt tgttgcggtt 4140 gcttggtacg cttggtgggt agttgactgg tggttgactg ttggtggaag aatacaagtt 4200 caccaaccag cgtcgctgcg ctcgcttggt accgcttggt taaccgtctt cggaacgagc 4260 cacgaccacc accttcgctg cgctcggtgg ggtctaggct cgtccttcgg tatggaagtt 4320 ccaatcgctc gaccggggct taatctcagc agatcgtgac ggcaaggcca ctcttctgcg 4380 tacaataccc tgtcggggtc aagtcgtggg cgggagattg tggaatgctg ctatgaaata 4440 tatccttctt gtacactcct ccccacccca gcacagattc tgacttagag gcgttcagcc 4500 atgatctgac ggacgtagcg tcggggctgc tttgtcaggc agccccaaaa accaaatgtc 4560 cgaatgaacg gttcctctcg tactaagttc aattactgcc gtggggctca tcagtagggt 4620 aaaactaacc tgtctcacga cggtctaaac ccagctcacg ttccctatta gtgggtgaac 4680 aatccaacgc ttaccgaatt ctgcttcggt atgataggaa gagccgacat cgaagaatca 4740 aaaagcaatg tcgctatgaa cgcttgactg ccacaagcca gttatccctg tggtaacttt 4800 tctggcacct ctagcctcag ggtctgaggg tgtaaaggat cgataggcca cactttcatg 4860 gtttgtattc acactgaaaa tcaaaatcaa gggggcattt gcccttttgc tcggctgaag 4920 atttctgttc ttcatgagcc ccccttggga catctgcgtt atggtttaac agatgtgccg 4980 ccccagccaa actccccgcc tggaggtttc tctgcgatta gtggaggaac tataggggtg 5040 ggggtatttc acgggcgccg ccgaaacggc tcccccctat actacacccc ccatgttccc 5100 ccacggccca aactagagtc aagctcaaca gggtcttctt tccccgctga cgcgccaagc 5160 ccgttccctt ggctgtggtt tcgctagata gtagataggg acagtgggaa tctcgttaat 5220 ccattcatgc gcgtcactaa ttagatgacg aggcatttgg ctaccttaag agagtcatag 5280 ttactcccgc cgtttacccg cgcttggatg aatttcttca ctttgacatt cagagcactg 5340 ggcagaaatc aggtggtgtg cacatccgtt gggactcgca ccaccctatg ttttaattag 5400 acagtcagat tccctttgtc cgtaccagtt ctgggttggt cgataaaagc gacccccaga 5460 gccaatcctt gtcccgaggt tacggatcca atttgccgac ttcccttatc tacattgttc 5520 tatcaccaga ggctgttcac cttggagacc tgctgcggtt gtcagtacgg gcgggggaat 5580 aacataaata aaccaaattt tcacgggatg tcggagatgc gtagacgcac caactagggg 5640 cacgctcttc gggttttact gcccttcgcc ggctaaacca tccaggcaca acgcccttaa 5700 gaagaaaaga aaactcctcc tacgccttcc gccaccgtct ttggccgtct cgtgtcacca 5760 ctcattcccc cggagacaga atcttgactg tcttcccttt cggacgctac cgtacgcgcg 5820 cccttaggac cgtctcaccc acggaggatc tcccttcccg tggaaccttt ccccacttcg 5880 gtcttcaacg gctccgttga atattgctac tgccaccaag atctgcacta ggggcggttc 5940 caggcacctt cacaagcacc cttccacacc acccccacgc ctgcctactc ggagagcttt 6000 ctgttctccg gcagggtata ggtagcacgc ttagcgccat ccattttcag ggctagttca 6060 ttcggccggt gagttgttac acactccttg gcggattccg acttccatgg ccaccgtccg 6120 gctgtccaga tgaaccaaca ccttttgtgg tgtctttgag cgtgcttccg gcaccttaac 6180 cctgcgttcg gttcatcccg catcgccagt tctgcttacc aaaaatggcc cactgagggg 6240 gtctagtatt tgaagaagcc tcactaaagc aggtcttcgc cacacattta aagtttgaga 6300 atgggcggag gtcaaccccc cgtcccccta atcattgctt tacctcatgg aactaaacaa 6360 ccaccccccc gctatcctga gggaaacttc ggcaggaacc agctactaga tggttcgatt 6420 agtctttcgc ccctataccc aaattcgacg atcgatttgc acgtcagaac cgctgcgggc 6480 ctccaccaga gtttcctcag gcttcgccct attcaggcat agttcaccat ctttcgggtc 6540 ccaacagggg tgctggctca ctcaccacca aaggtgagtg tcgctttcgc ttcgcgcttg 6600 gatgttcgtc cgcacactcg caccccggtt agactccttg gtccgtgttt caagacgggc 6660 gcaggaccac ttgtcgtggc cttgccttcc ctccccccaa tttcacgcac tgtttcactc 6720 tcttttcaaa gttcttttca tctttccatc actgtacttg tttgctatcg gtctctcgct 6780 gatatttagt ctttgatgga ccctaccacc tttagagctg cattcccaaa caactcgact 6840 ctgtcggctg ggaagattgg tcgtgtgcca cggggctatc accctctttg gcggccgttc 6900 caggcgactt gtgcacattg cctctcccaa ccacgtcaat acttcaaagg tggacttttg 6960 ccgcttcact cgccgttact gaggcaatcc ctgttggttt cttttcctcc gcttattgat 7020 atgcttaagt tcagcgggta atctgagggg gcgggggaga aaatgagggg tgacggtttt 7080 attagtcatc ctttgtattt aaaccacgat tgtgagagta gactcacccc accctccctg 7140 tatgcaatgt gcgttcgaaa attgatggtt cacggcggct tccaggacgt atcgcggatc 7200 gctgcgttct tcatcgttgc gagagccaag agatccgttg ggaggagatt taaataatct 7260 gattgtgtat atgtattatc ctagaagtta tactcagtgt gtaagtgcgc tccggctagc 7320 gccgaagctt ctttatgatc cttccgcagg ttcaacccna acggaaacct tgtttacgac 7380 ttttacttcc tctaaatgac caaagtttgt accaaagttc aggctccggc cgccccgtcc 7440 ccaaagccct 7450 //