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# Directory Content #
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* bacterial_scaffolds.txt
* bathy09feb2011_ALL_cds.tfa
* bathy09feb2011_ALL_prot.tfa
* Bathycoccus_EMBL_annotations.tar.gz
* Bathycoccus_gene_structure.csv
* Bathycoccus_genomic_FINAL_renumerote100111.tfa.gz
* nonbacterial_scaffolds.txt


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# Comments #
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* bacterial_scaffolds.txt: a file containg the names of all scaffolds !!!!PRESUMED!!!! to be non-bathycoccus (determined via Horizontal Gene Transfer Analysis).

* nonbacterial_scaffolds.txt: a file containing the names of all scaffold which are sure to be of bathycoccus origin.

* bathy09feb2011_ALL_*: files containg the coding and protein sequences for this annotation.

* bathy09feb2011_EMBL_annotations.tar.gz: file containg EMBL files for all annotated scaffolds.

* Bathycoccus_genomic_FINAL_renumerote100111.tfa.gz: the final genomic draft

* Bathycoccus_gene_structure.csv: a comma-separated file containg the structure of each Bathycoccus gene (a dump from the BOGAS database).
	->the fields consist of: "id", "locus_id", "structure", "start", "stop", "number_of_exons", "strand", "quality" and "modification_date"