File name Description md5 Digex_bed_LATEST.tar.gz bed files of fonio genes 7270debb7354082b8b3faba89dae0a51 Digex_cds_LATEST.tfa.gz CDS sequence of fonio genes b0ae239a91973debcace360e7ff09f1d Digex_mRNA_LATEST.tfa.gz transcripts sequences of fonio genes eec6c991d92ebbb0899b08285d21eee2 Digex_prot_LATEST.tfa.gz proteins sequence of fonio genes 17973fb8cde5b63025030f5260adc6da Digex_gff3_LATEST.tar.gz annotation file (gff3 format) c3fe07cf8f81486544b624c6640f65e7 Digex_gtf_LATEST.tar.gz annotation file (gtf format) e189bd8b4e39676490b0659c3b4acf49 Digex_gff_LATEST.tar.gz annotation file (gff format) 708ad720c7a3ae483c9a4fa10df67195 Digex_embl_LATEST.tar.gz annotation file (embl format) 65aa42138f6e5c98e9b1846a3fc13a80 Digex_gene_info_LATEST.txt.gz the info about all of genes, incuding gene ID, Strand and location e72c7bafc3210515f2a6836910a23eff Digitaria_exilis.sort.bam.bai index file of the bam file (Digitaria_exilis.sort.bam) 2622e38da59dabd59242eab70979bb66 Digitaria_exilis.sort.bam the bam file of mapping RNA -seq data to the genome df64559cb2027d758728852458b156bb Supplementary_data_article.zip Supplement results bc71b45936e057367a6fae60f36dabfe FN_CANU_PILON.v1.0.ID_fixed_clean.fasta final genome assembly of fonio dbd7caa1de6c3443b1bb30e7907b00eb the files in the Supplementary_data_article.zip ./GW2A_newick.gz Tree for GW2A from various species 7362fa700de2d9cba4bdf397ccb60c3e ./BUSCO_outputs.zip BUSCO outputs for proteins c748909dd6827b02c6f02944bf3846cc ./Dwarf_genes.msa.treefile.gz Multiple sequence alignment for dwarf gene from various species e750b83c1026044f93483376c98c4bb7 ./seed_size_gene_family_GW2A_with_wheat.msa.treefile.gz Tree for gene involved in seed size,various species including wheat 8e95700dfeac49204592da046929c76e ./Dwarf_gene_newick.gz Tree for the dwarf gene from various species f34e1ef277b0f89dd73837f617765e72 ./SBRAC_family.msa.treefile.gz Multiple sequence alignment for SBRAC from various species 9fe7270cfc6a43dcac751afe193f9cfd ./SBRAC_newick.gz Tree for SBRAC from various species 4862d7082945e4dd162112c0117cf9ca ./BUSCO_results.txt.gz results for BUSCO analysis 8b7bbe416978b3b7e2ea7bde39b1556e